[
-
{- "prefLabel": "Collection",
- "synonym": [ ],
-
"definition": [- "A collection is a container for genomic data. A collection may contain information about genomic data including -- but not limited to -- contents of GFF3, GTF, GVF and VCF files. The latter are better represented by \"File\" class instances, whereas the result of unions or intersections between different \"File\" class instances should be captured within this format-independent \"Collection\" class. When importing data whose provenance is not file based, instances of \"Collection\" should be utilized (e.g., database exports)."
],- "obsolete": false,
- "@id": "http://www.biointerchange.org/gfvo#Collection",
- "@type": "http://www.w3.org/2002/07/owl#Class",
-
"links": {- "self": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23Collection",
- "ontology": "https://data.agroportal.lirmm.fr/ontologies/GFVO",
- "children": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23Collection/children",
- "parents": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23Collection/parents",
- "descendants": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23Collection/descendants",
- "ancestors": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23Collection/ancestors",
- "instances": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23Collection/instances",
- "tree": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23Collection/tree",
- "notes": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23Collection/notes",
- "mappings": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23Collection/mappings",
- "ui": "http://agroportal.lirmm.fr/ontologies/GFVO?p=classes&conceptid=http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23Collection",
-
"@context": {- "self": "http://www.w3.org/2002/07/owl#Class",
- "ontology": "http://data.bioontology.org/metadata/Ontology",
- "children": "http://www.w3.org/2002/07/owl#Class",
- "parents": "http://www.w3.org/2002/07/owl#Class",
- "descendants": "http://www.w3.org/2002/07/owl#Class",
- "ancestors": "http://www.w3.org/2002/07/owl#Class",
- "instances": "http://data.bioontology.org/metadata/Instance",
- "tree": "http://www.w3.org/2002/07/owl#Class",
- "notes": "http://data.bioontology.org/metadata/Note",
- "mappings": "http://data.bioontology.org/metadata/Mapping",
- "ui": "http://www.w3.org/2002/07/owl#Class"
}
},-
"@context": {}
},-
{- "prefLabel": "Information Content Entity",
- "synonym": [ ],
-
"definition": [- "An information content entity is a data structure or data type that requires background information or specific domain knowledge to be interpreted correctly. Information content entities can be of simple structure, such as \"Label\" that only requires the application of \"has value\" to be meaningful, or, they can be of complex structure such as \"Locus\" which becomes meaningful with multiple FALDO annotations."
],- "obsolete": false,
- "@id": "http://www.biointerchange.org/gfvo#InformationContentEntity",
- "@type": "http://www.w3.org/2002/07/owl#Class",
-
"links": {- "self": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23InformationContentEntity",
- "ontology": "https://data.agroportal.lirmm.fr/ontologies/GFVO",
- "children": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23InformationContentEntity/children",
- "parents": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23InformationContentEntity/parents",
- "descendants": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23InformationContentEntity/descendants",
- "ancestors": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23InformationContentEntity/ancestors",
- "instances": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23InformationContentEntity/instances",
- "tree": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23InformationContentEntity/tree",
- "notes": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23InformationContentEntity/notes",
- "mappings": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23InformationContentEntity/mappings",
- "ui": "http://agroportal.lirmm.fr/ontologies/GFVO?p=classes&conceptid=http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23InformationContentEntity",
-
"@context": {- "self": "http://www.w3.org/2002/07/owl#Class",
- "ontology": "http://data.bioontology.org/metadata/Ontology",
- "children": "http://www.w3.org/2002/07/owl#Class",
- "parents": "http://www.w3.org/2002/07/owl#Class",
- "descendants": "http://www.w3.org/2002/07/owl#Class",
- "ancestors": "http://www.w3.org/2002/07/owl#Class",
- "instances": "http://data.bioontology.org/metadata/Instance",
- "tree": "http://www.w3.org/2002/07/owl#Class",
- "notes": "http://data.bioontology.org/metadata/Note",
- "mappings": "http://data.bioontology.org/metadata/Mapping",
- "ui": "http://www.w3.org/2002/07/owl#Class"
}
},-
"@context": {}
},-
{- "prefLabel": "Object",
- "synonym": [ ],
-
"definition": [- "An object is a concrete entity that realizes a concept and encapsulates data associated with said concept. Objects are typically representing tangible entities, such as \"Chromosome\", \"DNA Sequence\", but also objects such as \"Identifier\", \"Average Coverage\" or other computational or mathematical entities.\n\nSince an object describes a large body of entities, its use is discouraged. Where applicable, one of its subclasses should be used instead."
],- "obsolete": false,
- "@id": "http://www.biointerchange.org/gfvo#Object",
- "@type": "http://www.w3.org/2002/07/owl#Class",
-
"links": {- "self": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23Object",
- "ontology": "https://data.agroportal.lirmm.fr/ontologies/GFVO",
- "children": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23Object/children",
- "parents": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23Object/parents",
- "descendants": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23Object/descendants",
- "ancestors": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23Object/ancestors",
- "instances": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23Object/instances",
- "tree": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23Object/tree",
- "notes": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23Object/notes",
- "mappings": "https://data.agroportal.lirmm.fr/ontologies/GFVO/classes/http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23Object/mappings",
- "ui": "http://agroportal.lirmm.fr/ontologies/GFVO?p=classes&conceptid=http%3A%2F%2Fwww.biointerchange.org%2Fgfvo%23Object",
-
"@context": {- "self": "http://www.w3.org/2002/07/owl#Class",
- "ontology": "http://data.bioontology.org/metadata/Ontology",
- "children": "http://www.w3.org/2002/07/owl#Class",
- "parents": "http://www.w3.org/2002/07/owl#Class",
- "descendants": "http://www.w3.org/2002/07/owl#Class",
- "ancestors": "http://www.w3.org/2002/07/owl#Class",
- "instances": "http://data.bioontology.org/metadata/Instance",
- "tree": "http://www.w3.org/2002/07/owl#Class",
- "notes": "http://data.bioontology.org/metadata/Note",
- "mappings": "http://data.bioontology.org/metadata/Mapping",
- "ui": "http://www.w3.org/2002/07/owl#Class"
}
},-
"@context": {}
}
]