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{- "prefLabel": "prokaryotic cell",
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{- "prefLabel": "photosynthetic cell",
- "synonym": [ ],
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"definition": [- "see PMID:21177950, The making of a photosynthetic animal.",
- "A cell that can perform photosynthesis, in which carbohydrates are synthesized from carbon dioxide and water, using light as the energy source."
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{- "prefLabel": "progenitor cell of endocrine pancreas",
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"synonym": [- "pancreatic endocrine progenitor",
- "pancreatic islet progenitor cell"
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{- "prefLabel": "kidney cell",
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"definition": [- "A cell that is part of a kidney."
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{- "prefLabel": "stem cell",
-
"synonym": [],-
"definition": [- "This term applies to metazoan. For plant stem cells, consider using PO:0004011 ‘initial cell’ or its parent PO:0004010 ‘meristematic cell’.",
- "A relatively undifferentiated cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized cells."
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"links": {- "self": "https://data.agroportal.lirmm.fr/ontologies/EFO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000034",
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}
},-
{- "prefLabel": "non-terminally differentiated cell",
-
"synonym": [],-
"definition": [- "define using PATO mulit-potent or oligopotent?",
- "A precursor cell with a limited number of potential fates."
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{- "prefLabel": "epithelial cell",
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"synonym": [],-
"definition": [- "A cell that is usually found in a two-dimensional sheet with a free surface. The cell has a cytoskeleton that allows for tight cell to cell contact and for cell polarity where apical part is directed towards the lumen and the basal part to the basal lamina."
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"synonym": [],-
"definition": [- "From FMA: 9.07.2001: Endothelial cell has always been classified as a kind of epithelial cell, specifically a squamous cell but that is not true. First, endothelial cell can either be squamous or cuboidal (e.g. high-endothelial cell) and secondly, it has different embryological derivation (mesodermal) than a true epithelial cell (ectodermal and endodermal). The basis for present classification is the fact that it comprises the outermost layer or lining of anatomical structures (location-based) but a better structural basis for the differentia is the cytoskeleton of the cell. Endothelial cell has vimentin filaments while an epithelial cell has keratin filaments. [Onard].",
- "An endothelial cell comprises the outermost layer or lining of anatomical structures and can be squamous or cuboidal. In mammals, endothelial cell has vimentin filaments and is derived from the mesoderm."
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}
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{- "prefLabel": "adipocyte",
-
"synonym": [- "adipose cell",
- "fat cell"
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"definition": [- "A fat-storing cell found mostly in the abdominal cavity and subcutaneous tissue of mammals. Fat is usually stored in the form of triglycerides."
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{- "prefLabel": "secretory cell",
- "synonym": [ ],
-
"definition": [- "A cell that specializes in controlled release of one or more substances."
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"links": {- "self": "https://data.agroportal.lirmm.fr/ontologies/EFO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000151",
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"@context": {- "self": "http://www.w3.org/2002/07/owl#Class",
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}
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{- "prefLabel": "electrically active cell",
- "synonym": [ ],
-
"definition": [- "A cell whose function is determined by the generation or the reception of an electric signal."
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{- "prefLabel": "extraembryonic cell",
- "synonym": [ ],
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"definition": [- "Any cell that is part of some extraembryonic structure."
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"definition": [- "Any cell that in taxon some Fungi."
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"definition": [- "The reproductive cell in multicellular organisms."
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{- "prefLabel": "primordial germ cell",
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"synonym": [- "gonocyte",
- "primitive germ cell"
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"definition": [- "A primordial germ cell is a diploid germ cell precursors that transiently exist in the embryo before they enter into close association with the somatic cells of the gonad and become irreversibly committed as germ cells."
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"links": {- "self": "https://data.agroportal.lirmm.fr/ontologies/EFO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000670",
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{- "prefLabel": "hematopoietic cell",
-
"synonym": [- "haematopoietic cell",
- "haemopoietic cell",
- "hemopoietic cell"
],-
"definition": [- "A cell of a hematopoietic lineage."
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"links": {- "self": "https://data.agroportal.lirmm.fr/ontologies/EFO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000988",
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},-
{- "prefLabel": "neoplastic cell",
-
"synonym": [- "tumor cell",
- "tumour cell"
],-
"definition": [- "https://github.com/obophenotype/cell-ontology/issues/448",
- "An abnormal cell exhibiting dysregulation of cell proliferation or programmed cell death and capable of forming a neoplasm, an aggregate of cells in the form of a tumor mass or an excess number of abnormal cells (liquid tumor) within an organism."
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},-
{- "prefLabel": "bone marrow cell",
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"definition": [- "MH consider whether bone marrow cells are bone cells in the structural sense vs. being part of bone organ sense.",
- "A cell found in the bone marrow. This can include fibroblasts, macrophages, adipocytes, osteoblasts, osteoclasts, endothelial cells and hematopoietic cells."
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}
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{- "prefLabel": "neural cell",
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"definition": [- "A cell that is part of the nervous system."
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"@context": {- "self": "http://www.w3.org/2002/07/owl#Class",
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{- "prefLabel": "embryonic cell (metazoa)",
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"definition": [],- "cui": [ ],
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"@context": {- "self": "http://www.w3.org/2002/07/owl#Class",
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{- "prefLabel": "cardiocyte",
-
"synonym": [],-
"definition": [- "From Onard of the FMA: Cardiac muscle cell or cardiac myocyte is a striated muscle cell. Cardiocyte on the other hand is any cell in the heart which includes cells other than muscle cells (e.g. endothelial cell of endocardium). Unless there is a consensus among anatomists that cardiocytes refer only to muscle cells, we will treat them as a general class of cells in the heart.",
- "A cell located in the heart, including both muscle and non muscle cells."
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}
},-
{- "prefLabel": "mesenchymal cell",
-
"synonym": [],-
"definition": [- "A non-polarised cell precursor cell that is part of some mesenchyme, is associated with the cell matrix but is not connected to other cells and is capable of migration."
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- "cui": "http://bioportal.bioontology.org/ontologies/umls/cui",
- "inScheme": "http://www.w3.org/2004/02/skos/core#inScheme",
- "created": "http://purl.org/dc/terms/created",
- "modified": "http://purl.org/dc/terms/modified",
- "@language": "en"
}
},-
{- "prefLabel": "cultured cell",
- "synonym": [ ],
-
"definition": [- "Note that this class was re-labeled to 'cultured cell' instead of 'cell line cell', as it intent was clarified to cover any cultured cells of multicellular and unicellular organisms. This includes cells actively being cultured, or cells that have been cultured but are stored in a quiescent state for future use. In having been cultured, cells must establish homeostasis and often replicate in a foreign environment. Accomodation of this stress initiates a selection of cells fit for such challenges, wherein necessary adaptive biochemical and.or genetic changes can occur. These changes can set them apart from the in vivo cells from which they derive, and such changes will typically accumulate and change over increasing time in culture.",
- "A cell in vitro that is or has been maintained or propagated as part of a cell culture."
],- "cui": [ ],
- "semanticType": [ ],
- "obsolete": false,
- "created": null,
- "modified": null,
- "memberOf": [ ],
- "inScheme": [ ],
- "@id": "http://purl.obolibrary.org/obo/CL_0000010",
- "@type": "http://www.w3.org/2002/07/owl#Class",
-
"links": {- "self": "https://data.agroportal.lirmm.fr/ontologies/EFO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000010",
- "ontology": "https://data.agroportal.lirmm.fr/ontologies/EFO",
- "children": "https://data.agroportal.lirmm.fr/ontologies/EFO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000010/children",
- "parents": "https://data.agroportal.lirmm.fr/ontologies/EFO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000010/parents",
- "descendants": "https://data.agroportal.lirmm.fr/ontologies/EFO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000010/descendants",
- "ancestors": "https://data.agroportal.lirmm.fr/ontologies/EFO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000010/ancestors",
- "instances": "https://data.agroportal.lirmm.fr/ontologies/EFO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000010/instances",
- "tree": "https://data.agroportal.lirmm.fr/ontologies/EFO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000010/tree",
- "notes": "https://data.agroportal.lirmm.fr/ontologies/EFO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000010/notes",
- "mappings": "https://data.agroportal.lirmm.fr/ontologies/EFO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000010/mappings",
- "ui": "http://agroportal.lirmm.fr/ontologies/EFO?p=classes&conceptid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FCL_0000010",
-
"@context": {- "self": "http://www.w3.org/2002/07/owl#Class",
- "ontology": "http://data.bioontology.org/metadata/Ontology",
- "children": "http://www.w3.org/2002/07/owl#Class",
- "parents": "http://www.w3.org/2002/07/owl#Class",
- "descendants": "http://www.w3.org/2002/07/owl#Class",
- "ancestors": "http://www.w3.org/2002/07/owl#Class",
- "instances": "http://data.bioontology.org/metadata/Instance",
- "tree": "http://www.w3.org/2002/07/owl#Class",
- "notes": "http://data.bioontology.org/metadata/Note",
- "mappings": "http://data.bioontology.org/metadata/Mapping",
- "ui": "http://www.w3.org/2002/07/owl#Class"
}
},-
"@context": {- "@vocab": "http://data.bioontology.org/metadata/",
- "prefLabel": "http://www.w3.org/2004/02/skos/core#prefLabel",
- "synonym": "http://www.w3.org/2004/02/skos/core#altLabel",
- "definition": "http://www.w3.org/2004/02/skos/core#definition",
- "obsolete": "http://www.w3.org/2002/07/owl#deprecated",
- "semanticType": "http://bioportal.bioontology.org/ontologies/umls/hasSTY",
- "cui": "http://bioportal.bioontology.org/ontologies/umls/cui",
- "inScheme": "http://www.w3.org/2004/02/skos/core#inScheme",
- "created": "http://purl.org/dc/terms/created",
- "modified": "http://purl.org/dc/terms/modified",
- "@language": "en"
}
}
]
}