37
56
16
http://purl.obolibrary.org/obo/VariO_0316
wiki
transversion
'wiki' SubClassOf 'DNA substitution'
'wiki' SubClassOf 'RNA substitution'
http://purl.obolibrary.org/obo/VariO_0313
transition
'transition' SubClassOf 'part_of' some 'RNA substitution'
'transition' SubClassOf 'DNA substitution'
'transition' SubClassOf http://www.w3.org/2002/07/owl#topObjectProperty some 'RNA substitution'
'transition' SubClassOf 'RNA substitution'
http://purl.obolibrary.org/obo/VariO_0436
matured RNA
'matured RNA' SubClassOf 'RNA variation of non-genetic origin'
'matured RNA' SubClassOf 'modified RNA'
http://purl.obolibrary.org/obo/VariO_0424
effect on DNA-RNA hybrid
'effect on DNA-RNA hybrid' SubClassOf 'part_of' some 'effect on RNA tertiary structure'
'effect on DNA-RNA hybrid' SubClassOf 'part_of' some 'effect on DNA tertiary structure'
'effect on DNA-RNA hybrid' SubClassOf 'effect on DNA form'
'effect on DNA-RNA hybrid' SubClassOf 'effect on RNA tertiary structure'
http://purl.obolibrary.org/obo/VariO_0115
effect on protein packing
'effect on protein packing' SubClassOf 'effect on amino acid size'
'effect on protein packing' SubClassOf 'effect on protein tertiary structure'
http://purl.obolibrary.org/obo/VariO_0433
effect on D loop
'effect on D loop' SubClassOf 'effect on intermolecular DNA triple helix'
http://purl.obolibrary.org/obo/VariO_0334
edited RNA
'edited RNA' SubClassOf 'RNA variation of non-genetic origin'
'edited RNA' SubClassOf 'RNA variation classification'
http://purl.obolibrary.org/obo/VariO_0340
RNA substitution editing
'RNA substitution editing' SubClassOf 'RNA modification by editing'
http://purl.obolibrary.org/obo/VariO_0344
RNA degradation by decay
'RNA degradation by decay' SubClassOf 'effect on RNA degradation'
http://purl.obolibrary.org/obo/VariO_0360
RNA base modification
'RNA base modification' SubClassOf 'RNA modification'
http://purl.obolibrary.org/obo/VariO_0361
RNA nucleoside sugar modification
'RNA nucleoside sugar modification' SubClassOf 'RNA modification'
'RNA nucleoside sugar modification' SubClassOf 'variation affecting RNA structure'
http://purl.obolibrary.org/obo/VariO_0366
splicing at recursive splice site
'splicing at recursive splice site' SubClassOf 'cis splicing'
'splicing at recursive splice site' SubClassOf http://purl.obolibrary.org/obo/VariO_0508
http://purl.obolibrary.org/obo/VariO_0367
five prime cis splice site
'five prime cis splice site' SubClassOf 'cis splicing'
'five prime cis splice site' SubClassOf http://purl.obolibrary.org/obo/VariO_0508
http://purl.obolibrary.org/obo/VariO_0370
three prime cis splice site
'three prime cis splice site' SubClassOf 'cis splicing'
'three prime cis splice site' SubClassOf http://purl.obolibrary.org/obo/VariO_0508
http://purl.obolibrary.org/obo/VariO_0373
cryptic splice site activation
'cryptic splice site activation' SubClassOf 'RNA splicing'
'cryptic splice site activation' SubClassOf http://purl.obolibrary.org/obo/VariO_0504
http://purl.obolibrary.org/obo/VariO_0411
alternatively spliced RNA
'alternatively spliced RNA' SubClassOf 'part_of' some 'alternative form of RNA'
'alternatively spliced RNA' SubClassOf 'alternative form of RNA'
http://purl.obolibrary.org/obo/VariO_0404
group II intron
'group II intron' SubClassOf 'non-protein coding RNA'
'group II intron' SubClassOf http://purl.obolibrary.org/obo/VariO_0472
http://purl.obolibrary.org/obo/VariO_0403
group I intron
'group I intron' SubClassOf 'non-protein coding RNA'
'group I intron' SubClassOf http://purl.obolibrary.org/obo/VariO_0472
http://purl.obolibrary.org/obo/VariO_0395
self-cleavage by ribozyme activity
'self-cleavage by ribozyme activity' SubClassOf 'variation affecting RNA structure'
http://purl.obolibrary.org/obo/VariO_0187
copy number variation
'copy number variation' SubClassOf 'chromosomal deletion'
'copy number variation' SubClassOf 'chromosomal amplification'
http://purl.obolibrary.org/obo/VariO_0175
effect on DNA triple helix
'effect on DNA triple helix' SubClassOf 'effect on DNA tertiary structure'
'effect on DNA triple helix' SubClassOf 'effect on DNA form'
http://purl.obolibrary.org/obo/VariO_0173
effect on nucleic acid G-quadruplex
'effect on nucleic acid G-quadruplex' SubClassOf 'effect on four-stranded RNA'
'effect on nucleic acid G-quadruplex' SubClassOf 'effect on four-stranded DNA'
http://purl.obolibrary.org/obo/VariO_0406
RNA degradation by Staufen-mediated decay
'RNA degradation by Staufen-mediated decay' SubClassOf 'RNA degradation by decay'
http://purl.obolibrary.org/obo/VariO_0432
effect on T loop
'effect on T loop' SubClassOf 'effect on DNA-RNA hybrid'
'effect on T loop' SubClassOf 'effect on DNA double helix'
http://purl.obolibrary.org/obo/VariO_0359
RNA modification
'RNA modification' SubClassOf 'RNA modification by maturation'
http://purl.obolibrary.org/obo/VariO_0358
RNA three prime end processing
'RNA three prime end processing' SubClassOf 'RNA modification by maturation'
http://purl.obolibrary.org/obo/VariO_0357
RNA five prime capping
'RNA five prime capping' SubClassOf 'RNA modification by maturation'
http://purl.obolibrary.org/obo/VariO_0355
RNA polyadenylation
'RNA polyadenylation' SubClassOf 'RNA modification by maturation'
http://purl.obolibrary.org/obo/VariO_0353
non-coding region of protein coding mRNA
'non-coding region of protein coding mRNA' SubClassOf 'protein coding RNA'
'non-coding region of protein coding mRNA' SubClassOf 'non-protein coding RNA'
http://purl.obolibrary.org/obo/VariO_0158
nucleosome positioning
'nucleosome positioning' SubClassOf 'chromatin structure variation'
'nucleosome positioning' SubClassOf 'epigenetic DNA modification'
http://purl.obolibrary.org/obo/VariO_0348
RNA modification by nonsense-associated altered splicing
'RNA modification by nonsense-associated altered splicing' SubClassOf 'variation affecting RNA structure'
http://purl.obolibrary.org/obo/VariO_0347
RNA degradation by nonsense-mediated decay
'RNA degradation by nonsense-mediated decay' SubClassOf 'RNA degradation by decay'
http://purl.obolibrary.org/obo/VariO_0346
RNA degradation by no-go decay
'RNA degradation by no-go decay' SubClassOf 'RNA degradation by decay'
http://purl.obolibrary.org/obo/VariO_0345
RNA degradation by nonstop decay
'RNA degradation by nonstop decay' SubClassOf 'RNA degradation by decay'
http://purl.obolibrary.org/obo/VariO_0342
RNA deletion editing
'RNA deletion editing' SubClassOf 'RNA modification by editing'
http://purl.obolibrary.org/obo/VariO_0341
RNA insertion editing
'RNA insertion editing' SubClassOf 'RNA modification by editing'
http://purl.obolibrary.org/obo/VariO_0339
RNA modification by editing
'RNA modification by editing' SubClassOf 'variation affecting RNA structure'
http://purl.obolibrary.org/obo/VariO_0511
effect on non-sequential splicing
'effect on non-sequential splicing' SubClassOf 'effect on mode of splicing'
http://purl.obolibrary.org/obo/VariO_0510
effect on co-transcriptional splicing
'effect on co-transcriptional splicing' SubClassOf 'effect on mode of splicing'
http://purl.obolibrary.org/obo/VariO_0512
effect on recursive splicing
'effect on recursive splicing' SubClassOf 'effect on mode of splicing'
http://purl.obolibrary.org/obo/VariO_0509
effect on mode of splicing
'effect on mode of splicing' SubClassOf 'effect on RNA splicing'
http://purl.obolibrary.org/obo/VariO_0508
affected splice site
'affected splice site' SubClassOf 'effect on cis splicing'
http://purl.obolibrary.org/obo/VariO_0489
chromatin related non-coding RNA
'chromatin related non-coding RNA' SubClassOf 'location or origin of non-coding RNA'
http://purl.obolibrary.org/obo/VariO_0493
ribosomal RNA
'ribosomal RNA' SubClassOf 'translation related non-coding RNA'
http://purl.obolibrary.org/obo/VariO_0492
short non-coding RNA
'short non-coding RNA' SubClassOf 'size of non-coding RNA'
http://purl.obolibrary.org/obo/VariO_0491
size of non-coding RNA
'size of non-coding RNA' SubClassOf 'non-protein coding RNA'
http://purl.obolibrary.org/obo/VariO_0490
centromeric non-coding RNA
'centromeric non-coding RNA' SubClassOf 'location or origin of non-coding RNA'
http://purl.obolibrary.org/obo/VariO_0477
regulatory RNA
'regulatory RNA' SubClassOf 'functional non-coding RNA'
http://purl.obolibrary.org/obo/VariO_0478
microRNA
'microRNA' SubClassOf 'regulatory RNA'
http://purl.obolibrary.org/obo/VariO_0483
RNA editing related RNA
'RNA editing related RNA' SubClassOf 'functional non-coding RNA'
http://purl.obolibrary.org/obo/VariO_0482
X-chromosome inactivation center RNA
'X-chromosome inactivation center RNA' SubClassOf 'functional non-coding RNA'
http://purl.obolibrary.org/obo/VariO_0481
signal recognition particle RNA
'signal recognition particle RNA' SubClassOf 'functional non-coding RNA'
http://purl.obolibrary.org/obo/VariO_0480
piwi-interacting RNA
'piwi-interacting RNA' SubClassOf 'regulatory RNA'
http://purl.obolibrary.org/obo/VariO_0473
spliceosomal intron
'spliceosomal intron' SubClassOf 'intron'
http://purl.obolibrary.org/obo/VariO_0472
self-splicing intron
'self-splicing intron' SubClassOf 'intron'
http://purl.obolibrary.org/obo/VariO_0471
intron
'intron' SubClassOf 'translation related non-coding RNA'
http://purl.obolibrary.org/obo/VariO_0470
small subunit ribosomal RNA
'small subunit ribosomal RNA' SubClassOf 'ribosomal RNA'
http://purl.obolibrary.org/obo/VariO_0466
retrotransposon RNA intermediate
'retrotransposon RNA intermediate' SubClassOf 'functional non-coding RNA'
http://purl.obolibrary.org/obo/VariO_0498
effect on RNA modification
'effect on RNA modification' SubClassOf 'effect on post transcriptional RNA modification'
http://purl.obolibrary.org/obo/VariO_0499
modified mRNA nucleotide
'modified mRNA nucleotide' SubClassOf 'alternative form of mRNA'
http://purl.obolibrary.org/obo/VariO_0469
large subunit ribosomal RNA
'large subunit ribosomal RNA' SubClassOf 'ribosomal RNA'
http://purl.obolibrary.org/obo/VariO_0462
circular RNA
'circular RNA' SubClassOf 'protein coding RNA'
http://purl.obolibrary.org/obo/VariO_0461
mRNA
'mRNA' SubClassOf 'pre-mRNA'
http://purl.obolibrary.org/obo/VariO_0460
pre-mRNA
'pre-mRNA' SubClassOf 'protein coding RNA'
http://purl.obolibrary.org/obo/VariO_0501
RNA fragment
'RNA fragment' SubClassOf 'location or origin of non-coding RNA'
http://purl.obolibrary.org/obo/VariO_0504
inclusion of cryptic exon
'inclusion of cryptic exon' SubClassOf 'effect on cis splicing'
http://purl.obolibrary.org/obo/VariO_0459
satelletite genome
'satelletite genome' SubClassOf 'RNA genome'
http://purl.obolibrary.org/obo/VariO_0488
mitochondrial non-coding RNA
'mitochondrial non-coding RNA' SubClassOf 'location or origin of non-coding RNA'
http://purl.obolibrary.org/obo/VariO_0458
viroid genome
'viroid genome' SubClassOf 'RNA genome'
http://purl.obolibrary.org/obo/VariO_0479
small intervening RNA
'small intervening RNA' SubClassOf 'regulatory RNA'
http://purl.obolibrary.org/obo/VariO_0457
RNA virus genome
'RNA virus genome' SubClassOf 'RNA genome'
http://purl.obolibrary.org/obo/VariO_0456
RNA genome
'RNA genome' SubClassOf 'protein coding RNA'
http://purl.obolibrary.org/obo/VariO_0467
translation related non-coding RNA
'translation related non-coding RNA' SubClassOf 'functional non-coding RNA'
http://purl.obolibrary.org/obo/VariO_0463
antisense RNA
'antisense RNA' SubClassOf 'regulatory RNA'
http://purl.obolibrary.org/obo/VariO_0468
transfer RNA
'transfer RNA' SubClassOf 'translation related non-coding RNA'
http://purl.obolibrary.org/obo/VariO_0474
intron retention
'intron retention' SubClassOf 'effect on cis splicing'
http://purl.obolibrary.org/obo/VariO_0475
telomerase RNA
'telomerase RNA' SubClassOf 'functional non-coding RNA'
http://purl.obolibrary.org/obo/VariO_0476
catalytic RNA
'catalytic RNA' SubClassOf 'functional non-coding RNA'
http://purl.obolibrary.org/obo/VariO_0484
DNA editing related RNA
'DNA editing related RNA' SubClassOf 'functional non-coding RNA'
http://purl.obolibrary.org/obo/VariO_0485
spliceosomal RNA
'spliceosomal RNA' SubClassOf 'functional non-coding RNA'
http://purl.obolibrary.org/obo/VariO_0464
non-coding sense RNA
'non-coding sense RNA' SubClassOf 'regulatory RNA'
http://purl.obolibrary.org/obo/VariO_0494
long non-coding RNA
'long non-coding RNA' SubClassOf 'size of non-coding RNA'
http://purl.obolibrary.org/obo/VariO_0495
very long non-coding RNA
'very long non-coding RNA' SubClassOf 'size of non-coding RNA'
http://purl.obolibrary.org/obo/VariO_0500
effect on RNA pseudoknot
'effect on RNA pseudoknot' SubClassOf 'effect on RNA secondary structure'
http://purl.obolibrary.org/obo/VariO_0503
loss of exon fragment
'loss of exon fragment' SubClassOf 'effect on cis splicing'
http://purl.obolibrary.org/obo/VariO_0513
mutually exclusive exon
'mutually exclusive exon' SubClassOf 'effect on cis splicing'
http://purl.obolibrary.org/obo/VariO_0465
functional non-coding RNA
'functional non-coding RNA' SubClassOf 'non-protein coding RNA'
http://purl.obolibrary.org/obo/VariO_0502
exon skipping
'exon skipping' SubClassOf 'effect on cis splicing'
http://purl.obolibrary.org/obo/VariO_0486
location or origin of non-coding RNA
'location or origin of non-coding RNA' SubClassOf 'non-protein coding RNA'
http://purl.obolibrary.org/obo/VariO_0487
nuclear non-coding RNA
'nuclear non-coding RNA' SubClassOf 'location or origin of non-coding RNA'
http://purl.obolibrary.org/obo/VariO_0496
exon
'exon' SubClassOf 'mRNA'
http://purl.obolibrary.org/obo/VariO_0497
alternatively terminated mRNA
'alternatively terminated mRNA' SubClassOf 'alternative form of mRNA'
http://purl.obolibrary.org/obo/VariO_0505
inclusion of intron fragment
'inclusion of intron fragment' SubClassOf 'effect on cis splicing'
http://purl.obolibrary.org/obo/VariO_0340
RNA substitution editing
'RNA substitution editing' SubClassOf 'RNA modification by editing'
http://purl.obolibrary.org/obo/VariO_0344
RNA degradation by decay
'RNA degradation by decay' SubClassOf 'effect on RNA degradation'
http://purl.obolibrary.org/obo/VariO_0360
RNA base modification
'RNA base modification' SubClassOf 'RNA modification'
http://purl.obolibrary.org/obo/VariO_0395
self-cleavage by ribozyme activity
'self-cleavage by ribozyme activity' SubClassOf 'variation affecting RNA structure'
http://purl.obolibrary.org/obo/VariO_0406
RNA degradation by Staufen-mediated decay
'RNA degradation by Staufen-mediated decay' SubClassOf 'RNA degradation by decay'
http://purl.obolibrary.org/obo/VariO_0359
RNA modification
'RNA modification' SubClassOf 'RNA modification by maturation'
http://purl.obolibrary.org/obo/VariO_0358
RNA three prime end processing
'RNA three prime end processing' SubClassOf 'RNA modification by maturation'
http://purl.obolibrary.org/obo/VariO_0357
RNA five prime capping
'RNA five prime capping' SubClassOf 'RNA modification by maturation'
http://purl.obolibrary.org/obo/VariO_0355
RNA polyadenylation
'RNA polyadenylation' SubClassOf 'RNA modification by maturation'
http://purl.obolibrary.org/obo/VariO_0348
RNA modification by nonsense-associated altered splicing
'RNA modification by nonsense-associated altered splicing' SubClassOf 'variation affecting RNA structure'
http://purl.obolibrary.org/obo/VariO_0347
RNA degradation by nonsense-mediated decay
'RNA degradation by nonsense-mediated decay' SubClassOf 'RNA degradation by decay'
http://purl.obolibrary.org/obo/VariO_0346
RNA degradation by no-go decay
'RNA degradation by no-go decay' SubClassOf 'RNA degradation by decay'
http://purl.obolibrary.org/obo/VariO_0345
RNA degradation by nonstop decay
'RNA degradation by nonstop decay' SubClassOf 'RNA degradation by decay'
http://purl.obolibrary.org/obo/VariO_0342
RNA deletion editing
'RNA deletion editing' SubClassOf 'RNA modification by editing'
http://purl.obolibrary.org/obo/VariO_0341
RNA insertion editing
'RNA insertion editing' SubClassOf 'RNA modification by editing'
http://purl.obolibrary.org/obo/VariO_0339
RNA modification by editing
'RNA modification by editing' SubClassOf 'variation affecting RNA structure'