format-version: 1.2 date: 09:05:2017 16:54 saved-by: rexnelson auto-generated-by: OBO-Edit 2.1.1-beta9 default-namespace: SOY [Term] id: SOY:0000000 name: Soybean Growth and Trait Ontology V10 revision 1.4 [Term] id: SOY:0000001 name: 0 Germination namespace: soybean_whole_plant_growth_stage def: "Growth resumption of a seed embryo." [SoyWGR:001] comment: Stages 0 Germination to 1 Leaf production represent VE stage. Equivalent to BBCH stage 0 Germination. synonym: "BBCH 0: Germination" EXACT [SoyWGR:003] synonym: "PO:0007057 0: Germination" EXACT [PO:0007057] xref: GO:GO\:0009845 "seed germination" xref: PO:PO\:0007057 "0 seed germination stage" xref: SoyWGR:003 "BBCH Soybean Munger et al. 1997. Phenological Growth Stages of the Soybean Plant (Glycine max (L.) MERR.) Codification and Description according to the General BBCH Scale. Journal of Agronomy and Crop Science 179:209 - 217" is_a: SOY:0000097 ! Soybean Whole Plant Growth Stages [Term] id: SOY:0000002 name: 1 Leaf Production namespace: soybean_whole_plant_growth_stage synonym: "PO:0007014 leaf production" RELATED [] xref: GO:GO\:0090014 "leaflet formation" xref: PO:PO\:0001050 "leaf development stage" is_a: SOY:0000097 ! Soybean Whole Plant Growth Stages [Term] id: SOY:0000003 name: 2 Axillary Shoot Formation namespace: soybean_whole_plant_growth_stage def: "Axillary shoots arising from the main stem." [SoyWGR:001] synonym: "PO:0007073 Formation of axillary shoot" RELATED [] xref: GO:GO\:0010223 "secondary shoot formation" xref: PO:PO\:0007073 "2 formation of axillary shoot stage" is_a: SOY:0000097 ! Soybean Whole Plant Growth Stages [Term] id: SOY:0000004 name: 3 Stem Elongation namespace: soybean_whole_plant_growth_stage synonym: "PO:0007089 Stem elongation" RELATED [] xref: PO:PO\:0007089 "stem elongation stage" is_a: SOY:0000097 ! Soybean Whole Plant Growth Stages [Term] id: SOY:0000005 name: 4 Inflorescence Formation namespace: soybean_whole_plant_growth_stage def: "The stage at which a soybean plant is beginning to produce an inflorescence at an axilla." [SoyWGR:001] synonym: "PO:0007047 Inflorescence formation" EXACT [PO:0007047] xref: GO:GO\:0010229 "inflorescence development" xref: PO:PO\:0001083 "inflorescence development stage" is_a: SOY:0000097 ! Soybean Whole Plant Growth Stages [Term] id: SOY:0000006 name: 6 Flowering namespace: soybean_whole_plant_growth_stage def: "Stage of soybean growth where flowers are beginning to develop." [SoyWGR:001] synonym: "PO:0007016 Flowering" EXACT [PO:0007016] xref: PO:PO\:0007016 "whole plant flowering stage" is_a: SOY:0000097 ! Soybean Whole Plant Growth Stages [Term] id: SOY:0000007 name: 7-8 Fruit Formation and Maturation namespace: soybean_whole_plant_growth_stage def: "Formation of the pod and seeds after flowering." [SoyWGR:001] synonym: "PO:0007035" RELATED [] xref: GO:\:GO\:0010154 "fruit development" xref: PO:PO\:0001002 "fruit development stage" xref: PO:PO\:0007042 "whole plant fruit formation stage" is_a: SOY:0000097 ! Soybean Whole Plant Growth Stages [Term] id: SOY:0000008 name: 9 Senescence namespace: soybean_whole_plant_growth_stage def: "Beginning of the death process in a plant or plant part." [SoyWGR:004] synonym: "PO:0007017 Beginning of death processes in plant or plant part" RELATED [] xref: GO:GO\:0010260 "organ senescence" is_a: SOY:0000097 ! Soybean Whole Plant Growth Stages [Term] id: SOY:0000009 name: 00 Dry Seed namespace: soybean_whole_plant_growth_stage def: "Low moisture content mature seed." [SoyWGR:001] comment: Is synonymous with PO:0001040 Dry seed. Is also synonymous with BBCH stage 00 Dry seed. synonym: "BBCH00 000" RELATED [SoyWGR:003] synonym: "PO:0001040 Dry seed" EXACT [PO:000140] synonym: "PO:0007055 Dry seed" RELATED [] is_a: SOY:0000001 ! 0 Germination xref_unknown: SoyWGR:003 "BBCH Soybean Munger et al. 1997. Phenological Growth Stages of the Soybean Plant (Glycine max (L.) MERR.) Codification and Description according to the General BBCH Scale. Journal of Agronomy and Crop Science 179:209 - 217" [Term] id: SOY:0000010 name: 06 Elongation of radical and root hair formation namespace: soybean_whole_plant_growth_stage def: "Radical elongates and root hairs visible." [SoyWGR:001] comment: Radical elongates and root hairs visible. synonym: "BBCH 06 006 Elongation of radicle, formation of root hairs" RELATED [] is_a: SOY:0000001 ! 0 Germination [Term] id: SOY:0000011 name: 05 Radical Emergence from Seed Coat namespace: soybean_whole_plant_growth_stage def: "Radical is just visible protruding from the seed." [SoyWGR:001] comment: Radical is just visible protruding from the seed. Part of VE stage development. Synonymous with PO:0007015 Radicle emergence from seed coat. synonym: "05 005 BBCH growth stage" RELATED [] synonym: "PO:0007015 Radicle emergence from seed coat" RELATED [] is_a: SOY:0000001 ! 0 Germination xref_unknown: SoyWGR:003 "BBCH Soybean Munger et al. 1997. Phenological Growth Stages of the Soybean Plant (Glycine max (L.) MERR.) Codification and Description according to the General BBCH Scale. Journal of Agronomy and Crop Science 179:209 - 217" [Term] id: SOY:0000012 name: 07 Shoot Emergence namespace: soybean_whole_plant_growth_stage def: "Emergence of the hypocotyl and cotyledons from the seed coat." [SoyWGR:001] comment: Emergence of the hypocotyl and cotyledons from the seed coat. Part of VE stage development. synonym: "BCCH:07 007 Hypocotyl with cotyledons breaking through seed coat" RELATED [] synonym: "PO:0007030 07 shoot emergence" RELATED [] is_a: SOY:0000001 ! 0 Germination [Term] id: SOY:0000013 name: 0.07.01 Cotyledons and Hypocotyl Emerge namespace: soybean_whole_plant_growth_stage def: "The hypocotyl and cotyledons break through the seed coat." [SoyWGR:001] comment: The hypocotyl and cotyledons break through the seed coat. synonym: "BCCH:07 007 Hypocotyl with cotyledons breaking through seed coat" RELATED [] is_a: SOY:0000012 ! 07 Shoot Emergence [Term] id: SOY:0000014 name: 1.00 Cotyledon Visible PO:0007049, BBCH 10 100 namespace: soybean_whole_plant_growth_stage def: "Growth from emergence of cotyledon above the soil surface to unfurling of unifoliolate leaves. Corresponds to the VE stage." [SoyWGR:002, SoyWGR:005] comment: Growth from emergence of cotyledon above the soil surface to unfurling of unifoliolate leaves. Corresponds to the VE stage. Also referred to as the "Cracking" stage. Broadly synonymous with BBCH 10 100. synonym: "BBCH 10 100" BROAD [] synonym: "Cracking Stage" RELATED [] synonym: "VE stage" RELATED [] xref: PO:PO\:0007049 "cotyledon emergence stage" is_a: SOY:0000002 ! 1 Leaf Production [Term] id: SOY:0000015 name: 1.01 Unifoliolate Leaves Unfolded PO:0007094, BBCH 11 101 namespace: soybean_whole_plant_growth_stage def: "Growth from the unfolding of the unifolate leaves until the unfurling of the first trifoliolate leaf. Corresponds to the VC stage." [SoyWGR:002, SoyWGR:005] comment: Growth from the unfolding of the unifolate leaves until the unfurling of the first trifoliolate leaf. Corresponds to the VC stage. Synonymous with BBCH 11 101 first pair of true leaves unfolded on the main stem. synonym: "BCCH:10 101 unifoliolate leaves unfolded" RELATED [SoyWGR:003] synonym: "PO:0007094 1.01 one leaf or a pair of leaves unfolded" RELATED [PO:0007094] synonym: "VC stage" RELATED [SoyWGR:002] xref: PO:PO\:0007094 "LP.01 one leaf visible stage" is_a: SOY:0000002 ! 1 Leaf Production xref_unknown: SoyWGR:002 "Stages of Soybean Development Fehr WR. and Caviness CE. 1977 Cooperative Extension Service Publication SR80 Iowa State University Ames IA 50011" xref_unknown: SoyWGR:003 "BBCH Soybean Munger et al. 1997. Phenological Growth Stages of the Soybean Plant (Glycine max (L.) MERR.) Codification and Description according to the General BBCH Scale. Journal of Agronomy and Crop Science 179:209 - 217" [Term] id: SOY:0000016 name: 1.02 First Trifoliolate Leaf Unfolded PO:0007094, BBCH 12 102 namespace: soybean_whole_plant_growth_stage def: "Growth from unfolding of the first trifoliolate leaf until unfurling of the 2nd trifoliolate leaf on the main stem. Corresponds to V1 stage." [SoyWGR:001, SoyWGR:005] comment: Growth from unfolding of the first trifoliolate leaf until unfurling of the 2nd trifoliolate leaf on the main stem. Corresponds to V1 stage. Broadly synonymous with BBCH 12 102 trifoliolate leaf on the 2nd node unfolded. synonym: "BBCH:12 102" RELATED [] synonym: "PO:0007098 Two pairs of leaves unfolded" EXACT [PO:0007098] synonym: "V1 stage" RELATED [] xref: PO:PO\:0007094 "LP.01 one leaf visible stage" is_a: SOY:0000002 ! 1 Leaf Production [Term] id: SOY:0000017 name: 1.03 2nd Trifoliolate Leaf Unfolded PO:0007106, BBCH 13 103 namespace: soybean_whole_plant_growth_stage def: "Growth from unfolding of 2nd trifoliolate leaf to unfolding of the 3rd trifoliolate leaf on the main stem. Corresponds to V2 growth stage." [SoyWGR:005] comment: Growth from unfolding of 2nd trifoliolate leaf to unfolding of the 3rd trifoliolate leaf on the main stem. Corresponds to V2 growth stage. Broadly synonymous with BBCH 13 103 trifoliolate leaf on the 3rd node unfolded. synonym: "BCCH:13 103" RELATED [] synonym: "PO:0007106 Three leaves unfolded" RELATED [PO:0007106] synonym: "V2 stage" RELATED [] xref: PO:PO\:0007106 "LP.03 three leaves visible stage" is_a: SOY:0000002 ! 1 Leaf Production xref_unknown: SoyWGR:001 "Curator - RTN" xref_unknown: SoyWGR:002 "Stages of Soybean Development Fehr WR. and Caviness CE. 1977 Cooperative Extension Service Publication SR80 Iowa State University Ames IA 50011" [Term] id: SOY:0000018 name: 1.04 3rd Trifoliolate Leaf Unfolded PO:0007115, BBCH 14 104 namespace: soybean_whole_plant_growth_stage def: "Growth from unfolding of 3rd trifoliolate leaf to the unfolding of the 4th trifoliolate leaf on the main stem. Corresponds to stage V3." [SoyWGR:005] comment: Growth from unfolding of 3rd trifoliolate leaf to the unfolding of the 4th trifoliolate leaf on the main stem. Corresponds to stage V3. Broadly synonymous with BBCH 14 104 trifoliolate leaf on the 5th node on the main stem unfolded. synonym: "BBCH:14 004 trifoliate leaf on 4th node" RELATED [] synonym: "PO:0007115 Four leaves unfolded" RELATED [PO:0007115] synonym: "Stage V3" RELATED [] xref: PO:PO\:0007115 "LP.O4 four leaves visible stage" is_a: SOY:0000002 ! 1 Leaf Production xref_unknown: SoyWGR:001 "Curator - RTN" xref_unknown: SoyWGR:002 "Stages of Soybean Development Fehr WR. and Caviness CE. 1977 Cooperative Extension Service Publication SR80 Iowa State University Ames IA 50011" [Term] id: SOY:0000019 name: 1.05 4th Trifoliolate Leaf Unfolded PO:0007065, BBCH 15 105 namespace: soybean_whole_plant_growth_stage def: "Growth stage from unfolding of the 4th trifoliolate leaf to the unfolding of the 5th trifoliolate leaf on the main stem. Corresponds to stage V4." [SoyWGR:005] comment: Growth stage from unfolding of the 4th trifoliolate leaf to the unfolding of the 5th trifoliolate leaf on the main stem. Corresponds to stage V3. Broadly synonymous with BBCH 15 105 trifoliolate leaf on the 5th node on the main stem unfolded. synonym: "BCCH:15 105" RELATED [] synonym: "PO:0007065 Five leaves unfolded" EXACT [PO:0007065] synonym: "Stage V4" RELATED [] xref: PO:PO\:0007065 "LP.05 five leaves visible stage" is_a: SOY:0000002 ! 1 Leaf Production xref_unknown: SoyWGR:002 "Stages of Soybean Development Fehr WR. and Caviness CE. 1977 Cooperative Extension Service Publication SR80 Iowa State University Ames IA 50011" [Term] id: SOY:0000020 name: 1.06 5th Trifoliolate Leaf Unfolded PO:0007123, BBCH 16 106 namespace: soybean_whole_plant_growth_stage def: "Growth from unfolding of the 5th trifoliolate leaf to the unfolding of the 6th trifoliolate leaf on the main stem. Corresponds to stage V5." [] comment: Growth from unfolding of the 5th trifoliolate leaf to the unfolding of the 6th trifoliolate leaf on the main stem. Corresponds to stage V5. Broadly synonymous with BBCH 16 106 trifoliolate leaf on the 6th node on the main stem unfolded. synonym: "BCCH:16 106" RELATED [] synonym: "PO:0007123 Six leaves unfolded" RELATED [PO:0007123\:] synonym: "Stage V5" EXACT [] xref: PO:PO\:0007123 "LP.06 six leaves visible stage" is_a: SOY:0000002 ! 1 Leaf Production xref_unknown: SoyWGR:002 "Stages of Soybean Development Fehr WR. and Caviness CE. 1977 Cooperative Extension Service Publication SR80 Iowa State University Ames IA 50011" xref_unknown: SoyWGR:005 "Pedersen 2004 Soybean Growth and Development Iowa State University Extension Service Publication PM 1945, Ames, Iowa 50011" [Term] id: SOY:0000021 name: 1.07 6th Trifoliolate Leaf Unfolded PO:0007063, BBCH 17 107 namespace: soybean_whole_plant_growth_stage def: "Growth from unfolding of the 6th trifoliolate leaf to the unfolding of the 7th trifoliolate leaf on the main stem. Corresponds to stage V6." [SoyWGR:005] comment: Growth from unfolding of the 6th trifoliolate leaf to the unfolding of the 7th trifoliolate leaf on the main stem. Corresponds to stage V6. Broadly synonymous with BBCH 17 107 trifoliolate leaf on the 7th node on the main stem unfolded. synonym: "BCCH:17 107" RELATED [] synonym: "PO:0007063 Seven leaves unfolded" EXACT [PO:0007063] synonym: "Stage V6" EXACT [] xref: PO:PO\:0007063 "LP.07 seven leaves visible stage" is_a: SOY:0000002 ! 1 Leaf Production [Term] id: SOY:0000022 name: 1.08 7th Trifoliolate Leaf Unfolded PO:0007095, BBCH 18 108 namespace: soybean_whole_plant_growth_stage def: "Growth from unfolding of the 7th trifoliolate leaf until the unfolding of the 8th trifoliolate leaf on the main stem. Corresponds to stage V7." [SoyWGR:005] comment: Growth from unfolding of the 7th trifoliolate leaf until the unfolding of the 8th trifoliolate leaf on the main stem. Corresponds to stage V7. Broadly synonymous with BBCH 18 108 trifoliolate leaf on the 8th node on the main stem unfolded. synonym: "BCCH:18 108" RELATED [] synonym: "PO:0007095 Eight leaves unfolded" EXACT [PO:0007095] synonym: "Stage V7" EXACT [] xref: PO:PO\:0007095 "LP.08 eight leaves visible stage" is_a: SOY:0000002 ! 1 Leaf Production [Term] id: SOY:0000023 name: 1.09 8th Trifoliolate Leaf Unfolded PO:0007101, BBCH 19 109 namespace: soybean_whole_plant_growth_stage def: "Growth from unfolding of the 8th trifoliolate leaf until the unfolding of the 9th trifoliolate leaf on the main stem. Corresponds to stage V8." [SoyWGR:005] comment: Growth from unfolding of the 8th trifoliolate leaf until the unfolding of the 9th trifoliolate leaf on the main stem. Corresponds to stage V8. Broadly synonymous with BBCH 19 109 trifoliolate leaf on the 9th node on the main stem unfolded. synonym: "BCCH:19 109" RELATED [] synonym: "PO:0007101 Nine leaves unfolded" EXACT [PO:0007101] synonym: "Stage V8" EXACT [] xref: PO:PO\:0007101 "LP.09 nine leaves visible stage" is_a: SOY:0000002 ! 1 Leaf Production [Term] id: SOY:0000024 name: 1.10 9th Trifoliolate Leaf Unfolded PO:0007103, BBCH 19 110 namespace: soybean_whole_plant_growth_stage def: "Growth from the unfolding of the 9th trifoliolate leaf until the unfolding of the 10th trifoliolate leaf on main stem. Corresponds to stage V9." [SoyWGR:005] comment: Growth from the unfolding of the 9th trifoliolate leaf until the unfolding of the 10th trifoliolate leaf on main stem. Corresponds to stage V9. Broadly synonymous with BBCH 19 110 trifoliolate leaf on the 10th node on the main stem unfolded. synonym: "BCCH:19 110" RELATED [] synonym: "PO:0007103 Ten leaves unfolded" EXACT [PO:0007103] synonym: "Stage V9" EXACT [] xref: PO:PO\:0007103 "LP.10 ten leaves visible stage" is_a: SOY:0000002 ! 1 Leaf Production [Term] id: SOY:0000025 name: 1.11 10th Trifoliolate Leaf Unfolded PO:0007116, BBCH 19 111 namespace: soybean_whole_plant_growth_stage def: "Growth from the unfolding of the 10th trifoliolate leaf until the unfolding of the 11th trifoliolate leaf on the main stem. Corresponds to stage V10." [SoyWGR:005] comment: Growth from the unfolding of the 10th trifoliolate leaf until the unfolding of the 11th trifoliolate leaf on the main stem. Corresponds to stage V10. Broadly synonymous with BBCH 19 111 trifoliolate leaf on the 11th node on the main stem unfolded. synonym: "BCCH:19 111" RELATED [] synonym: "PO:0007116 Eleven leaves unfolded" EXACT [PO:0007116] synonym: "Stage V10" EXACT [] xref: PO:PO\:0007116 "eleven leaves visible stage" is_a: SOY:0000002 ! 1 Leaf Production [Term] id: SOY:0000026 name: 1.12 11th Trifoliolate Leaf Unfolded PO:0007064, BBCH 19 112 namespace: soybean_whole_plant_growth_stage def: "Growth from the unfolding of the 11th trifoliolate leaf until the 12th trifoliolate leaf on the main stem. Corresponds to stage V11." [SoyWGR:005] comment: Growth from the unfolding of the 11th trifoliolate leaf until the 12th trifoliolate leaf on the main stem. Corresponds to stage V11. Broadly synonymous with BBCH 19 112 trifoliolate leaf on the 12th node on the main stem unfolded. synonym: "BCCH:19 112" RELATED [] synonym: "PO:0007064 12 leaves unfolded" EXACT [PO:0007064] synonym: "Stage V11" EXACT [] xref: PO:PO\:0007064 "LP.12 twelve leaves visible stage" is_a: SOY:0000002 ! 1 Leaf Production [Term] id: SOY:0000027 name: 1.13 12th Trifoliolate Leaf Unfolded PO:0007083, BBCH 19 113 namespace: soybean_whole_plant_growth_stage def: "Growth from the unfolding of the 12th trifoliolate leaf until the unfolding of the 13th trifoliolate leaf on the main stem. Corresponds to Stage V12." [SoyWGR:005] comment: Growth from the unfolding of the 12th trifoliolate leaf until the unfolding of the 13th trifoliolate leaf on the main stem. Corresponds to Stage V12. Broadly synonymous with BBCH 19 113 trifoliolate leaf on the 13th node on the main stem unfolded. synonym: "BCCH:19 113" RELATED [] synonym: "Stage V12" EXACT [] xref: PO:PO\:0007083 "LP.13 thirteen leaves visible stage" is_a: SOY:0000002 ! 1 Leaf Production [Term] id: SOY:0000028 name: 1.14 13th Trifoliolate Leaf Unfolded PO:0007085, BBCH 19 114 namespace: soybean_whole_plant_growth_stage def: "Growth from the unfolding of the 13th trifoliolate leaf until the unfolding of the 14th trifoliolate leaf on the main stem. Corresponds to Stage V13." [SoyWGR:005] comment: Growth from the unfolding of the 13th trifoliolate leaf until the unfolding of the 14th trifoliolate leaf on the main stem. Corresponds to Stage V13. Broadly synonymous with BBCH 19 114 trifoliolate leaf on the 14th node on the main stem unfolded. synonym: "BCCH:19 114" RELATED [] synonym: "PO:0007085 14 leaves unfolded" EXACT [PO:0007085] synonym: "Stage V13" EXACT [] xref: PO:PO\:0007085 "LP.14 fourteen leaves visible stage" is_a: SOY:0000002 ! 1 Leaf Production [Term] id: SOY:0000029 name: 1.15 14th Trifoliolate Leaf Unfolded PO:0007104, BBCH 19 115 namespace: soybean_whole_plant_growth_stage def: "Growth from the unfolding of the 14th trifoliolate leaf until the unfolding of the 15th trifoliolate leaf on the main stem. Corresponds to Stage V14." [SoyWGR:005] comment: Growth from the unfolding of the 14th trifoliolate leaf until the unfolding of the 15th trifoliolate leaf on the main stem. Corresponds to Stage V14. Broadly synonymous with BBCH 19 115 trifoliolate leaf on the 15th node on the main stem unfolded. synonym: "BCCH:19 115" RELATED [] synonym: "Stage V14" EXACT [] xref: PO:PO\:0007104 "LP.15 fifteen leaves visible stage" is_a: SOY:0000002 ! 1 Leaf Production [Term] id: SOY:0000030 name: 1.16 15th Trifoliolate Leaf Unfolded PO:0007119, BBCH 19 116 namespace: soybean_whole_plant_growth_stage def: "Growth from the unfolding of the 15th trifoliolate leaf until the unfolding of the 16th trifoliolate leaf on the main stem. Corresponds to Stage V15." [SoyWGR:005] comment: Growth from the unfolding of the 15th trifoliolate leaf until the unfolding of the 16th trifoliolate leaf on the main stem. Corresponds to Stage V15. Broadly synonymous with BBCH 19 116 trifoliolate leaf on the 16th node on the main stem unfolded. synonym: "BCCH:19 116" RELATED [] synonym: "PO:0007119 16 leaves unfolded" EXACT [PO:0007119] synonym: "Stage V15" EXACT [] xref: PO:PO\:0007119 "LP.16 sixteen leaves visible stage" is_a: SOY:0000002 ! 1 Leaf Production [Term] id: SOY:0000031 name: 1.17 16th trifoliate leaf unfolded PO:0007067, BBCH 19 117 namespace: soybean_whole_plant_growth_stage def: "Growth from the unfolding of the 16th trifoliolate leaf until the unfolding of the 17th trifoliolate leaf on the main stem. Corresponds to Stage V16." [SoyWGR:005] comment: Growth from the unfolding of the 16th trifoliolate leaf until the unfolding of the 17th trifoliolate leaf on the main stem. Corresponds to Stage V16. Broadly synonymous with BBCH 19 117 trifoliolate leaf on the 17th node on the main stem unfolded. synonym: "BCCH:19 117" RELATED [] synonym: "PO:0007067 17 leaves unfolded" EXACT [PO:0007067] synonym: "Stage V16" EXACT [] xref: PO:PO\:0007067 "LP.17 seventeen leaves visible stage" is_a: SOY:0000002 ! 1 Leaf Production [Term] id: SOY:0000032 name: 1.18 17th Trifoliolate Leaf Unfolded PO:0007072, BBCH 19 118 namespace: soybean_whole_plant_growth_stage def: "Growth from the unfolding of the 17th trifoliolate leaf until the unfolding of the 18th trifoliolate leaf on the main stem. Corresponds to Stage V17." [SoyWGR:005] comment: Growth from the unfolding of the 17th trifoliolate leaf until the unfolding of the 18th trifoliolate leaf on the main stem. Corresponds to Stage V17. Broadly synonymous with BBCH 19 118 trifoliolate leaf on the 18th node on the main stem unfolded. synonym: "BCCH:19 118" RELATED [] synonym: "PO:0007072 18 leaves unfolded" EXACT [PO:0007072] synonym: "Stage V17" EXACT [] xref: PO:PO\:0007072 "LP.18 eighteen leaves visible stage" is_a: SOY:0000002 ! 1 Leaf Production [Term] id: SOY:0000033 name: 1.19 18th Trifoliolate Leaf Unfolded PO:0007120, BBCH 19 119 namespace: soybean_whole_plant_growth_stage def: "Growth from the unfolding of the 18th trifoliolate leaf until the unfolding of the 19th trifoliolate leaf on the main stem. Corresponds to Stage V18." [SoyWGR:005] comment: Growth from the unfolding of the 18th trifoliolate leaf until the unfolding of the 19th trifoliolate leaf on the main stem. Corresponds to Stage V18. Broadly synonymous with BBCH 19 119 trifoliolate leaf on the 19th node on the main stem unfolded. synonym: "BCCH:19 119" RELATED [] synonym: "PO:0007120 19 leaves unfolded" EXACT [PO:0007120] synonym: "Stage V18" EXACT [] xref: PO:PO\:0007120 "LP.19 nineteen leaves visible stage" is_a: SOY:0000002 ! 1 Leaf Production [Term] id: SOY:0000034 name: 1.20 19th Trifoliolate Leaf Unfolded PO:0007082 namespace: soybean_whole_plant_growth_stage def: "Growth from the unfolding of the 19th trifoliolate leaf until the unfolding of the 20th trifoliolate leaf on the main stem. Corresponds to Stage V19." [SoyWGR:005] comment: Growth from the unfolding of the 19th trifoliolate leaf until the unfolding of the 20th trifoliolate leaf on the main stem. Corresponds to Stage V19. synonym: "PO:0007082 20 or more leaves unfolded" EXACT [PO:0007082] synonym: "Stage V19" EXACT [] xref: PO:PO\:0007082 "LP.20 twenty or more leaves whorls visible stage" is_a: SOY:0000002 ! 1 Leaf Production [Term] id: SOY:0000035 name: 1.21 20th trifoliplate leaf unfolded PO:0007082 namespace: soybean_whole_plant_growth_stage def: "Growth from the unfolding of the 20th trifoliolate leaf until the unfolding of the 21st trifoliolate leaf on the main stem. Corresponds to Stage V20." [SoyWGR:005] comment: Growth from the unfolding of the 20th trifoliolate leaf until the unfolding of the 21st trifoliolate leaf on the main stem. Corresponds to Stage V20. synonym: "PO:0007082 20 or more leaves unfolded" RELATED [PO:0007082] synonym: "Stage V20" EXACT [] xref: PO:PO\:0007082 "LP.20 twenty or more leaves whorls visible stage" is_a: SOY:0000002 ! 1 Leaf Production [Term] id: SOY:0000036 name: 1.22 21st Trifoliolate Leaf Unfolded PO:0007082 namespace: soybean_whole_plant_growth_stage def: "Growth from the unfolding of the 21st trifoliolate leaf until the unfolding of the 22nd trifoliolate leaf on the main stem. Corresponds to Stage V21." [SoyWGR:005] comment: Growth from the unfolding of the 21st trifoliolate leaf until the unfolding of the 22nd trifoliolate leaf on the main stem. Corresponds to Stage V21. synonym: "PO:0007082 20 or more leaves unfolded" RELATED [PO:0007082] synonym: "Stage V21" EXACT [] xref: PO:PO\:0007082 "LP.20 twenty or more leaves whorls visible stage" is_a: SOY:0000002 ! 1 Leaf Production [Term] id: SOY:0000037 name: 1.23 22nd Trifoliolate Leaf Unfolded PO:0007082 namespace: soybean_whole_plant_growth_stage def: "Growth from the unfolding of the 22nd trifoliolate leaf until the unfolding of the 23rd trifoliolate leaf on the main stem. Corresponds to Stage V22." [SoyWGR:005] comment: Growth from the unfolding of the 22nd trifoliolate leaf until the unfolding of the 23rd trifoliolate leaf on the main stem. Corresponds to Stage V22. synonym: "PO:0007082 20 or more leaves unfolded" RELATED [PO:0007082] synonym: "Stage V22" EXACT [] xref: PO:PO\:0007082 "LP.20 twenty or more leaves whorls visible stage" is_a: SOY:0000002 ! 1 Leaf Production [Term] id: SOY:0000038 name: 1.24 23rd Trifoliolate Leaf Unfolded PO:0007082 namespace: soybean_whole_plant_growth_stage def: "Growth from the unfolding of the 23rd trifoliolate leaf until the unfolding of the 24th trifoliolate leaf on the main stem. Corresponds to Stage V23." [SoyWGR:005] comment: Growth from the unfolding of the 23rd trifoliolate leaf until the unfolding of the 24th trifoliolate leaf on the main stem. Corresponds to Stage V23. synonym: "PO:0007082 20 or more leaves unfolded" RELATED [PO:0007082] synonym: "Stage V23" EXACT [] xref: PO:PO\:0007082 "LP.20 twenty or more leaves whorls visible stage" is_a: SOY:0000002 ! 1 Leaf Production [Term] id: SOY:0000039 name: 1.26 25 or more Trifoliolate Leaves Unfolded PO:0007082 namespace: soybean_whole_plant_growth_stage def: "Growth from the unfolding of the 25th trifoliolate leaf on the main stem until the unfolding of the 26th or higher trifoliolate leaves on the main stem. Corresponds to Stage V25." [SoyWGR:005] comment: Growth from the unfolding of the 25th trifoliolate leaf on the main stem until the unfolding of the 26th or higher trifoliolate leaves on the main stem. Corresponds to Stage V25 or higher. synonym: "PO:0007082 20 or more leaves unfolded" RELATED [PO:0007082] synonym: "Stage V25" EXACT [] xref: PO:PO\:0007082 "LP.20 twenty or more leaves whorls visible stage" is_a: SOY:0000002 ! 1 Leaf Production [Term] id: SOY:0000040 name: 2.01 Main shoot and Axillary Shoot Visible at one node namespace: soybean_whole_plant_growth_stage def: "Axillary shoot visible from one node on main stem." [SoyWGR:001] comment: Axillary shoot visible from one node on main stem. synonym: "BCCH:21 201 First side shoot visible" EXACT [SoyWGR:003] synonym: "PO:0007087 Main shoot and axillary shoot(s) at one node visible" EXACT [PO:0007087] xref: PO:PO\:0007087 "2.01 main shoot and axillary shoots visible at one node stage" is_a: SOY:0000003 ! 2 Axillary Shoot Formation [Term] id: SOY:0000041 name: 2.02 Main Shoot and Axillary Shoots Visible at 2 nodes namespace: soybean_whole_plant_growth_stage def: "Axillary shoots visible from two nodes on the main stem." [SoyWGR:001] comment: Axillary shoots visible from two nodes on the main stem. synonym: "BCCH:22 202 2nd side shoot of first order visible" EXACT [SoyWGR:003] synonym: "PO:0007071 Main shoot and axillary shoots at two nodes visible" RELATED [PO:0007071] xref: PO:PO\:0007071 "2.02 main shoot and axillary shoots visible at two nodes stage" is_a: SOY:0000003 ! 2 Axillary Shoot Formation [Term] id: SOY:0000042 name: 2.03 Main Shoot and Axillary Shoots Visible at 3 nodes namespace: soybean_whole_plant_growth_stage def: "Axillary shoots visible from three nodes on the main stem." [SoyWGR:001] comment: Axillary shoots visible from three nodes on the main stem. synonym: "BCCH:23 203 3rd side shoot of first order visible" EXACT [SoyWGR:003] synonym: "PO:0007080 Main shoot and three axillary shoots visible" RELATED [PO:0007080] xref: PO:PO\:0007080 "2.03 main shoot and axillary shoots visible at three nodes stage" is_a: SOY:0000003 ! 2 Axillary Shoot Formation [Term] id: SOY:0000043 name: 2.04 Main Shoot and Axillary Shoots Visible at 4 nodes namespace: soybean_whole_plant_growth_stage def: "Axillary shoots visible from four nodes on the main stem." [SoyWGR:001] comment: Axillary shoots visible from four nodes on the main stem. synonym: "BCCH:24 204 4th side shoot of first order visible" EXACT [SoyWGR:003] synonym: "PO:0007088 Main shoot and four axillary shoots visible" EXACT [PO:0007088] xref: PO:PO\:0007088 "2.04 main shoot and axillary shoots visible at four nodes stage" is_a: SOY:0000003 ! 2 Axillary Shoot Formation [Term] id: SOY:0000044 name: 2.05 Main Shoot and Axillary Shoots Visible at 5 nodes namespace: soybean_whole_plant_growth_stage def: "Axillary shoots visible on five nodes on the main stem." [SoyWGR:001] comment: Axillary shoots visible on five nodes on the main stem. synonym: "BCCH:25 205 5th side shoot of first order visible" RELATED [SoyWGR:003] synonym: "PO:0007093 Main shoot and five axillary shoots visible" EXACT [PO:0007093] xref: PO:PO\:0007093 "2.05 main shoot and axillary shoots visible at five nodes stage" is_a: SOY:0000003 ! 2 Axillary Shoot Formation [Term] id: SOY:0000045 name: 2.06 Main Shoot and Axillary Shoots Visible at 6 nodes namespace: soybean_whole_plant_growth_stage def: "Axillary shoots visible on six nodes on the main stem." [SoyWGR:001] comment: Axillary shoots visible on six nodes on the main stem. synonym: "BCCH:26 206 6th side shoot of first order visible" EXACT [SoyWGR:003] synonym: "PO:0007118 Main shoot and six axillary shoots visible" EXACT [PO:0007118] xref: PO:PO\:0007118 "2.06 main shoot and axillary shoots visible at six nodes stage" is_a: SOY:0000003 ! 2 Axillary Shoot Formation [Term] id: SOY:0000046 name: 2.07 Main Shoot and Axillary Shoots Visible at 7 nodes namespace: soybean_whole_plant_growth_stage def: "Axillary shoots visible on seven nodes on the main stem." [SoyWGR:001] comment: Axillary shoots visible on seven nodes on the main stem. synonym: "BCCH:27 207 7th side shoot of first order visible" EXACT [SoyWGR:003] synonym: "PO:0007122 Main shoot and seven axillary shoots visible" EXACT [PO:0007122] xref: PO:PO\:0007122 "main shoot and axillary shoots visible at seven nodes stage" is_a: SOY:0000003 ! 2 Axillary Shoot Formation [Term] id: SOY:0000047 name: 2.08 Main Shoot and Axillary Shoots Visible at 8 nodes namespace: soybean_whole_plant_growth_stage def: "Axillary shoots visible on eight nodes on the main stem." [SoyWGR:001] comment: Axillary shoots visible on eight nodes on the main stem. synonym: "BCCH:28 208 8th side shoot of first order visible" EXACT [SoyWGR:003] synonym: "PO:0007077 Main shoot and eight axillary shoots visible" EXACT [PO:0007077] xref: PO:PO\:0007077 "2.08 main shoot and axillary shoots visible at eight nodes stage" is_a: SOY:0000003 ! 2 Axillary Shoot Formation [Term] id: SOY:0000048 name: 2.09 Main Shoot and Axillary Shoots Visible at 9 or more nodes namespace: soybean_whole_plant_growth_stage def: "Axillary shoots visible on nine or more nodes on the main stem." [SoyWGR:001] comment: Axillary shoots visible on nine or more nodes on the main stem. synonym: "BCCH:29 209 Nine or more side shoots of the first order" EXACT [SoyWGR:003] synonym: "PO:0007110 Main shoot and nine or more axillary shoots visible" RELATED [PO:0007110] xref: PO:PO\:0007110 "2.09 main shoot and axillary shoots visible at nine or more nodes stage" is_a: SOY:0000003 ! 2 Axillary Shoot Formation [Term] id: SOY:0000049 name: 3.00 Stem Elongation Begins namespace: soybean_whole_plant_growth_stage def: "Main stem elongation begins." [SoyWGR:001] synonym: "PO:0007079 SE.00 stem elongation begins" EXACT [PO:0007079] xref: PO:PO\:0007079 "SE.00 stem elongation begins stage" is_a: SOY:0000004 ! 3 Stem Elongation [Term] id: SOY:0000050 name: 3.01 One Node Visible namespace: soybean_whole_plant_growth_stage def: "One node/internode is visible on the main stem." [SoyWGR:001] comment: One node/internode is visible on the main stem. synonym: "PO:0007091 One node/internode visible" EXACT [PO:0007091] is_a: SOY:0000004 ! 3 Stem Elongation [Term] id: SOY:0000051 name: 3.02 2 Nodes/Internode Visible namespace: soybean_whole_plant_growth_stage def: "Two nodes and internodes visible on main stem." [SoyWGR:001] comment: Two nodes and internodes visible on main stem. synonym: "PO:0007117 two nodes/internode visible" EXACT [PO:0007117] is_a: SOY:0000004 ! 3 Stem Elongation [Term] id: SOY:0000052 name: 3.03 3 Nodes/Internodes Visible namespace: soybean_whole_plant_growth_stage def: "Three nodes and associated internodes visible on main stem." [SoyWGR:001] comment: Three nodes and associated internodes visible on main stem. synonym: "PO:0007096 Three Nodes/Internodes Visible" EXACT [PO:0007096] is_a: SOY:0000004 ! 3 Stem Elongation [Term] id: SOY:0000053 name: 3.04 4 Nodes/Internodes Visible namespace: soybean_whole_plant_growth_stage def: "Four nodes and associated internodes visible on main stem." [SoyWGR:001] comment: Four nodes and associated internodes visible on main stem. synonym: "PO:0007092 Four Nodes/Internodes Visible" EXACT [PO:0007092] is_a: SOY:0000004 ! 3 Stem Elongation [Term] id: SOY:0000054 name: 3.05 5 Nodes/Internodes Visible namespace: soybean_whole_plant_growth_stage def: "Five nodes and associated internodes visible on main stem." [SoyWGR:001] comment: Five nodes and associated internodes visible on main stem. synonym: "PO:0007086 Fifth node/internode visible" EXACT [PO:0007086] is_a: SOY:0000004 ! 3 Stem Elongation [Term] id: SOY:0000055 name: 3.06 6 Nodes/Internodes Visible namespace: soybean_whole_plant_growth_stage def: "Six nodes and associated internodes visible on main stem." [SoyWGR:001] comment: Six nodes and associated internodes visible on main stem. synonym: "PO:0007062 Sixth node/internode visible" EXACT [PO:0007062] is_a: SOY:0000004 ! 3 Stem Elongation [Term] id: SOY:0000056 name: 3.07 7 Nodes/Internodes Visible namespace: soybean_whole_plant_growth_stage def: "Seven nodes and associated internodes visible on main stem." [SoyWGR:001] comment: Seven nodes and associated internodes visible on main stem. synonym: "PO:0007108 Seventh node/internode visible" EXACT [PO:0007108] is_a: SOY:0000004 ! 3 Stem Elongation [Term] id: SOY:0000057 name: 3.08 8 Nodes/Internodes Visible namespace: soybean_whole_plant_growth_stage def: "Eight nodes and associated internodes visible on main stem." [SoyWGR:001] comment: Eight nodes and associated internodes visible on main stem. synonym: "PO:0007070 eight node/internode visible" EXACT [PO:0007070] is_a: SOY:0000004 ! 3 Stem Elongation [Term] id: SOY:0000058 name: 3.09 9 Nodes/Internodes Visible namespace: soybean_whole_plant_growth_stage def: "Nine nodes and associated internodes visible on main stem." [SoyWGR:001] comment: Nine nodes and associated internodes visible on main stem. synonym: "PO:0007066 Ninth node/internode visible" EXACT [PO:0007066] is_a: SOY:0000004 ! 3 Stem Elongation [Term] id: SOY:0000059 name: 3.10 10 Nodes/Internodes Visible namespace: soybean_whole_plant_growth_stage def: "Ten nodes and associated internodes visible on main stem." [SoyWGR:001] comment: Ten nodes and associated internodes visible on main stem. synonym: "PO:0007084 Ten nodes/internode visible" EXACT [PO:0007084] is_a: SOY:0000004 ! 3 Stem Elongation [Term] id: SOY:0000060 name: 3.11 11 Nodes/Internodes Visible namespace: soybean_whole_plant_growth_stage def: "Eleven nodes and associated internodes visible on main stem." [SoyWGR:001] comment: Eleven nodes and associated internodes visible on main stem. synonym: "PO:0007114 Eleventh node/internode visible" EXACT [PO:0007114] is_a: SOY:0000004 ! 3 Stem Elongation [Term] id: SOY:0000061 name: 3.12 12 Nodes/Internodes Visible namespace: soybean_whole_plant_growth_stage def: "Twelve nodes and associated internodes visible on main stem." [SoyWGR:001] comment: Twelve nodes and associated internodes visible on main stem. synonym: "PO:0007111 Twelve Nodes/Internodes Visible" EXACT [PO:0007111] is_a: SOY:0000004 ! 3 Stem Elongation [Term] id: SOY:0000062 name: 3.13 13 Nodes/Internodes Visible namespace: soybean_whole_plant_growth_stage def: "Thirteen nodes and associated internodes visible on main stem." [SoyWGR:001] comment: Thirteen nodes and associated internodes visible on main stem. synonym: "PO:0007090 Thirteenth node/internode visible" EXACT [PO:0007090] is_a: SOY:0000004 ! 3 Stem Elongation [Term] id: SOY:0000063 name: 3.14 14 Nodes/Internodes Visible namespace: soybean_whole_plant_growth_stage def: "Fourteen nodes and associated internodes visible on main stem." [SoyWGR:001] comment: Fourteen nodes and associated internodes visible on main stem. synonym: "PO:0007097 Fourteenth node/internode visible" EXACT [PO:0007097] is_a: SOY:0000004 ! 3 Stem Elongation [Term] id: SOY:0000064 name: 3.15 15 Nodes/Internodes Visible namespace: soybean_whole_plant_growth_stage def: "Fifteen nodes and associated internodes visible on main stem." [SoyWGR:001] comment: Fifteen nodes and associated internodes visible on main stem. synonym: "PO:0007074 Fifteenth node/internode visible" EXACT [PO:0007074] is_a: SOY:0000004 ! 3 Stem Elongation [Term] id: SOY:0000065 name: 3.16 16 or More Nodes/Internodes Visible namespace: soybean_whole_plant_growth_stage def: "Sixteen or more nodes and associated internodes visible on main stem." [SoyWGR:001] comment: Sixteen or more nodes and associated internodes visible on main stem. synonym: "PO:0007100 Sixteen or more nodes/internode visible" EXACT [PO:0007100] is_a: SOY:0000004 ! 3 Stem Elongation [Term] id: SOY:0000066 name: 3.99 Maximum Stem Length Reached namespace: soybean_whole_plant_growth_stage def: "The maximum length of the main stem is reached." [SoyWGR:001] comment: The maximum length of the main stem is reached. synonym: "PO:0007109 Maximum stem length reached" EXACT [PO:0007109] xref: PO:PO\:0007109 "SE.99 maximum stem length reached stage" is_a: SOY:0000004 ! 3 Stem Elongation [Term] id: SOY:0000067 name: 4.01 Inflorescence Just Visible. namespace: soybean_whole_plant_growth_stage def: "Inflorescence just visible." [SoyWGR:004] comment: Inflorescence just visible. synonym: "PO:0007006 Inflorescence just visible" EXACT [PO:0007006] xref: PO:PO\:0007006 "IL.00 inflorescence just visible stage" is_a: SOY:0000005 ! 4 Inflorescence Formation [Term] id: SOY:0000068 name: 4.02 1/4 of Inflorescence Length Reached namespace: soybean_whole_plant_growth_stage def: "The inflorescence has reached 1/4th of its full length." [SoyWGR:001] comment: The inflorescence has reached 1/4th of its full length. synonym: "PO:0007046 1/4 Inflorescence Length Reached" EXACT [PO:0007046] xref: PO:PO\:0007046 "IL.01 1/4 inforescence length reached stage" is_a: SOY:0000005 ! 4 Inflorescence Formation [Term] id: SOY:0000069 name: 4.03 1/2 of Inflorescence Length Reached namespace: soybean_whole_plant_growth_stage def: "The inflorescence has reached 1/2 of its full length." [SoyWGR:001] comment: The inflorescence has reached 1/2 of its full length. synonym: "PO:0007005 1/2 Inflorescence Length Reached" EXACT [PO:0007005] xref: PO:PO\:0007005 "IL.02 1/2 of inflorescence length reached stage" is_a: SOY:0000005 ! 4 Inflorescence Formation [Term] id: SOY:0000070 name: 4.04 Full Inflorescence Length Reached namespace: soybean_whole_plant_growth_stage def: "The inflorescence has reached its full length." [SoyWGR:001, SoyWGR:004] comment: The inflorescence has reached its full length. synonym: "PO:0007003 full Inflorescence Length Reached" EXACT [PO:0007003] xref: PO:PO\:0007003 "IL.03 full inforescence length reached stage" is_a: SOY:0000005 ! 4 Inflorescence Formation [Term] id: SOY:0000071 name: Leaf Number namespace: soybean_trait def: "The number of leaves (petioles) originating from a node on a stem." [SOY:001] synonym: "leaflet number" EXACT [] xref: GO:GO\:0010338 "leaf formation" xref: PO:PO\:0025034 "leaf" xref: TO:TO\:0000241 "leaf number" is_a: SOY:0001983 ! Leaflet growth and development traits created_by: rnelson creation_date: 2010-09-28T08:20:47Z [Term] id: SOY:0000072 name: 6.00 1st Flowers on Main Stem Open PO:0007026, BBCH 60 600 namespace: soybean_whole_plant_growth_stage def: "First flowers on main stem open. Corresponds to soybean developmental stage R1." [Soybean:Curator, SoyWGR:002, SoyWGR:005] comment: First flowers on main stem open. Corresponds to soybean developmental stage R1. synonym: "BCCH:60 600 First flowers on main shoot opened" RELATED [SoyWGR:003] synonym: "PO:0007026 First flower(s) open. These first flowers are not necessarily the oldest flowers on the inflorescence." NARROW [PO:0007026] synonym: "Stage R1 Open flower at any node on the main stem." EXACT [Soybean:soy0001] xref: PO:PO\:0007026 "FL.00 first flower(s) open stage" is_a: SOY:0000006 ! 6 Flowering xref_unknown: Soybean:001 "Stages of Soybean Development. Fehr, W and Caviness, C 1977 Iowa State University Extension Publication SR80" [Term] id: SOY:0000073 name: 6.02 1/4 of Flowers Open namespace: soybean_whole_plant_growth_stage def: "One fourth of flowers on the main stem are open." [] comment: One fourth of flowers on the main stem are open. synonym: "BCCH:62 602 About 20% of flowers on the main stem open" BROAD [SoyWGR:003] xref: PO:PO\:0007034 "FL.01 1/4 flowers open stage" is_a: SOY:0000006 ! 6 Flowering [Term] id: SOY:0000074 name: 6.07 3/4 of Flowers Open namespace: soybean_whole_plant_growth_stage def: "Three quarters of the flowers on the main stem are open." [SoyWGR:001] comment: Three quarters of the flowers on the main stem are open. xref: PO:PO\:0007052 "FL.03 3/4 of flowers open stage" is_a: SOY:0000006 ! 6 Flowering [Term] id: SOY:0000075 name: 6.08 Full Flowering Approx. Equiv. PO:0007052 namespace: soybean_whole_plant_growth_stage def: "An open flower at one of the two uppermost nodes on the main stem with a fully developed trifoliolate leaf." [SoyWGR:001, SoyWGR:002, SoyWGR:005] comment: Open flowers at one of the two uppermost nodes on the main stem with a fully developed trifoliolate leaf node, corresponds to R2 stage. synonym: "PO:0007052 FL.03 3/4 of flowers open" BROAD [PO:0007052] synonym: "Stage R2" EXACT [Soybean:001] is_a: SOY:0000006 ! 6 Flowering [Term] id: SOY:0000076 name: 6.09 End of Flowering namespace: soybean_whole_plant_growth_stage def: "First pods visible (approx. 5mm)." [SoyWGR:001, SoyWGR:002, SoyWGR:003] comment: First pods visible (approx. 5mm). Corresponds to stage R3 (Begining Pod) when the first pods are visible on the 4 uppermost nodes on the main stem with a fully developed trifoliolate leaf. synonym: "BCCH:69 609 End of flowering: first pods visible (approx. 5 mm)" RELATED [SoyWGR:003] synonym: "PO:0007024 End of flowering" RELATED [PO:0007024] xref: PO:PO\:0007024 "FL.04 end of flowering stage" is_a: SOY:0000006 ! 6 Flowering [Term] id: SOY:0000077 name: 7 Pod Formation namespace: soybean_whole_plant_growth_stage def: "Development of the soybean pod." [SoyWGR:001] synonym: "PO:0007042" RELATED [] xref: PO:PO\:0025501 "fruit formation stage" is_a: SOY:0000007 ! 7-8 Fruit Formation and Maturation [Term] id: SOY:0000078 name: 8 Bean Development namespace: soybean_whole_plant_growth_stage def: "Development of the seeds in a bean pod." [SoyWGR:001] xref: PO:PO\:0004506 "developing seed stage" is_a: SOY:0000007 ! 7-8 Fruit Formation and Maturation [Term] id: SOY:0000079 name: 7.01 Pod 10% of Final Length Approx. Equiv. R3, PO:0007032 namespace: soybean_whole_plant_growth_stage def: "A pod has reached 10% of its final length (3.0 - 4.0 mm)." [SoyWGR:001, SoyWGR:004] comment: A pod has reached 10% of its final length (3.0 - 4.0 mm). Approximately equivalent to R3 when the pod in question is on one of the four upper most nodes on the main stem. synonym: "PO:0007032 Fruit size 10%" BROAD [PO:0007032] synonym: "Stage R3" BROAD [SoyWGR:005] is_a: SOY:0000077 ! 7 Pod Formation [Term] id: SOY:0000080 name: 7.02 Pod 30% of Final Length namespace: soybean_whole_plant_growth_stage def: "A pod has reached 30% of its final length (9 - 12 mm)." [SoyWGR:001, SoyWGR:004] comment: A pod has reached 30% of its final length (9 - 12 mm). synonym: "PO:0007009 Fruit size 30%" NARROW [PO:0007009] is_a: SOY:0000077 ! 7 Pod Formation [Term] id: SOY:0000081 name: 7.03 Pod 50% of Final Length PO:0007029, approx. equiv. R4 namespace: soybean_whole_plant_growth_stage def: "A pod has reached 50% of its final length (15 - 20 mm)." [SoyWGR:001, SoyWGR:002, SoyWGR:004, SoyWGR:005] comment: A pod has reached 50% of its final length (15 - 20 mm). Corresponds to stage R4 (full pod stage) when a pod on one of 4 upper most nodes on main stem with fully developed trifoliate leaf node reaches 20 mm. synonym: "PO:0007029 Fruit size 50%" EXACT [PO:0007029] synonym: "Stage R4" BROAD [] is_a: SOY:0000077 ! 7 Pod Formation [Term] id: SOY:0000082 name: 7.07 Pod 70% of Final Length namespace: soybean_whole_plant_growth_stage def: "A pod has reached 70% of its final size (21 - 28 mm)." [SoyWGR:001, SoyWGR:004] comment: A pod has reached 70% of its final size (21 - 28 mm). synonym: "PO:0007007 Fruit size 70%" RELATED [] is_a: SOY:0000077 ! 7 Pod Formation [Term] id: SOY:0000083 name: 7.08 Pod 75% of Final Length namespace: soybean_whole_plant_growth_stage def: "A pod has reached 75% of its final size (23 - 30 mm)." [SoyWGR:001] comment: A pod has reached 75% of its final size (23 - 30 mm). is_a: SOY:0000077 ! 7 Pod Formation [Term] id: SOY:0000084 name: 7.09 Pod Full Size namespace: soybean_whole_plant_growth_stage def: "A pod has reached its full size (30 - 40 mm)." [SoyWGR:001, SoyWGR:002, SoyWGR:004, SoyWGR:005] comment: A pod has reached its full size (15 - 20mm). Corresponds to Full Pod stage (R4) when there is a full size pod at one of the four uppermost nodes on the main stem with a fully developed trifoliolate leaf. synonym: "PO:0007027 Final Fruit size" BROAD [PO:0007027] is_a: SOY:0000077 ! 7 Pod Formation [Term] id: SOY:0000085 name: 8.01 Beginning of Bean Ripening PO:0007001 approx. equiv. R5 namespace: soybean_whole_plant_growth_stage def: "Appearance of 1st seed in the pod." [SoyWGR:001, SoyWGR:002, SoyWGR:005] comment: Appearance of 1st seed in the pod. Corresponds stage R5 (Beginning seed) when a seed is 3mm long in a pod at one of the 4 uppermost nodes on the main stem with a fully developed trifoliolate leaf. synonym: "PO:0007001 FR.01 early stage of fruit ripening" RELATED [PO:0007001] synonym: "Stage R5" BROAD [SoyWGR:005] is_a: SOY:0000078 ! 8 Bean Development xref_unknown: SoyWGR:001 "Stages of Soybean Development Fehr, W and Caviness C. 1977 Iowa State University Extension publication SR80" [Term] id: SOY:0000086 name: 8.03 Early Ripening namespace: soybean_whole_plant_growth_stage def: "All seeds set in a pod." [SoyWGR:001] comment: All seeds set in the pod. Corresponds to stage R5 when a pod on one of 4 upper most nodes on main stem with fully developed trifoliate leaf node has a seed 3 mm (1/8 inch). synonym: "PO:0007001 FR.01 early stage of fruit ripening" BROAD [PO:0007001] is_a: SOY:0000078 ! 8 Bean Development [Term] id: SOY:0000087 name: 8.05 Mid Ripening Approx. Equiv. PO:0007031, R6 namespace: soybean_whole_plant_growth_stage def: "One seed fills its pod cavity." [SoyWGR:001, SoyWGR:002, SoyWGR:005] comment: One seed has filled the pod cavity. Corresponds to stage R6 (Full seed) when a pod on one of 4 upper most nodes on main stem with fully developed trifoliolate leaf node reaches this stage. synonym: "PO:0007031 mid stage of fruit ripening" RELATED [PO:0007031] synonym: "Stage R6" BROAD [SoyWGR:005] is_a: SOY:0000078 ! 8 Bean Development [Term] id: SOY:0000088 name: 8.07 Late Ripening Approx. Equiv. PO:0007050, R7, BBCH 79 709 namespace: soybean_whole_plant_growth_stage def: "All seeds have filled their pod cavity and the pod has reached its mature pod color." [SoyWGR:001, SoyWGR:002, SoyWGR:005] comment: All seeds in a pod have filled the pod cavity and the pod has reached its mature pod color. Corresponds to stage R7 (beginning maturity) when a pod on main stem reaches this stage. synonym: "BBCH 79 709" RELATED [SoyWGR:003] synonym: "PO:0007050 Late Stage of fruit ripening" RELATED [PO:0007050] synonym: "Stage R7" BROAD [SoyWGR:003] is_a: SOY:0000078 ! 8 Bean Development [Term] id: SOY:0000089 name: 8.09 Final Ripening Approx. Equiv. PO:0007038, R8, BBCH 89 909 namespace: soybean_whole_plant_growth_stage def: "All seeds in a pod have reached their final color." [SoyWGR:001, SoyWGR:004] comment: All pod seeds have reached their final harvest color. Equivalent to Stage R8 when 95% of the pods on a plant have reached their final color along with their seeds. synonym: "BBCH 89 909" BROAD [SoyWGR:003] synonym: "PO:0007038 Fruit ripening complete" RELATED [PO:0007038] synonym: "Stage R8" BROAD [SoyWGR:005] is_a: SOY:0000078 ! 8 Bean Development [Term] id: SOY:0000090 name: 01 Beginning of Seed Imbibition namespace: soybean_whole_plant_growth_stage def: "Seed begins to swell." [SoyWGR:001] comment: Seed begins to swell. This begins VE stage development. synonym: "BBCH stage 01 001" RELATED [] synonym: "PO:0007022 imbibition" RELATED [PO:0007022] synonym: "VE stage" BROAD [] is_a: SOY:0000001 ! 0 Germination [Term] id: SOY:0000091 name: 03 Seed Imbibition Complete namespace: soybean_whole_plant_growth_stage def: "Seed has swelled to its maximum size." [SOY:001] comment: Seed has swelled to its maximum size. Part of VE stage development. Synonymous with PO:0007022 Seed imbibition. synonym: "03 003 BBCH growth stage" RELATED [] xref: PO:PO\:0007022 "imbibition" is_a: SOY:0000001 ! 0 Germination xref_unknown: SoyWGR:003 "BBCH Soybean Munger et al. 1997. Phenological Growth Stages of the Soybean Plant (Glycine max (L.) MERR.) Codification and Description according to the General BBCH Scale. Journal of Agronomy and Crop Science 179:209 - 217" [Term] id: SOY:0000092 name: 0.07.02 Hypocotyl Emerges Above Soil namespace: soybean_whole_plant_growth_stage def: "The hypocotyl arch is visible above the surface of the soil." [SoyWGR:001] comment: The hypocotyl arch is visible above the surface of the soil. Part of VE stage development. synonym: "BCCH:08 008 Hypocotyl reaches soil surface; hypocotyl arch visible" RELATED [] synonym: "PO:0007043 hypocotyl emergence" RELATED [] is_a: SOY:0000012 ! 07 Shoot Emergence [Term] id: SOY:0000093 name: 0.07.03 Cotyledons Emerge namespace: soybean_whole_plant_growth_stage def: "Cotyledons are pulled by the hypocotyl just to the surface of the soil." [SoyWGR:001] comment: Cotyledons are pulled by the hypocotyl just to the surface of the soil. Part of VE stage development. synonym: "PO:0007049 Emergence of cotyledons above ground." EXACT [PO:0007049] is_a: SOY:0000012 ! 07 Shoot Emergence xref_unknown: SoyWGR:003 "BBCH Soybean Munger et al. 1997. Phenological Growth Stages of the Soybean Plant (Glycine max (L.) MERR.) Codification and Description according to the General BBCH Scale. Journal of Agronomy and Crop Science 179:209 - 217" [Term] id: SOY:0000094 name: 6.05 1/2 of Flowers on Main Stem Open PO:0007053, BCCH 65 605 namespace: soybean_whole_plant_growth_stage def: "Half of flowers on the main stem are open." [SoyWGR:001, SoyWGR:004] comment: Half of flowers on the main stem are open. synonym: "BCCH:65 605 Full Flowering: about 50% of flowers open on main stem" BROAD [SoyWGR:003] synonym: "PO:0007053 Half of flowers open" BROAD [PO:0007053] xref: PO:PO\:0007053 "FL.02 1/2 flowers open stage" is_a: SOY:0000006 ! 6 Flowering [Term] id: SOY:0000095 name: 7.10 Pod Mature namespace: soybean_whole_plant_growth_stage def: "Pod has reached its final color (tan to black)." [SoyWGR:001] comment: Broadly synonymous with soybean growth stage R8 when 95% of all pods on a plant have attained their final mature color. synonym: "R8" RELATED [SoyWGR:005] is_a: SOY:0000077 ! 7 Pod Formation created_by: rnelson creation_date: 2010-02-25T08:39:00Z [Term] id: SOY:0000096 name: 1.25 24th Trifoliolate Leaf Unfolded PO:0007082 namespace: soybean_whole_plant_growth_stage def: "Growth from the unfolding of the 25th trifoliolate leaf on the main stem until the unfolding of the 26th or higher trifoliolate leaves on the main stem. Corresponds to Stage V25." [SoyWGR:005] synonym: "PO:0007082 20 or more leaves unfolded" RELATED [PO:0007082] synonym: "Stag V24" EXACT [] xref: PO:PO\:0007082 "LP.20 twenty or more leaves whorls visible stage" is_a: SOY:0000002 ! 1 Leaf Production created_by: rnelson creation_date: 2010-02-26T11:13:53Z [Term] id: SOY:0000097 name: Soybean Whole Plant Growth Stages namespace: soybean_whole_plant_growth_stage def: "These terms describes the growth of a field of soybeans not necessarily a single plant." [SoyWGR:001] comment: This ontology was created to unite the published soybean growth and development stages in Iowa State University Extension publication PM1945 with the BBCH scale and the Plant Ontology Consortium's Whole Plant Growth Stages ontologies. xref: PO:PO\:0007033 "whole plant development stage" is_a: SOY:0000000 ! Soybean Growth and Trait Ontology V10 revision 1.4 created_by: rnelson creation_date: 2010-05-14T01:44:19Z [Term] id: SOY:0000098 name: Soybean Structure Terms namespace: soybean_structure def: "This ontology describes the development of a single soybean plant or plant part." [SoyWGR:001] is_a: SOY:0000000 ! Soybean Growth and Trait Ontology V10 revision 1.4 created_by: rnelson creation_date: 2010-05-14T01:47:46Z [Term] id: SOY:0000099 name: Soybean Trait Terms namespace: soybean_trait def: "These terms describes soybean plant growth, yield, and biochemical traits and the reaction of a soybean plant or plant part to biotic and abiotic stresses." [SoyTO:001, SoyTO:rtn] is_a: SOY:0000000 ! Soybean Growth and Trait Ontology V10 revision 1.4 created_by: rnelson creation_date: 2010-05-14T01:49:16Z [Term] id: SOY:0000100 name: m1 namespace: soybean_structure def: "Metamer (internode and node) associated with the unifoliate leaf on the main stem." [SOY:001] synonym: "PO:0007091 SE.01 one node or internode visible" EXACT [] is_a: SOY:0000243 ! Main Stem Metamers [Term] id: SOY:0000101 name: m2 namespace: soybean_structure def: "Metamer (internode and node) associated with the first trifoliolate leaf on the main stem." [SoyGro:001] synonym: "PO:0007117 SE.02 two nodes or internodes visible" EXACT [] is_a: SOY:0000243 ! Main Stem Metamers [Term] id: SOY:0000102 name: m3 namespace: soybean_structure def: "Metamer (internode and node) associated with the 2nd trifoliolate leaf on the main stem." [SoyGro:001] synonym: "PO:0007096 SE.03 three nodes or internodes visible" RELATED [] is_a: SOY:0000243 ! Main Stem Metamers [Term] id: SOY:0000103 name: m4 namespace: soybean_structure def: "Metamer (internode and node) associated with the 3rd trifoliolate leaf on the main stem." [SoyGro:001] synonym: "BBCH growth stage 34" EXACT [] synonym: "PO:0007092 SE.04 four nodes or internodes visible" EXACT [] is_a: SOY:0000243 ! Main Stem Metamers [Term] id: SOY:0000104 name: m5 namespace: soybean_structure def: "Metamer (internode and node) associated with the 4th trifoliolate leaf on the main stem." [SoyGro:001] synonym: "BBCH growth stage 35" EXACT [] synonym: "PO:0007086 SE.05 five nodes or internodes visible" EXACT [] is_a: SOY:0000243 ! Main Stem Metamers [Term] id: SOY:0000105 name: m6 namespace: soybean_structure def: "Metamer (internode and node) associated with the 5th trifoliolate leaf on the main stem." [SoyGro:001] synonym: "BBCH growth stage 36" EXACT [] synonym: "PO:0007062 SE.06 six nodes or internodes visible" EXACT [] is_a: SOY:0000243 ! Main Stem Metamers [Term] id: SOY:0000106 name: m7 namespace: soybean_structure def: "Metamer (internode and node) associated with the 6th trifoliolate leaf on the main stem." [SoyGro:001] synonym: "BBCH growth stage 37" EXACT [] synonym: "PO:0007108 SE.07 seven nodes or internodes visible" EXACT [] is_a: SOY:0000243 ! Main Stem Metamers [Term] id: SOY:0000107 name: m8 namespace: soybean_structure def: "Metamer (internode and node) associated with the 7th trifoliolate leaf on the main stem." [SoyGro:001] synonym: "BBCH growth stage 38" EXACT [] synonym: "PO:0007070 SE.08 eight nodes or internodes visible" EXACT [] is_a: SOY:0000243 ! Main Stem Metamers [Term] id: SOY:0000108 name: m9 namespace: soybean_structure def: "Metamer (internode and node) associated with the 8th trifoliolate leaf on the main stem." [SoyGro:001] synonym: "BBCH growth stage 39" EXACT [] synonym: "PO:0007066 SE.09 nine nodes or internodes visible" EXACT [] is_a: SOY:0000243 ! Main Stem Metamers [Term] id: SOY:0000109 name: m10 namespace: soybean_structure def: "Metamer (internode and node) associated with the 9th trifoliolate leaf on the main stem." [SoyGro:001] synonym: "PO:0007084 SE.10 ten nodes or internodes visible" EXACT [] xref: PO:0020141 "Stem node" is_a: SOY:0000243 ! Main Stem Metamers [Term] id: SOY:0000110 name: m11 namespace: soybean_structure def: "Metamer (internode and node) associated with the 10th trifoliolate leaf on the main stem." [SoyGro:001] synonym: "PO:0007114 SE.11 eleven nodes or internodes visible" EXACT [] is_a: SOY:0000243 ! Main Stem Metamers [Term] id: SOY:0000111 name: m12 namespace: soybean_structure def: "Metamer (internode and node) associated with the 11th trifoliolate leaf on the main stem." [SoyGro:001] synonym: "SE.12 twelve nodes or internodes visible" EXACT [] is_a: SOY:0000243 ! Main Stem Metamers [Term] id: SOY:0000112 name: m13 namespace: soybean_structure def: "Metamer (internode and node) associated with the 12th trifoliolate leaf on the main stem." [SoyGro:001] synonym: "PO:0007090 SE.13 thirteen nodes or internodes visible" EXACT [] is_a: SOY:0000243 ! Main Stem Metamers [Term] id: SOY:0000113 name: m14 namespace: soybean_structure def: "Metamer (internode and node) associated with the 13th trifoliolate leaf on the main stem." [SoyGro:001] synonym: "PO:0007097 SE.14 fourteen nodes or internodes visible" EXACT [] is_a: SOY:0000243 ! Main Stem Metamers [Term] id: SOY:0000114 name: m15 namespace: soybean_structure def: "Metamer (internode and node) associated with the 14th trifoliolate leaf on the main stem." [SoyGro:001] synonym: "PO:0007074 SE.15 fifteen nodes or internodes visible" EXACT [] is_a: SOY:0000243 ! Main Stem Metamers [Term] id: SOY:0000115 name: m16 namespace: soybean_structure def: "Metamer (internode and node) associated with the 15th trifoliolate leaf on the main stem." [SoyGro:001] synonym: "PO:0007100 SE.16 sixteen or more nodes or internodes visible" EXACT [] is_a: SOY:0000243 ! Main Stem Metamers [Term] id: SOY:0000116 name: m1-1 namespace: soybean_structure def: "The first metamer (internode and node) forming from an axillary shoot originating at metamer 1." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000117 name: m2-1 namespace: soybean_structure def: "The first metamer (internode and node) forming from an axillary shoot originating from m2 on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000118 name: m3-1 namespace: soybean_structure def: "The first metamer (internode and node) forming from an axillary shoot originating from the m3 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000119 name: m4-1 namespace: soybean_structure def: "The first metamer (internode and node) forming from an axillary shoot originating from the m4 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000120 name: m5-1 namespace: soybean_structure def: "The first metamer (internode and node) forming from an axillary shoot originating from the m5 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000121 name: m6-1 namespace: soybean_structure def: "The first metamer (internode and node) forming from an axillary shoot originating from the m6 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000122 name: m7-1 namespace: soybean_structure def: "The first metamer (internode and node) forming from an axillary shoot originating from the m7 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000123 name: m8-1 namespace: soybean_structure def: "The first metamer (internode and node) forming from an axillary shoot originating from the m8 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000124 name: m9-1 namespace: soybean_structure def: "The first metamer (internode and node) forming from an axillary shoot originating from the m9 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000125 name: m10-1 namespace: soybean_structure def: "The first metamer (internode and node) forming from an axillary shoot originating from the m10 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000126 name: m11-1 namespace: soybean_structure def: "The first metamer (internode and node) forming from an axillary shoot originating from the m11 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000127 name: m12-1 namespace: soybean_structure def: "The first metamer (internode and node) forming from an axillary shoot originating from the m12 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000128 name: m13-1 namespace: soybean_structure def: "The first metamer (internode and node) forming from an axillary shoot originating from the m13 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000129 name: m14-1 namespace: soybean_structure def: "The first metamer (internode and node) forming from an axillary shoot originating from the m14 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000130 name: m15-1 namespace: soybean_structure def: "The first metamer (internode and node) forming from an axillary shoot originating from the m15 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000131 name: m16-1 namespace: soybean_structure def: "The first metamer (internode and node) forming from an axillary shoot originating from the m16 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000132 name: m1-2 namespace: soybean_structure def: "The 2nd metamer (internode and node) forming from an axillary shoot originating from the m1 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000133 name: m2-2 namespace: soybean_structure def: "The 2nd metamer (internode and node) forming from an axillary shoot originating from the m2 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000134 name: m4-2 namespace: soybean_structure def: "The 2nd metamer (internode and node) forming from an axillary shoot originating from the m4 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000135 name: m5-2 namespace: soybean_structure def: "The 2nd metamer (internode and node) forming from an axillary shoot originating from the m5 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000136 name: m6-2 namespace: soybean_structure def: "The 2nd metamer (internode and node) forming from an axillary shoot originating from the m6 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000137 name: m7-2 namespace: soybean_structure def: "The 2nd metamer (internode and node) forming from an axillary shoot originating from the m7 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000138 name: m8-2 namespace: soybean_structure def: "The 2nd metamer (internode and node) forming from an axillary shoot originating from the m8 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000139 name: m10-2 namespace: soybean_structure def: "The 2nd metamer (internode and node) forming from an axillary shoot originating from the m10 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000140 name: m11-2 namespace: soybean_structure def: "The 2nd metamer (internode and node) forming from an axillary shoot originating from the m11 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000141 name: m12-2 namespace: soybean_structure def: "The 2nd metamer (internode and node) forming from an axillary shoot originating from the m12 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000142 name: m13-2 namespace: soybean_structure def: "The 2nd metamer (internode and node) forming from an axillary shoot originating from the m13 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000143 name: m14-2 namespace: soybean_structure def: "The 2nd metamer (internode and node) forming from an axillary shoot originating from the m14 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000144 name: m15-2 namespace: soybean_structure def: "The 2nd metamer (internode and node) forming from an axillary shoot originating from the m15 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000145 name: m16-2 namespace: soybean_structure def: "The 2nd metamer (internode and node) forming from an axillary shoot originating from the m16 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000146 name: m1-3 namespace: soybean_structure def: "The 3rd metamer (internode and node) forming from an axillary shoot originating from the m1 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000147 name: m2-3 namespace: soybean_structure def: "The 3rd metamer (internode and node) forming from an axillary shoot originating from the m2 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000148 name: m3-3 namespace: soybean_structure def: "The 3rd metamer (internode and node) forming from an axillary shoot originating from the m3 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000149 name: m7-3 namespace: soybean_structure def: "The 3rd metamer (internode and node) forming from an axillary shoot originating from the m7 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000150 name: m8-3 namespace: soybean_structure def: "The 3rd metamer (internode and node) forming from an axillary shoot originating from the m8 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000151 name: m9-3 namespace: soybean_structure def: "The 3rd metamer (internode and node) forming from an axillary shoot originating from the m9 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000152 name: m10-3 namespace: soybean_structure def: "The 3rd metamer (internode and node) forming from an axillary shoot originating from the m10 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000153 name: m11-3 namespace: soybean_structure def: "The 3rd metamer (internode and node) forming from an axillary shoot originating from the m11 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000154 name: m12-3 namespace: soybean_structure def: "The 3rd metamer (internode and node) forming from an axillary shoot originating from the m12 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000155 name: m13-3 namespace: soybean_structure def: "The 3rd metamer (internode and node) forming from an axillary shoot originating from the m13 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000156 name: m14-3 namespace: soybean_structure def: "The 3rd metamer (internode and node) forming from an axillary shoot originating from the m14 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000157 name: m15-3 namespace: soybean_structure def: "The 3rd metamer (internode and node) forming from an axillary shoot originating from the m15 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000158 name: m16-3 namespace: soybean_structure def: "The 3rd metamer (internode and node) forming from an axillary shoot originating from the m16 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000159 name: m1-4 namespace: soybean_structure def: "The 4th metamer (internode and node) forming from an axillary shoot originating from the m1 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000160 name: m2-4 namespace: soybean_structure def: "The 4th metamer (internode and node) forming from an axillary shoot originating from the m2 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000161 name: m3-4 namespace: soybean_structure def: "The 4th metamer (internode and node) forming from an axillary shoot originating from the m3 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000162 name: m4-4 namespace: soybean_structure def: "The 4th metamer (internode and node) forming from an axillary shoot originating from the m4 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000163 name: m5-4 namespace: soybean_structure def: "The 4th metamer (internode and node) forming from an axillary shoot originating from the m5 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000164 name: m6-4 namespace: soybean_structure def: "The 4th metamer (internode and node) forming from an axillary shoot originating from the m6 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000165 name: m7-4 namespace: soybean_structure def: "The 4th metamer (internode and node) forming from an axillary shoot originating from the m7 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000166 name: m8-4 namespace: soybean_structure def: "The 4th metamer (internode and node) forming from an axillary shoot originating from the m8 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000167 name: m9-4 namespace: soybean_structure def: "The 4th metamer (internode and node) forming from an axillary shoot originating from the m9 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000168 name: m10-4 namespace: soybean_structure def: "The 4th metamer (internode and node) forming from an axillary shoot originating from the m10 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000169 name: m11-4 namespace: soybean_structure def: "The 4th metamer (internode and node) forming from an axillary shoot originating from the m11 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000170 name: m12-4 namespace: soybean_structure def: "The 4th metamer (internode and node) forming from an axillary shoot originating from the m12 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000171 name: m13-4 namespace: soybean_structure def: "The 4th metamer (internode and node) forming from an axillary shoot originating from the m13 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000172 name: m14-4 namespace: soybean_structure def: "The 4th metamer (internode and node) forming from an axillary shoot originating from the m14 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000173 name: m15-4 namespace: soybean_structure def: "The 4th metamer (internode and node) forming from an axillary shoot originating from the m15 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000174 name: m16-4 namespace: soybean_structure def: "The 4th metamer (internode and node) forming from an axillary shoot originating from the m16 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000175 name: m1-F0 namespace: soybean_structure def: "An inflorescence originating from the axilla of the m1 metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" BROAD [] is_a: SOY:0000244 ! Main Stem Inflorescences [Term] id: SOY:0000176 name: m2-F0 namespace: soybean_structure def: "An inflorescence originating from the axilla of the m2 metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000244 ! Main Stem Inflorescences [Term] id: SOY:0000177 name: m3-F0 namespace: soybean_structure def: "An inflorescence originating from the axilla of the m3 metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000244 ! Main Stem Inflorescences [Term] id: SOY:0000178 name: m4-F0 namespace: soybean_structure def: "An inflorescence originating from the axilla of the m4 metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000244 ! Main Stem Inflorescences [Term] id: SOY:0000179 name: m5-F0 namespace: soybean_structure def: "An inflorescence originating from the axilla of the m5 metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000244 ! Main Stem Inflorescences [Term] id: SOY:0000180 name: m6-F0 namespace: soybean_structure def: "An inflorescence originating from the axilla of the m6 metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000244 ! Main Stem Inflorescences [Term] id: SOY:0000181 name: m7-F0 namespace: soybean_structure def: "An inflorescence originating from the axilla of the m7 metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000244 ! Main Stem Inflorescences [Term] id: SOY:0000182 name: m8-F0 namespace: soybean_structure def: "An inflorescence originating from the axilla of the m8 metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000244 ! Main Stem Inflorescences [Term] id: SOY:0000183 name: m9-F0 namespace: soybean_structure def: "An inflorescence originating from the axilla of the m9 metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000244 ! Main Stem Inflorescences [Term] id: SOY:0000184 name: m10-F0 namespace: soybean_structure def: "An inflorescence originating from the axilla of the m10 metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000244 ! Main Stem Inflorescences [Term] id: SOY:0000185 name: m11-F0 namespace: soybean_structure def: "An inflorescence originating from the axilla of the m11 metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000244 ! Main Stem Inflorescences [Term] id: SOY:0000186 name: m12-F0 namespace: soybean_structure def: "An inflorescence originating from the axilla of the m12 metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000244 ! Main Stem Inflorescences [Term] id: SOY:0000187 name: m13-F0 namespace: soybean_structure def: "An inflorescence originating from the axilla of the m13 metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000244 ! Main Stem Inflorescences [Term] id: SOY:0000188 name: m14-F0 namespace: soybean_structure def: "An inflorescence originating from the axilla of the m14 metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000244 ! Main Stem Inflorescences [Term] id: SOY:0000189 name: m15-F0 namespace: soybean_structure def: "An inflorescence originating from the axilla of the m15 metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000244 ! Main Stem Inflorescences [Term] id: SOY:0000190 name: m16-F0 namespace: soybean_structure def: "An inflorescence originating from the axilla of the m16 metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000244 ! Main Stem Inflorescences [Term] id: SOY:0000191 name: m1-F1 namespace: soybean_structure def: "An inflorescence associated with the axilla of the first metamer on the shoot originating from the first metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000192 name: m2-F1 namespace: soybean_structure def: "An inflorescence associated with the axilla of the first metamer on the shoot originating from the 2nd metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000193 name: m3-F1 namespace: soybean_structure def: "An inflorescence associated with the axilla of the first metamer on the shoot originating from m3 on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000194 name: m4-F1 namespace: soybean_structure def: "An inflorescence associated with the axilla of the first metamer on the shoot originating from m4 on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000195 name: m5-F1 namespace: soybean_structure def: "An inflorescence associated with the axilla of the first metamer on the shoot originating from m5 on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000196 name: m6-F1 namespace: soybean_structure def: "An inflorescence associated with the axilla of the first metamer on the shoot originating from m6 on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000197 name: m7-F1 namespace: soybean_structure def: "An inflorescence associated with the axilla of the first metamer on the shoot originating from m7 on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000198 name: m8-F1 namespace: soybean_structure def: "An inflorescence associated with the axilla of the first metamer on the shoot originating from m8 on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000199 name: m9-F1 namespace: soybean_structure def: "An inflorescence associated with the axilla of the first metamer on the shoot originating from m9 on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000200 name: m10-F1 namespace: soybean_structure def: "An inflorescence associated with the axilla of the first metamer on the shoot originating from m10 on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000201 name: m11-F1 namespace: soybean_structure def: "An inflorescence associated with the axilla of the first metamer on the shoot originating from m11 on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000202 name: m12-F1 namespace: soybean_structure def: "An inflorescence associated with the axilla of the first metamer on the shoot originating from m12 on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000203 name: m6-F3.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:rtn] is_a: SOY:0000229 ! m6-F3 [Term] id: SOY:0000204 name: m13-F1 namespace: soybean_structure def: "An inflorescence associated with the axilla of the first metamer on the shoot originating from m13 on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000205 name: m14-F1 namespace: soybean_structure def: "An inflorescence associated with the axilla of the first metamer on the shoot originating from m14 on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000206 name: m15-F1 namespace: soybean_structure def: "An inflorescence associated with the axilla of the first metamer on the shoot originating from m15 on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000207 name: m16-F1 namespace: soybean_structure def: "An inflorescence associated with the axilla of the first metamer on the shoot originating from m16 on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000208 name: m1-F2 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 2nd metamer on an axillary shoot originating from the first metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000209 name: m2-F2 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 2nd metamer on an axillary shoot originating from the 2nd metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000210 name: m3-F2 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 2nd metamer on an axillary shoot originating from the 3rd metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000211 name: m4-F2 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 2nd metamer on an axillary shoot originating from the 4th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000212 name: m5-F2 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 2nd metamer on an axillary shoot originating from the 5th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000213 name: m6-F2 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 2nd metamer on an axillary shoot originating from the 6th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000214 name: m7-F2 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 2nd metamer on an axillary shoot originating from the 7th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000215 name: m8-F2 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 2nd metamer on an axillary shoot originating from the 8th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000216 name: m9-F2 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 2nd metamer on an axillary shoot originating from the 9th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000217 name: m10-F2 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 2nd metamer on an axillary shoot originating from the 10th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000218 name: m11-F2 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 2nd metamer on an axillary shoot originating from the 11th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000219 name: m12-F2 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 2nd metamer on an axillary shoot originating from the 11th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000220 name: m13-F2 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 2nd metamer on an axillary shoot originating from the 13th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000221 name: m14-F2 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 2nd metamer on an axillary shoot originating from the 14th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000222 name: m15-F2 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 2nd metamer on an axillary shoot originating from the 15th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000223 name: m16-F2 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 2nd metamer on an axillary shoot originating from the 16th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000224 name: m1-F3 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 3rd metamer on an axillary shoot originating from the first metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000225 name: m2-F3 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 3rd metamer on an axillary shoot originating from the 2nd metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000226 name: m3-F3 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 3rd metamer on an axillary shoot originating from the 3rd metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000227 name: m4-F3 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 3rd metamer on an axillary shoot originating from the 4th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000228 name: m5-F3 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 3rd metamer on an axillary shoot originating from the 5th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000229 name: m6-F3 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 3rd metamer on an axillary shoot originating from the 6th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000230 name: m7-F3 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 3rd metamer on an axillary shoot originating from the 7th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000231 name: m8-F3 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 3rd metamer on an axillary shoot originating from the 8th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000232 name: m9-F3 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 3rd metamer on an axillary shoot originating from the 9th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000233 name: m10-F3 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 3rd metamer on an axillary shoot originating from the 10th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000234 name: m11-F3 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 3rd metamer on an axillary shoot originating from the 11th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000235 name: m12-F3 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 3rd metamer on an axillary shoot originating from the 12th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000236 name: m13-F3 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 3rd metamer on an axillary shoot originating from the 13th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000237 name: m14-F3 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 3rd metamer on an axillary shoot originating from the 14th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000238 name: m15-F3 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 3rd metamer on an axillary shoot originating from the 15th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000239 name: m16-F3 namespace: soybean_structure def: "An inflorescence associated with the axilla of the 3rd metamer on an axillary shoot originating from the 16th metamer on the main stem." [SoyGro:001] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0000242 ! Axillary Inflorescence Structures [Term] id: SOY:0000240 name: Main Stem Structures namespace: soybean_structure def: "Structures of the metamers of the main stem." [SoyGro:rtn] is_a: SOY:0002028 ! Shoot structures [Term] id: SOY:0000241 name: Axillary Shoot Metamers namespace: soybean_structure def: "Development of the metamers of on the axillary shoots of the main stem." [SoyGro:rtn] is_a: SOY:0002027 ! Axilliary stem metamers [Term] id: SOY:0000242 name: Axillary Inflorescence Structures namespace: soybean_structure def: "Inflorescences originating from the axillary shoots." [SoyGro:rtn] synonym: "PO:0006343 Axillary shoot" BROAD [] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0002027 ! Axilliary stem metamers [Term] id: SOY:0000243 name: Main Stem Metamers namespace: soybean_structure def: "Metamers (internodes and nodes) on the main stem." [SoyGro:rtn] synonym: "PO:0020141 Stem node" EXACT [] synonym: "PO:0020142 Stem internode" EXACT [] is_a: SOY:0002026 ! Main stem metamers [Term] id: SOY:0000244 name: Main Stem Inflorescences namespace: soybean_structure def: "Inflorescensces originating from the axilla of nodes on the main stem." [SoyGro:rtn] synonym: "PO:0009049 Inflorescence" RELATED [] is_a: SOY:0002026 ! Main stem metamers [Term] id: SOY:0000245 name: m0 namespace: soybean_structure def: "Metamer associated with the cotyledon of a soybean plant." [SOY:001] synonym: "BBCH scale 100 cotyledons completely unfolded" RELATED [] xref: SoyGro:rtn "Curators" is_a: SOY:0000243 ! Main Stem Metamers [Term] id: SOY:0000246 name: Axillary Shoot Structures namespace: soybean_structure def: "Structures arising from axillary shoots formed from the main stem." [SoyGro:rtn] is_a: SOY:0002028 ! Shoot structures [Term] id: SOY:0000247 name: Leaf Developmental Stages namespace: soybean_development def: "Developmental stages of soybean leaf maturation." [SoyGro:rtn] is_a: SOY:0001650 ! Soybean Development Stages [Term] id: SOY:0000248 name: 0.1 Bud Break namespace: soybean_development def: "Leaf bud visible." [SoyGro:001] xref: PO:PO\:0001051 "leaf initiation stage" is_a: SOY:0000247 ! Leaf Developmental Stages [Term] id: SOY:0000249 name: 0.2 Blades Visible namespace: soybean_development def: "Leaf blades just visble and furled." [SoyGro:001] is_a: SOY:0000247 ! Leaf Developmental Stages [Term] id: SOY:0000250 name: 0.3 leaflets Visible namespace: soybean_development def: "Individual leaflets and petioles visible." [SoyGro:001] is_a: SOY:0000247 ! Leaf Developmental Stages [Term] id: SOY:0000251 name: 0.4 Leaflets Unfurled namespace: soybean_development def: "Leaflets are visible and unfurled." [SoyGro:001] xref: PO:PO\:0001052 "leaf expansion stage" is_a: SOY:0000247 ! Leaf Developmental Stages [Term] id: SOY:0000252 name: 0.5 Leaflets Partially Open namespace: soybean_development def: "Leaflets are visible and partly opened." [SoyGro:001] is_a: SOY:0000247 ! Leaf Developmental Stages [Term] id: SOY:0000253 name: 0.6 Leaflets Half Open namespace: soybean_development def: "Leaflets are unfurled and half opened." [SoyGro:001] is_a: SOY:0000247 ! Leaf Developmental Stages [Term] id: SOY:0000254 name: 0.7 Leaflets Fully Open namespace: soybean_development def: "Leaflets are fully open." [SoyGro:001] synonym: "PO:0001052 2 leaf expansion stage" RELATED [] xref: PO:PO\:0001052 "2 leaf expansion stage" is_a: SOY:0000247 ! Leaf Developmental Stages [Term] id: SOY:0000255 name: 0.8 Leaflets Mature Size namespace: soybean_development def: "Leaflets have obtained mature size." [SoyGro:rtn] synonym: "PO:0001053 3 leaf fully expanded" RELATED [] xref: PO:PO\:0001053 "leaf fully expanded stage" is_a: SOY:0000247 ! Leaf Developmental Stages [Term] id: SOY:0000256 name: 0.9 Leaflets Senescent namespace: soybean_development def: "Leaflets are senescent." [SoyGro:rtn] synonym: "PO:0001054 4 leaf senescence stage" NARROW [] xref: PO:PO\:0001054 "4 leaf senescence stage" is_a: SOY:0000247 ! Leaf Developmental Stages [Term] id: SOY:0000257 name: Pod Developmental Stages namespace: soybean_structure def: "Stages of soybean pod development." [SoyGro:rtn] synonym: "PO:0001002 Fruit development stages" RELATED [] is_obsolete: true [Term] id: SOY:0000258 name: Pod Just Visible namespace: soybean_structure def: "Developing pod is just decernable." [SoyGro:rtn] xref: SoyGro:rtn "Curators" is_obsolete: true [Term] id: SOY:0000259 name: m1.1 namespace: soybean_structure def: "Bud break of the unifoliate leaf." [SOY:001] is_a: SOY:0000100 ! m1 [Term] id: SOY:0000260 name: m1.2 namespace: soybean_structure def: "Blade of the unifoliate leaves visible." [SoyGro:rtn] is_a: SOY:0000100 ! m1 [Term] id: SOY:0000261 name: m1.3 namespace: soybean_structure def: "Unifoliate leaves visible." [SoyGro:rtn] is_a: SOY:0000100 ! m1 [Term] id: SOY:0000262 name: m1.4 namespace: soybean_structure def: "Unifoliate leaves unfurled." [SoyGro:rtn] is_a: SOY:0000100 ! m1 [Term] id: SOY:0000263 name: m1.5 namespace: soybean_structure def: "Unifoliate leaves partially open." [SoyGro:rtn] is_a: SOY:0000100 ! m1 [Term] id: SOY:0000264 name: m1.6 namespace: soybean_structure def: "Unifoliate leaves half open." [SoyGro:rtn] is_a: SOY:0000100 ! m1 [Term] id: SOY:0000265 name: m1.7 namespace: soybean_structure def: "Unifoliate leaves fully open." [SoyGro:rtn] synonym: "BBCH scale 101 First pair of true leaves unfolded" RELATED [] synonym: "BBCH scale 101 Unifoliate leaves unfolded" RELATED [] synonym: "PO:0001053 3 leaf fully expanded" RELATED [] synonym: "PO:0007094 LP.01 one leaf visible" RELATED [] is_a: SOY:0000100 ! m1 [Term] id: SOY:0000266 name: m1.8 namespace: soybean_structure def: "Unifoliate leaves are mature size." [SoyGro:rtn] synonym: "PO:0001053 3 leaf fully expanded" RELATED [] is_a: SOY:0000100 ! m1 [Term] id: SOY:0000267 name: m1.9 namespace: soybean_structure def: "Unifoliate leaves senescent." [SoyGro:rtn] synonym: "PO:0001054 4 leaf senescence stage" RELATED [] is_a: SOY:0000100 ! m1 [Term] id: SOY:0000268 name: m10.1 namespace: soybean_structure def: "Leaf bud is just visible." [SoyGro:rtn] is_a: SOY:0000109 ! m10 [Term] id: SOY:0000269 name: m10.2 namespace: soybean_structure def: "Trifoliate leaf blades visible." [SoyGro:rtn] is_a: SOY:0000109 ! m10 [Term] id: SOY:0000270 name: m10.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000109 ! m10 [Term] id: SOY:0000271 name: m10.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000109 ! m10 [Term] id: SOY:0000272 name: m10.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000109 ! m10 [Term] id: SOY:0000273 name: m10.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000109 ! m10 [Term] id: SOY:0000274 name: m10.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] synonym: "BBCH scale 110 Trifoliolate leaf on tenth node unfolded" RELATED [] synonym: "PO:0007103 LP.10 ten leaves visible" RELATED [] is_a: SOY:0000109 ! m10 [Term] id: SOY:0000275 name: m10.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] synonym: "PO:0001053 3 leaf fully expanded" RELATED [] is_a: SOY:0000109 ! m10 [Term] id: SOY:0000276 name: m10.9 namespace: soybean_structure def: "Leaflets senescent." [SoyGro:rtn] synonym: "PO:0001054 4 leaf senescence stage" RELATED [] is_a: SOY:0000109 ! m10 [Term] id: SOY:0000277 name: m11.1 namespace: soybean_structure def: "Leaf bud just visible." [SoyGro:rtn] is_a: SOY:0000110 ! m11 [Term] id: SOY:0000278 name: m11.2 namespace: soybean_structure def: "Leaflet blades just visible." [SoyGro:rtn] is_a: SOY:0000110 ! m11 [Term] id: SOY:0000279 name: m11.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000110 ! m11 [Term] id: SOY:0000280 name: m11.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000110 ! m11 [Term] id: SOY:0000281 name: m11.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000110 ! m11 [Term] id: SOY:0000282 name: m11.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000110 ! m11 [Term] id: SOY:0000283 name: m11.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] synonym: "BBCH scale 111 Trifoliolate leaf on eleventh node unfolded" RELATED [] synonym: "PO:0007116 LP.11 eleven leaves visible" RELATED [] is_a: SOY:0000110 ! m11 [Term] id: SOY:0000284 name: m11.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] synonym: "PO:0001053 3 leaf fully expanded" RELATED [] is_a: SOY:0000110 ! m11 [Term] id: SOY:0000285 name: m11.9 namespace: soybean_structure def: "Leaflets senescent." [SoyGro:rtn] synonym: "PO:0001054 4 leaf senescence stage" RELATED [] is_a: SOY:0000110 ! m11 [Term] id: SOY:0000286 name: m12.1 namespace: soybean_structure def: "Leaf bud visible." [SoyGro:rtn] is_a: SOY:0000111 ! m12 [Term] id: SOY:0000287 name: m12.2 namespace: soybean_structure def: "Leaflet blades are just visible." [SoyGro:rtn] is_a: SOY:0000111 ! m12 [Term] id: SOY:0000288 name: m12.3 namespace: soybean_structure def: "Leaflets are visible." [SoyGro:rtn] is_a: SOY:0000111 ! m12 [Term] id: SOY:0000289 name: m12.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000111 ! m12 [Term] id: SOY:0000290 name: m12.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000111 ! m12 [Term] id: SOY:0000291 name: m12.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000111 ! m12 [Term] id: SOY:0000292 name: m12.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] synonym: "BBCH scale 112 Trifoliolate leaf on twelveth node unfolded" RELATED [] synonym: "PO:0007064 LP.12 twelve leaves visible" RELATED [] is_a: SOY:0000111 ! m12 [Term] id: SOY:0000293 name: m12.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] synonym: "PO:0001053 3 leaf fully expanded" RELATED [] is_a: SOY:0000111 ! m12 [Term] id: SOY:0000294 name: m12.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] synonym: "PO:0001054 4 leaf senescence stage" RELATED [] is_a: SOY:0000111 ! m12 [Term] id: SOY:0000295 name: m13.1 namespace: soybean_structure def: "Leaf bud visible." [SoyGro:rtn] is_a: SOY:0000112 ! m13 [Term] id: SOY:0000296 name: m13.2 namespace: soybean_structure def: "Leaflet blades visible." [SoyGro:rtn] is_a: SOY:0000112 ! m13 [Term] id: SOY:0000297 name: m13.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000112 ! m13 [Term] id: SOY:0000298 name: m13.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000112 ! m13 [Term] id: SOY:0000299 name: m13.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000112 ! m13 [Term] id: SOY:0000300 name: m13.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000112 ! m13 [Term] id: SOY:0000301 name: m13.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] synonym: "BBCH scale 113 Trifoliolate leaf on the thirteenth node unfolded" RELATED [] synonym: "PO:0007083 LP.13 thirteen leaves visible" RELATED [] is_a: SOY:0000112 ! m13 [Term] id: SOY:0000302 name: m13.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] synonym: "PO:0001053 3 leaf fully expanded" RELATED [] is_a: SOY:0000112 ! m13 [Term] id: SOY:0000303 name: m13.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] synonym: "PO:0001054 4 leaf senescence stage" RELATED [] is_a: SOY:0000112 ! m13 [Term] id: SOY:0000304 name: m14.1 namespace: soybean_structure def: "Leaf bud visible." [SoyGro:rtn] is_a: SOY:0000113 ! m14 [Term] id: SOY:0000305 name: m14.2 namespace: soybean_structure def: "Leaflet blades visible." [SoyGro:rtn] is_a: SOY:0000113 ! m14 [Term] id: SOY:0000306 name: m14.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000113 ! m14 [Term] id: SOY:0000307 name: m14.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000113 ! m14 [Term] id: SOY:0000308 name: m14.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000113 ! m14 [Term] id: SOY:0000309 name: m14.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000113 ! m14 [Term] id: SOY:0000310 name: m14.7 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] synonym: "BBCH scale 114 Trifoliolate leaf on the fourteenth node unfolded" RELATED [] synonym: "PO:0007085 LP.14 fourteen leaves visible" RELATED [] is_a: SOY:0000113 ! m14 [Term] id: SOY:0000311 name: m14.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] synonym: "PO:0001053 3 leaf fully expanded" RELATED [] is_a: SOY:0000113 ! m14 [Term] id: SOY:0000312 name: m14.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] synonym: "PO:0001054 4 leaf senescence stage" RELATED [] is_a: SOY:0000113 ! m14 [Term] id: SOY:0000313 name: m15.1 namespace: soybean_structure def: "Leaf bud visible." [SoyGro:rtn] is_a: SOY:0000114 ! m15 [Term] id: SOY:0000314 name: m15.2 namespace: soybean_structure def: "Leaflet blades visible." [SoyGro:rtn] is_a: SOY:0000114 ! m15 [Term] id: SOY:0000315 name: m15.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000114 ! m15 [Term] id: SOY:0000316 name: m15.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000114 ! m15 [Term] id: SOY:0000317 name: m15.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000114 ! m15 [Term] id: SOY:0000318 name: m15.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000114 ! m15 [Term] id: SOY:0000319 name: m15.7 namespace: soybean_structure def: "Leaflets are fully open." [SoyGro:rtn] synonym: "BBCH scale 115 Trifoliolate leaf on the fifteenth node unfolded" RELATED [] synonym: "PO:0007104 LP.15 fifteen leaves visible" RELATED [] is_a: SOY:0000114 ! m15 [Term] id: SOY:0000320 name: m15.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] synonym: "PO:0001053 3 leaf fully expanded" RELATED [] is_a: SOY:0000114 ! m15 [Term] id: SOY:0000321 name: m15.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] synonym: "PO:0001054 4 leaf senescence stage" RELATED [] is_a: SOY:0000114 ! m15 [Term] id: SOY:0000322 name: m16.1 namespace: soybean_structure def: "Leaf bud visible." [SoyGro:rtn] is_a: SOY:0000115 ! m16 [Term] id: SOY:0000323 name: m16.2 namespace: soybean_structure def: "Leaflet blades visible." [SoyGro:rtn] is_a: SOY:0000115 ! m16 [Term] id: SOY:0000324 name: m16.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000115 ! m16 [Term] id: SOY:0000325 name: m16.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000115 ! m16 [Term] id: SOY:0000326 name: m16.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000115 ! m16 [Term] id: SOY:0000327 name: m16.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000115 ! m16 [Term] id: SOY:0000328 name: m16.7 namespace: soybean_structure def: "Leaflets are fully open." [SoyGro:rtn] synonym: "BBCH scale 116 Trifoliolate leaf on the sixteenth node unfolded" RELATED [] synonym: "PO:0007119 LP.16 sixteen leaves visible" RELATED [] is_a: SOY:0000115 ! m16 [Term] id: SOY:0000329 name: m16.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] synonym: "PO:0001053 3 leaf fully expanded" RELATED [] is_a: SOY:0000115 ! m16 [Term] id: SOY:0000330 name: m16.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] synonym: "PO:0001054 4 leaf senescence stage" RELATED [] is_a: SOY:0000115 ! m16 [Term] id: SOY:0000331 name: m2.1 namespace: soybean_structure def: "Leaf bud visible." [SoyGro:rtn] is_a: SOY:0000101 ! m2 [Term] id: SOY:0000332 name: m2.2 namespace: soybean_structure def: "Leaflet blades visible." [SoyGro:rtn] is_a: SOY:0000101 ! m2 [Term] id: SOY:0000333 name: m2.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000101 ! m2 [Term] id: SOY:0000334 name: m2.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000101 ! m2 [Term] id: SOY:0000335 name: m2.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000101 ! m2 [Term] id: SOY:0000336 name: m2.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000101 ! m2 [Term] id: SOY:0000337 name: m2.7 namespace: soybean_structure def: "Leaflets are fully open." [SoyGro:rtn] synonym: "BBCH scale 102 Trifoliolate leaf on second node unfolded" RELATED [] synonym: "PO:0007098 LP.02 two leaves visible" RELATED [] is_a: SOY:0000101 ! m2 [Term] id: SOY:0000338 name: m2.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] synonym: "PO:0001053 3 leaf fully expanded" RELATED [] is_a: SOY:0000101 ! m2 [Term] id: SOY:0000339 name: m2.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] synonym: "PO:0001054 4 leaf senescence stage" RELATED [] is_a: SOY:0000101 ! m2 [Term] id: SOY:0000340 name: m3.1 namespace: soybean_structure def: "Leaf bud visible." [SoyGro:rtn] is_a: SOY:0000102 ! m3 [Term] id: SOY:0000341 name: m3.2 namespace: soybean_structure def: "Leaflet blades visible." [SoyGro:rtn] is_a: SOY:0000102 ! m3 [Term] id: SOY:0000342 name: m3.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000102 ! m3 [Term] id: SOY:0000343 name: m3.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000102 ! m3 [Term] id: SOY:0000344 name: m3.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000102 ! m3 [Term] id: SOY:0000345 name: m3.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000102 ! m3 [Term] id: SOY:0000346 name: m3.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] synonym: "BBCH scale 103 Trifoliolate leaf on third node unfolded" RELATED [] synonym: "PO:0007106 LP.03 three leaves visible" RELATED [] is_a: SOY:0000102 ! m3 [Term] id: SOY:0000347 name: m3.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] synonym: "PO:0001053 3 leaf fully expanded" RELATED [] is_a: SOY:0000102 ! m3 [Term] id: SOY:0000348 name: m3.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] synonym: "PO:0001054 4 leaf senescence stage" RELATED [] is_a: SOY:0000102 ! m3 [Term] id: SOY:0000349 name: m4.1 namespace: soybean_structure def: "Leaf bud visible." [SoyGro:rtn] is_a: SOY:0000103 ! m4 [Term] id: SOY:0000350 name: m4.2 namespace: soybean_structure def: "Leaflet blades visible." [SoyGro:rtn] is_a: SOY:0000103 ! m4 [Term] id: SOY:0000351 name: m4.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000103 ! m4 [Term] id: SOY:0000352 name: m4.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000103 ! m4 [Term] id: SOY:0000353 name: m4.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000103 ! m4 [Term] id: SOY:0000354 name: m4.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000103 ! m4 [Term] id: SOY:0000355 name: m4.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] synonym: "BBCH scale 104 Trifoliolate leaf on fourth node unfolded" RELATED [] synonym: "PO:0007115 LP.04 four leaves visible" RELATED [] is_a: SOY:0000103 ! m4 [Term] id: SOY:0000356 name: m4.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] synonym: "PO:0001053 3 leaf fully expanded" RELATED [] is_a: SOY:0000103 ! m4 [Term] id: SOY:0000357 name: m4.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] synonym: "PO:0001054 4 leaf senescence stage" RELATED [] is_a: SOY:0000103 ! m4 [Term] id: SOY:0000358 name: m5.1 namespace: soybean_structure def: "Leaf bud visible." [SoyGro:rtn] is_a: SOY:0000104 ! m5 [Term] id: SOY:0000359 name: m5.2 namespace: soybean_structure def: "Leaflet blades visible." [SoyGro:rtn] is_a: SOY:0000104 ! m5 [Term] id: SOY:0000360 name: m5.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000104 ! m5 [Term] id: SOY:0000361 name: m5.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000104 ! m5 [Term] id: SOY:0000362 name: m5.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000104 ! m5 [Term] id: SOY:0000363 name: m5.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000104 ! m5 [Term] id: SOY:0000364 name: m5.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] synonym: "BBCH scale 105 Trifoliolate leaf on fifth node unfolded" RELATED [] synonym: "PO:0007065 LP.05 five leaves visible" RELATED [] is_a: SOY:0000104 ! m5 [Term] id: SOY:0000365 name: m5.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] synonym: "PO:0001053 3 leaf fully expanded" RELATED [] is_a: SOY:0000104 ! m5 [Term] id: SOY:0000366 name: m5.9 namespace: soybean_structure def: "Leaflets senescent." [SoyGro:rtn] synonym: "PO:0001054 4 leaf senescence stage" RELATED [] is_a: SOY:0000104 ! m5 [Term] id: SOY:0000367 name: m6.1 namespace: soybean_structure def: "Leaf bud visible." [SoyGro:rtn] is_a: SOY:0000105 ! m6 [Term] id: SOY:0000368 name: m6.2 namespace: soybean_structure def: "Leaf blades visible." [SoyGro:rtn] is_a: SOY:0000105 ! m6 [Term] id: SOY:0000369 name: m6.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000105 ! m6 [Term] id: SOY:0000370 name: m6.4 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000105 ! m6 [Term] id: SOY:0000371 name: m6.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000105 ! m6 [Term] id: SOY:0000372 name: m6.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000105 ! m6 [Term] id: SOY:0000373 name: m6.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] synonym: "BBCH scale 106 Trifoliolate leaf on sixth node unfolded" RELATED [] synonym: "PO:0007123 LP.06 six leaves visible" RELATED [] is_a: SOY:0000105 ! m6 [Term] id: SOY:0000374 name: m6.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] synonym: "PO:0001053 3 leaf fully expanded" RELATED [] is_a: SOY:0000105 ! m6 [Term] id: SOY:0000375 name: m6.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] synonym: "PO:0001054 4 leaf senescence stage" RELATED [] is_a: SOY:0000105 ! m6 [Term] id: SOY:0000376 name: m7.1 namespace: soybean_structure def: "Leaf bud visible." [SoyGro:rtn] is_a: SOY:0000106 ! m7 [Term] id: SOY:0000377 name: m7.2 namespace: soybean_structure def: "Leaflet blades visible." [SoyGro:rtn] is_a: SOY:0000106 ! m7 [Term] id: SOY:0000378 name: m7.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000106 ! m7 [Term] id: SOY:0000379 name: m7.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000106 ! m7 [Term] id: SOY:0000380 name: m7.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000106 ! m7 [Term] id: SOY:0000381 name: m7.6 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] is_a: SOY:0000106 ! m7 [Term] id: SOY:0000382 name: m7.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] synonym: "BBCH scale 107 Trifoliolate leaf on seventh node unfolded" RELATED [] synonym: "PO:0007063 LP.07 seven leaves visible" RELATED [] is_a: SOY:0000106 ! m7 [Term] id: SOY:0000383 name: m7.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] synonym: "PO:0001053 3 leaf fully expanded" RELATED [] is_a: SOY:0000106 ! m7 [Term] id: SOY:0000384 name: m7.9 namespace: soybean_structure def: "Leaflets are sencescent." [SoyGro:rtn] synonym: "PO:0001054 4 leaf senescence stage" RELATED [] is_a: SOY:0000106 ! m7 [Term] id: SOY:0000385 name: m8.1 namespace: soybean_structure def: "Leaf bud visible." [SoyGro:rtn] is_a: SOY:0000107 ! m8 [Term] id: SOY:0000386 name: m8.2 namespace: soybean_structure def: "Leaflet blades visible." [SoyGro:rtn] is_a: SOY:0000107 ! m8 [Term] id: SOY:0000387 name: m8.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000107 ! m8 [Term] id: SOY:0000388 name: m8.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000107 ! m8 [Term] id: SOY:0000389 name: m8.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000107 ! m8 [Term] id: SOY:0000390 name: m8.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000107 ! m8 [Term] id: SOY:0000391 name: m8.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] synonym: "BBCH scale 108 Trifoliolate leaf on eigth node unfolded" RELATED [] synonym: "PO:0007095 LP.08 eight leaves visible" RELATED [] is_a: SOY:0000107 ! m8 [Term] id: SOY:0000392 name: m8.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] synonym: "PO:0001053 3 leaf fully expanded" RELATED [] is_a: SOY:0000107 ! m8 [Term] id: SOY:0000393 name: m8.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] synonym: "PO:0001054 4 leaf senescence stage" RELATED [] is_a: SOY:0000107 ! m8 [Term] id: SOY:0000394 name: m9.1 namespace: soybean_structure def: "Leaf bud visible." [SoyGro:rtn] is_a: SOY:0000108 ! m9 [Term] id: SOY:0000395 name: m9.2 namespace: soybean_structure def: "Leaflet blades visible." [SoyGro:rtn] is_a: SOY:0000108 ! m9 [Term] id: SOY:0000396 name: m9.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000108 ! m9 [Term] id: SOY:0000397 name: m9.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000108 ! m9 [Term] id: SOY:0000398 name: m9.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000108 ! m9 [Term] id: SOY:0000399 name: m9.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000108 ! m9 [Term] id: SOY:0000400 name: m9.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] synonym: "BBCH scale 109 Trifoliolate leaf on nineth node unfolded" RELATED [] synonym: "PO:0007101 LP.09 nine leaves visible" RELATED [] is_a: SOY:0000108 ! m9 [Term] id: SOY:0000401 name: m9.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] synonym: "PO:0001053 3 leaf fully expanded" RELATED [] is_a: SOY:0000108 ! m9 [Term] id: SOY:0000402 name: m9.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] synonym: "PO:0001054 4 leaf senescene stage" RELATED [] is_a: SOY:0000108 ! m9 [Term] id: SOY:0000403 name: m1-F0.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000175 ! m1-F0 [Term] id: SOY:0000404 name: m1-F0.2 namespace: soybean_structure def: "Flower petals visible." [SoyGro:001] is_a: SOY:0000175 ! m1-F0 [Term] id: SOY:0000405 name: m1-F0.3 namespace: soybean_structure def: "Flower petals visible and flower closed." [SoyGro:001] is_a: SOY:0000175 ! m1-F0 [Term] id: SOY:0000406 name: m1-F0.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000175 ! m1-F0 [Term] id: SOY:0000407 name: m1-F0.5 namespace: soybean_structure def: "Flower petals senescent." [SoyGro:001] is_a: SOY:0000175 ! m1-F0 [Term] id: SOY:0000408 name: m1-F0.6 namespace: soybean_structure def: "Pod visible." [SoyGro:001] is_a: SOY:0000175 ! m1-F0 [Term] id: SOY:0000409 name: m1-F0.7 namespace: soybean_structure def: "Pod small." [SoyGro:001] is_a: SOY:0000175 ! m1-F0 [Term] id: SOY:0000410 name: m1-F0.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000175 ! m1-F0 [Term] id: SOY:0000411 name: m1-F0.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000175 ! m1-F0 [Term] id: SOY:0000412 name: m2-F0.1 namespace: soybean_structure def: "Flower bud visible." [SoyGro:001] is_a: SOY:0000176 ! m2-F0 [Term] id: SOY:0000413 name: m2-F0.2 namespace: soybean_structure def: "Flower petals visible." [SoyGro:001] is_a: SOY:0000176 ! m2-F0 [Term] id: SOY:0000414 name: m2-F0.3 namespace: soybean_structure def: "Flower petals visible and flower closed." [SoyGro:001] is_a: SOY:0000176 ! m2-F0 [Term] id: SOY:0000415 name: m2-F0.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000176 ! m2-F0 [Term] id: SOY:0000416 name: m2-F0.5 namespace: soybean_structure def: "Flower petals senescent." [SoyGro:001] is_a: SOY:0000176 ! m2-F0 [Term] id: SOY:0000417 name: m2-F0.6 namespace: soybean_structure def: "Pod visible." [SoyGro:001] is_a: SOY:0000176 ! m2-F0 [Term] id: SOY:0000418 name: m2-F0.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000176 ! m2-F0 [Term] id: SOY:0000419 name: m2-F0.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000176 ! m2-F0 [Term] id: SOY:0000420 name: m2-F0.9 namespace: soybean_structure def: "Full sized pod." [SoyGro:001] is_a: SOY:0000176 ! m2-F0 [Term] id: SOY:0000421 name: m3-F0.1 namespace: soybean_structure def: "Flower bud visible." [SoyGro:001] is_a: SOY:0000177 ! m3-F0 [Term] id: SOY:0000422 name: m3-F0.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000177 ! m3-F0 [Term] id: SOY:0000423 name: m3-F0.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000177 ! m3-F0 [Term] id: SOY:0000424 name: m3-F0.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000177 ! m3-F0 [Term] id: SOY:0000425 name: m3-F0.5 namespace: soybean_structure def: "Flower petals senescent." [SoyGro:001] is_a: SOY:0000177 ! m3-F0 [Term] id: SOY:0000426 name: m3-F0.6 namespace: soybean_structure def: "Pod visible." [SoyGro:001] is_a: SOY:0000177 ! m3-F0 [Term] id: SOY:0000427 name: m3-F0.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000177 ! m3-F0 [Term] id: SOY:0000428 name: m3-F0.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000177 ! m3-F0 [Term] id: SOY:0000429 name: m3-F0.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000177 ! m3-F0 [Term] id: SOY:0000430 name: m4-F0.1 namespace: soybean_structure def: "Flower bud visible." [SoyGro:001] is_a: SOY:0000178 ! m4-F0 [Term] id: SOY:0000431 name: m4-F0.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000178 ! m4-F0 [Term] id: SOY:0000432 name: m4-F0.3 namespace: soybean_structure def: "Flower petals visible but flower closed." [SoyGro:001] is_a: SOY:0000178 ! m4-F0 [Term] id: SOY:0000433 name: m4-F0.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000178 ! m4-F0 [Term] id: SOY:0000434 name: m4-F0.5 namespace: soybean_structure def: "Flower petals senescent." [SoyGro:001] is_a: SOY:0000178 ! m4-F0 [Term] id: SOY:0000435 name: m4-F0.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000178 ! m4-F0 [Term] id: SOY:0000436 name: m4-F0.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000178 ! m4-F0 [Term] id: SOY:0000437 name: m4-F0.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000178 ! m4-F0 [Term] id: SOY:0000438 name: m4-F0.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000178 ! m4-F0 [Term] id: SOY:0000439 name: m5-F0.1 namespace: soybean_structure def: "Flower bud visible." [SoyGro:001] is_a: SOY:0000179 ! m5-F0 [Term] id: SOY:0000440 name: m5-F0.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000179 ! m5-F0 [Term] id: SOY:0000441 name: m5-F0.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000179 ! m5-F0 [Term] id: SOY:0000442 name: m5-F0.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000179 ! m5-F0 [Term] id: SOY:0000443 name: m5-F0.5 namespace: soybean_structure def: "Flower petals sencescent." [SoyGro:001] is_a: SOY:0000179 ! m5-F0 [Term] id: SOY:0000444 name: m5-F0.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000179 ! m5-F0 [Term] id: SOY:0000445 name: m3-2 namespace: soybean_structure def: "The 2nd metamer (internode and node) forming from an axillary shoot originating from the m3 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000446 name: m5-F0.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000179 ! m5-F0 [Term] id: SOY:0000447 name: m5-F0.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000179 ! m5-F0 [Term] id: SOY:0000448 name: m5-F0.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000179 ! m5-F0 [Term] id: SOY:0000449 name: m6-F0.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000179 ! m5-F0 [Term] id: SOY:0000450 name: m6-F0.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000179 ! m5-F0 [Term] id: SOY:0000451 name: m6-F0.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000179 ! m5-F0 [Term] id: SOY:0000452 name: m6-F0.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000179 ! m5-F0 [Term] id: SOY:0000453 name: m6-F0.5 namespace: soybean_structure def: "Flower petals sencesent." [SoyGro:001] is_a: SOY:0000179 ! m5-F0 [Term] id: SOY:0000454 name: m6-F0.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000179 ! m5-F0 [Term] id: SOY:0000455 name: m6-F0.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000179 ! m5-F0 [Term] id: SOY:0000456 name: m6-F0.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000179 ! m5-F0 [Term] id: SOY:0000457 name: m6-F0.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000179 ! m5-F0 [Term] id: SOY:0000458 name: m7-F0.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000181 ! m7-F0 [Term] id: SOY:0000459 name: m7-F0.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000181 ! m7-F0 [Term] id: SOY:0000460 name: m7-F0.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000181 ! m7-F0 [Term] id: SOY:0000461 name: m7-F0.4 namespace: soybean_structure def: "Flower petals open but flower is closed." [SoyGro:001] is_a: SOY:0000181 ! m7-F0 [Term] id: SOY:0000462 name: m7-F0.5 namespace: soybean_structure def: "Flower petals senescent." [SoyGro:001] is_a: SOY:0000181 ! m7-F0 [Term] id: SOY:0000463 name: m7-F0.6 namespace: soybean_structure def: "Pod visible." [SoyGro:001] is_a: SOY:0000181 ! m7-F0 [Term] id: SOY:0000464 name: m7-F0.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000181 ! m7-F0 [Term] id: SOY:0000465 name: m7-F0.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000181 ! m7-F0 [Term] id: SOY:0000466 name: m7-F0.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000181 ! m7-F0 [Term] id: SOY:0000467 name: m8-F0.1 namespace: soybean_structure def: "Flower bud visible." [SoyGro:001] is_a: SOY:0000182 ! m8-F0 [Term] id: SOY:0000468 name: m8-F0.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000182 ! m8-F0 [Term] id: SOY:0000469 name: m8-F0.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000182 ! m8-F0 [Term] id: SOY:0000470 name: m8-F0.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000182 ! m8-F0 [Term] id: SOY:0000471 name: m8-F0.5 namespace: soybean_structure def: "Flower petals senescent." [SoyGro:001] is_a: SOY:0000182 ! m8-F0 [Term] id: SOY:0000472 name: m8-F0.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000182 ! m8-F0 [Term] id: SOY:0000473 name: m8-F0.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000182 ! m8-F0 [Term] id: SOY:0000474 name: m8-F0.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000182 ! m8-F0 [Term] id: SOY:0000475 name: m8-F0.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000182 ! m8-F0 [Term] id: SOY:0000476 name: m9-F0.1 namespace: soybean_structure def: "Flower bud visible." [SoyGro:001] is_a: SOY:0000183 ! m9-F0 [Term] id: SOY:0000477 name: m9-F0.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000183 ! m9-F0 [Term] id: SOY:0000478 name: m9-F0.3 namespace: soybean_structure def: "Flower petals visible but flower closed." [SoyGro:001] is_a: SOY:0000183 ! m9-F0 [Term] id: SOY:0000479 name: m9-F0.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000183 ! m9-F0 [Term] id: SOY:0000480 name: m9-F0.5 namespace: soybean_structure def: "Flower petals senescent." [SoyGro:001] is_a: SOY:0000183 ! m9-F0 [Term] id: SOY:0000481 name: m9-F0.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000183 ! m9-F0 [Term] id: SOY:0000482 name: m9-F0.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000183 ! m9-F0 [Term] id: SOY:0000483 name: m9-F0.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000183 ! m9-F0 [Term] id: SOY:0000484 name: m9-F0.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000183 ! m9-F0 [Term] id: SOY:0000485 name: m10-F0.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000184 ! m10-F0 [Term] id: SOY:0000486 name: m10-F0.2 namespace: soybean_structure def: "Flower petals visible." [SoyGro:001] is_a: SOY:0000184 ! m10-F0 [Term] id: SOY:0000487 name: m10-F0.3 namespace: soybean_structure def: "Flower petals visible but flower closed." [SoyGro:001] is_a: SOY:0000184 ! m10-F0 [Term] id: SOY:0000488 name: m10-F0.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000184 ! m10-F0 [Term] id: SOY:0000489 name: m10-F0.5 namespace: soybean_structure def: "Flower petals senescent." [SoyGro:001] is_a: SOY:0000184 ! m10-F0 [Term] id: SOY:0000490 name: m10-F0.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000184 ! m10-F0 [Term] id: SOY:0000491 name: m10-F0.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000184 ! m10-F0 [Term] id: SOY:0000492 name: m10-F0.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000184 ! m10-F0 [Term] id: SOY:0000493 name: m10-F0.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000184 ! m10-F0 [Term] id: SOY:0000494 name: m11-F0.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000185 ! m11-F0 [Term] id: SOY:0000495 name: m11-F0.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000185 ! m11-F0 [Term] id: SOY:0000496 name: m11-F0.3 namespace: soybean_structure def: "Flower petals visible but flower closed." [SoyGro:001] is_a: SOY:0000185 ! m11-F0 [Term] id: SOY:0000497 name: m11-F0.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000185 ! m11-F0 [Term] id: SOY:0000498 name: m11-F0.5 namespace: soybean_structure def: "Flower petals senescent." [SoyGro:001] is_a: SOY:0000185 ! m11-F0 [Term] id: SOY:0000499 name: m11-F0.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000185 ! m11-F0 [Term] id: SOY:0000500 name: m11-F0.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000185 ! m11-F0 [Term] id: SOY:0000501 name: m11-F0.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000185 ! m11-F0 [Term] id: SOY:0000502 name: m11-F0.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000185 ! m11-F0 [Term] id: SOY:0000503 name: m12-F0.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000186 ! m12-F0 [Term] id: SOY:0000504 name: m12-F0.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000186 ! m12-F0 [Term] id: SOY:0000505 name: m12-F0.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000186 ! m12-F0 [Term] id: SOY:0000506 name: m9-2 namespace: soybean_structure def: "The 2nd metamer (internode and node) forming from an axillary shoot originating from the m9 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000507 name: m12-F0.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000186 ! m12-F0 [Term] id: SOY:0000508 name: m12-F0.5 namespace: soybean_structure def: "Flower petals senescent." [SoyGro:001] is_a: SOY:0000186 ! m12-F0 [Term] id: SOY:0000509 name: m12-F0.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000186 ! m12-F0 [Term] id: SOY:0000510 name: m12-F0.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000186 ! m12-F0 [Term] id: SOY:0000511 name: m12-F0.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000186 ! m12-F0 [Term] id: SOY:0000512 name: m12-F0.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000186 ! m12-F0 [Term] id: SOY:0000513 name: m13-F0.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000187 ! m13-F0 [Term] id: SOY:0000514 name: m13-F0.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000187 ! m13-F0 [Term] id: SOY:0000515 name: m13-F0.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000187 ! m13-F0 [Term] id: SOY:0000516 name: m13-F0.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000187 ! m13-F0 [Term] id: SOY:0000517 name: m13-F0.5 namespace: soybean_structure def: "Flower petals scenescent." [SoyGro:001] is_a: SOY:0000187 ! m13-F0 [Term] id: SOY:0000518 name: m13-F0.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000187 ! m13-F0 [Term] id: SOY:0000519 name: m13-F0.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000187 ! m13-F0 [Term] id: SOY:0000520 name: m13-F0.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000187 ! m13-F0 [Term] id: SOY:0000521 name: m13-F0.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000187 ! m13-F0 [Term] id: SOY:0000522 name: m14-F0.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000188 ! m14-F0 [Term] id: SOY:0000523 name: m14-F0.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000188 ! m14-F0 [Term] id: SOY:0000524 name: m14-F0.3 namespace: soybean_structure def: "Flower petals visible but flower closed." [SoyGro:001] is_a: SOY:0000188 ! m14-F0 [Term] id: SOY:0000525 name: m14-F0.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000188 ! m14-F0 [Term] id: SOY:0000526 name: m14-F0.5 namespace: soybean_structure def: "Flower petals senescent." [SoyGro:001] is_a: SOY:0000188 ! m14-F0 [Term] id: SOY:0000527 name: m14-F0.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000188 ! m14-F0 [Term] id: SOY:0000528 name: m14-F0.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000188 ! m14-F0 [Term] id: SOY:0000529 name: m14-F0.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000188 ! m14-F0 [Term] id: SOY:0000530 name: m14-F0.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000188 ! m14-F0 [Term] id: SOY:0000531 name: m15-F0.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000189 ! m15-F0 [Term] id: SOY:0000532 name: m15-F0.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000189 ! m15-F0 [Term] id: SOY:0000533 name: m15-F0.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000189 ! m15-F0 [Term] id: SOY:0000534 name: m15-F0.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000189 ! m15-F0 [Term] id: SOY:0000535 name: m15-F0.5 namespace: soybean_structure def: "Flower petals senescent." [SoyGro:001] is_a: SOY:0000189 ! m15-F0 [Term] id: SOY:0000536 name: m15-F0.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000189 ! m15-F0 [Term] id: SOY:0000537 name: m15-F0.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000189 ! m15-F0 [Term] id: SOY:0000538 name: m15-F0.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000189 ! m15-F0 [Term] id: SOY:0000539 name: m15-F0.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000189 ! m15-F0 [Term] id: SOY:0000540 name: m16-F0.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000190 ! m16-F0 [Term] id: SOY:0000541 name: m16-F0.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000190 ! m16-F0 [Term] id: SOY:0000542 name: m16-F0.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000190 ! m16-F0 [Term] id: SOY:0000543 name: m16-F0.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000190 ! m16-F0 [Term] id: SOY:0000544 name: m16-F0.5 namespace: soybean_structure def: "Flower petals senescent." [SoyGro:001] is_a: SOY:0000190 ! m16-F0 [Term] id: SOY:0000545 name: m16-F0.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000190 ! m16-F0 [Term] id: SOY:0000546 name: m16-F0.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000190 ! m16-F0 [Term] id: SOY:0000547 name: m16-F0.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000190 ! m16-F0 [Term] id: SOY:0000548 name: m16-F0.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000190 ! m16-F0 [Term] id: SOY:0000549 name: m1-1.1 namespace: soybean_structure def: "Leaf bud visible." [SoyGro:rtn] is_a: SOY:0000116 ! m1-1 [Term] id: SOY:0000550 name: m1-1.2 namespace: soybean_structure def: "Leaflet blades visible." [SoyGro:rtn] is_a: SOY:0000116 ! m1-1 [Term] id: SOY:0000551 name: m1-1.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000116 ! m1-1 [Term] id: SOY:0000552 name: m1-1.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000116 ! m1-1 [Term] id: SOY:0000553 name: m1-1.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000116 ! m1-1 [Term] id: SOY:0000554 name: m1-1.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000116 ! m1-1 [Term] id: SOY:0000555 name: m1-1.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] is_a: SOY:0000116 ! m1-1 [Term] id: SOY:0000556 name: m1-1.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000116 ! m1-1 [Term] id: SOY:0000557 name: m1-1.9 namespace: soybean_structure def: "Leaflets are scenescent." [SoyGro:rtn] is_a: SOY:0000116 ! m1-1 [Term] id: SOY:0000558 name: m1-2.1 namespace: soybean_structure def: "Leaf bud visible." [SoyGro:rtn] is_a: SOY:0000132 ! m1-2 [Term] id: SOY:0000559 name: m1-2.2 namespace: soybean_structure def: "Leaflet blades visible." [SoyGro:rtn] is_a: SOY:0000132 ! m1-2 [Term] id: SOY:0000560 name: m1-2.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000132 ! m1-2 [Term] id: SOY:0000561 name: m1-2.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000132 ! m1-2 [Term] id: SOY:0000562 name: m1-2.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000132 ! m1-2 [Term] id: SOY:0000563 name: m1-2.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000132 ! m1-2 [Term] id: SOY:0000564 name: m1-2.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] is_a: SOY:0000132 ! m1-2 [Term] id: SOY:0000565 name: m1-2.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000132 ! m1-2 [Term] id: SOY:0000566 name: m1-2.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000132 ! m1-2 [Term] id: SOY:0000567 name: m1-3.1 namespace: soybean_structure def: "Leaf bud visible." [SoyGro:rtn] is_a: SOY:0000146 ! m1-3 [Term] id: SOY:0000568 name: m1-3.2 namespace: soybean_structure def: "Leaflet blades visible." [SoyGro:rtn] is_a: SOY:0000146 ! m1-3 [Term] id: SOY:0000569 name: m1-3.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000146 ! m1-3 [Term] id: SOY:0000570 name: m1-3.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000146 ! m1-3 [Term] id: SOY:0000571 name: m1-3.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000146 ! m1-3 [Term] id: SOY:0000572 name: m1-3.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000146 ! m1-3 [Term] id: SOY:0000573 name: m1-3.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] is_a: SOY:0000146 ! m1-3 [Term] id: SOY:0000574 name: m1-3.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000146 ! m1-3 [Term] id: SOY:0000575 name: m1-3.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000146 ! m1-3 [Term] id: SOY:0000576 name: m1-F1.1 namespace: soybean_structure def: "Flower bud visible." [SoyGro:rtn] is_a: SOY:0000191 ! m1-F1 [Term] id: SOY:0000577 name: m1-F1.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:rtn] is_a: SOY:0000191 ! m1-F1 [Term] id: SOY:0000578 name: m1-F1.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:rtn] is_a: SOY:0000191 ! m1-F1 [Term] id: SOY:0000579 name: m1-F1.4 namespace: soybean_structure def: "Flower open." [SoyGro:rtn] is_a: SOY:0000191 ! m1-F1 [Term] id: SOY:0000580 name: m1-F1.5 namespace: soybean_structure def: "Petals sencescent." [SoyGro:rtn] is_a: SOY:0000191 ! m1-F1 [Term] id: SOY:0000581 name: m1-F1.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:rtn] is_a: SOY:0000191 ! m1-F1 [Term] id: SOY:0000582 name: m1-F1.7 namespace: soybean_structure def: "Small size pod." [SoyGro:rtn] is_a: SOY:0000191 ! m1-F1 [Term] id: SOY:0000583 name: m1-F1.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:rtn] is_a: SOY:0000191 ! m1-F1 [Term] id: SOY:0000584 name: m1-F1.9 namespace: soybean_structure def: "Full size pod." [SoyGro:rtn] is_a: SOY:0000191 ! m1-F1 [Term] id: SOY:0000585 name: m1-F2.1 namespace: soybean_structure def: "Flower bud visible." [SoyGro:001] is_a: SOY:0000208 ! m1-F2 [Term] id: SOY:0000586 name: m1-F2.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000208 ! m1-F2 [Term] id: SOY:0000587 name: m1-F2.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000208 ! m1-F2 [Term] id: SOY:0000588 name: m1-F2.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000208 ! m1-F2 [Term] id: SOY:0000589 name: m1-F2.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000208 ! m1-F2 [Term] id: SOY:0000590 name: m1-F2.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000208 ! m1-F2 [Term] id: SOY:0000591 name: m1-F2.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000208 ! m1-F2 [Term] id: SOY:0000592 name: m1.F2.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000208 ! m1-F2 [Term] id: SOY:0000593 name: m1-F2.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000208 ! m1-F2 [Term] id: SOY:0000594 name: m1-F3.1 namespace: soybean_structure def: "Flower bud visible." [SoyGro:001] is_a: SOY:0000224 ! m1-F3 [Term] id: SOY:0000595 name: m1-F3.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000224 ! m1-F3 [Term] id: SOY:0000596 name: m1-F3.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000224 ! m1-F3 [Term] id: SOY:0000597 name: m1-F3.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000224 ! m1-F3 [Term] id: SOY:0000598 name: m1-F3.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000224 ! m1-F3 [Term] id: SOY:0000599 name: m1-F3.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000224 ! m1-F3 [Term] id: SOY:0000600 name: m1-F3.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000224 ! m1-F3 [Term] id: SOY:0000601 name: m1-F3.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000224 ! m1-F3 [Term] id: SOY:0000602 name: m1-F3.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000224 ! m1-F3 [Term] id: SOY:0000603 name: m10-F1.1 namespace: soybean_structure def: "Flower bud is just visible." [SoyGro:001] is_a: SOY:0000200 ! m10-F1 [Term] id: SOY:0000604 name: m10-F1.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000200 ! m10-F1 [Term] id: SOY:0000605 name: m10-F1.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000200 ! m10-F1 [Term] id: SOY:0000606 name: m10-F1.4 namespace: soybean_structure def: "Flower is open." [SoyGro:001] is_a: SOY:0000200 ! m10-F1 [Term] id: SOY:0000607 name: m10-F1.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000200 ! m10-F1 [Term] id: SOY:0000608 name: m10-F1.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000200 ! m10-F1 [Term] id: SOY:0000609 name: m10-F1.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000200 ! m10-F1 [Term] id: SOY:0000610 name: m10-F1.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000200 ! m10-F1 [Term] id: SOY:0000611 name: m10-F1.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000200 ! m10-F1 [Term] id: SOY:0000612 name: m10-F2.1 namespace: soybean_structure def: "Flower bud visible." [SoyGro:001] is_a: SOY:0000217 ! m10-F2 [Term] id: SOY:0000613 name: m10-F2.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000217 ! m10-F2 [Term] id: SOY:0000614 name: m10-F2.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000217 ! m10-F2 [Term] id: SOY:0000615 name: m10-F2.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000217 ! m10-F2 [Term] id: SOY:0000616 name: m10-F2.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000217 ! m10-F2 [Term] id: SOY:0000617 name: m4-3 namespace: soybean_structure def: "The 3rd metamer (internode and node) forming from an axillary shoot originating from the m4 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000618 name: m10-F2.6 namespace: soybean_structure def: "Petals just visible." [SoyGro:001] is_a: SOY:0000217 ! m10-F2 [Term] id: SOY:0000619 name: m10-F2.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000217 ! m10-F2 [Term] id: SOY:0000620 name: m10-F2.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000217 ! m10-F2 [Term] id: SOY:0000621 name: m10-F2.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000217 ! m10-F2 [Term] id: SOY:0000622 name: m10-F3.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000233 ! m10-F3 [Term] id: SOY:0000623 name: m10-F3.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000233 ! m10-F3 [Term] id: SOY:0000624 name: m10-F3.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000233 ! m10-F3 [Term] id: SOY:0000625 name: m10-F3.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000233 ! m10-F3 [Term] id: SOY:0000626 name: m10-F3.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000233 ! m10-F3 [Term] id: SOY:0000627 name: m10-F3.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000233 ! m10-F3 [Term] id: SOY:0000628 name: m5-3 namespace: soybean_structure def: "The 3rd metamer (internode and node) forming from an axillary shoot originating from the m5 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000629 name: m10-F3.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000233 ! m10-F3 [Term] id: SOY:0000630 name: m10-F3.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000233 ! m10-F3 [Term] id: SOY:0000631 name: m10-F3.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000233 ! m10-F3 [Term] id: SOY:0000632 name: m11-F1.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000201 ! m11-F1 [Term] id: SOY:0000633 name: m11-F1.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000201 ! m11-F1 [Term] id: SOY:0000634 name: m11-F1.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000201 ! m11-F1 [Term] id: SOY:0000635 name: m11-F1.4 namespace: soybean_structure def: "Flower oepn." [SoyGro:001] is_a: SOY:0000201 ! m11-F1 [Term] id: SOY:0000636 name: m11-F1.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000201 ! m11-F1 [Term] id: SOY:0000637 name: m11-F1.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000201 ! m11-F1 [Term] id: SOY:0000638 name: m11-F1.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000201 ! m11-F1 [Term] id: SOY:0000639 name: m6-3 namespace: soybean_structure def: "The 3rd metamer (internode and node) forming from an axillary shoot originating from the m6 metamer on the main shoot." [SoyGro:001] synonym: "PO:0006343 axillary shoot" BROAD [] synonym: "PO:0020141 Stem node" BROAD [] synonym: "PO:0020142 Stem internode" BROAD [] is_a: SOY:0000241 ! Axillary Shoot Metamers [Term] id: SOY:0000640 name: m11-F1.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000201 ! m11-F1 [Term] id: SOY:0000641 name: m11-F1.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000201 ! m11-F1 [Term] id: SOY:0000642 name: m11-F2.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000218 ! m11-F2 [Term] id: SOY:0000643 name: m11-F2.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000218 ! m11-F2 [Term] id: SOY:0000644 name: m11-F2.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000218 ! m11-F2 [Term] id: SOY:0000645 name: m11-F2.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000218 ! m11-F2 [Term] id: SOY:0000646 name: m11-F2.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000218 ! m11-F2 [Term] id: SOY:0000647 name: m11-F2.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000218 ! m11-F2 [Term] id: SOY:0000648 name: m11-F2.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000218 ! m11-F2 [Term] id: SOY:0000649 name: m11-F2.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000218 ! m11-F2 [Term] id: SOY:0000650 name: m11-F2.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000218 ! m11-F2 [Term] id: SOY:0000651 name: m11-F3.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000234 ! m11-F3 [Term] id: SOY:0000652 name: m11-F3.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000234 ! m11-F3 [Term] id: SOY:0000653 name: m11-F3.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000234 ! m11-F3 [Term] id: SOY:0000654 name: m11-F3.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000234 ! m11-F3 [Term] id: SOY:0000655 name: m11-F3.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000234 ! m11-F3 [Term] id: SOY:0000656 name: m11-F3.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000234 ! m11-F3 [Term] id: SOY:0000657 name: m11-F3.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000234 ! m11-F3 [Term] id: SOY:0000658 name: m11-F3.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000234 ! m11-F3 [Term] id: SOY:0000659 name: m11-F3.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000234 ! m11-F3 [Term] id: SOY:0000660 name: m12-F1.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000202 ! m12-F1 [Term] id: SOY:0000661 name: m12-F1.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000202 ! m12-F1 [Term] id: SOY:0000662 name: m12-F1.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000202 ! m12-F1 [Term] id: SOY:0000663 name: m12-F1.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000202 ! m12-F1 [Term] id: SOY:0000664 name: m12-F1.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000202 ! m12-F1 [Term] id: SOY:0000665 name: m12-F1.6 namespace: soybean_structure def: "Pod is just visible." [SoyGro:001] is_a: SOY:0000202 ! m12-F1 [Term] id: SOY:0000666 name: m12-F1.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000202 ! m12-F1 [Term] id: SOY:0000667 name: m12-F1.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000202 ! m12-F1 [Term] id: SOY:0000668 name: m12-F1.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000202 ! m12-F1 [Term] id: SOY:0000669 name: m12-F2.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000219 ! m12-F2 [Term] id: SOY:0000670 name: m12-F2.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000219 ! m12-F2 [Term] id: SOY:0000671 name: m12-F2.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000219 ! m12-F2 [Term] id: SOY:0000672 name: m12-F2.4 namespace: soybean_structure def: "Flower is open." [SoyGro:001] is_a: SOY:0000219 ! m12-F2 [Term] id: SOY:0000673 name: m12-F2.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000219 ! m12-F2 [Term] id: SOY:0000674 name: m12-F2.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000219 ! m12-F2 [Term] id: SOY:0000675 name: m12-F2.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000219 ! m12-F2 [Term] id: SOY:0000676 name: m12-F2.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000219 ! m12-F2 [Term] id: SOY:0000677 name: m12-F2.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000219 ! m12-F2 [Term] id: SOY:0000678 name: m12-F3.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000235 ! m12-F3 [Term] id: SOY:0000679 name: m12-F3.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000235 ! m12-F3 [Term] id: SOY:0000680 name: m12-F3.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000235 ! m12-F3 [Term] id: SOY:0000681 name: m12-F3.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000235 ! m12-F3 [Term] id: SOY:0000682 name: m12-F3.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000235 ! m12-F3 [Term] id: SOY:0000683 name: m12-F3.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000235 ! m12-F3 [Term] id: SOY:0000684 name: m12-F3.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000235 ! m12-F3 [Term] id: SOY:0000685 name: m12-F3.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000235 ! m12-F3 [Term] id: SOY:0000686 name: m12-F3.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000235 ! m12-F3 [Term] id: SOY:0000687 name: m13-F1.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000204 ! m13-F1 [Term] id: SOY:0000688 name: m13-F1.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000204 ! m13-F1 [Term] id: SOY:0000689 name: m13-F1.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000204 ! m13-F1 [Term] id: SOY:0000690 name: m13-F1.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000204 ! m13-F1 [Term] id: SOY:0000691 name: m13-F1.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000204 ! m13-F1 [Term] id: SOY:0000692 name: m13-F1.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000204 ! m13-F1 [Term] id: SOY:0000693 name: m13-F1.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000204 ! m13-F1 [Term] id: SOY:0000694 name: m13-F1.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000204 ! m13-F1 [Term] id: SOY:0000695 name: m13-F1.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000204 ! m13-F1 [Term] id: SOY:0000696 name: m13-F2.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000220 ! m13-F2 [Term] id: SOY:0000697 name: m13-F2.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000220 ! m13-F2 [Term] id: SOY:0000698 name: m13-F2.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000220 ! m13-F2 [Term] id: SOY:0000699 name: m13-F2.4 namespace: soybean_structure def: "Flower is open." [SoyGro:001] is_a: SOY:0000220 ! m13-F2 [Term] id: SOY:0000700 name: m13-F2.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000220 ! m13-F2 [Term] id: SOY:0000701 name: m13-F2.6 namespace: soybean_structure def: "Pod is just visible." [SoyGro:001] is_a: SOY:0000220 ! m13-F2 [Term] id: SOY:0000702 name: m13-F2.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000220 ! m13-F2 [Term] id: SOY:0000703 name: m13-F2.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000220 ! m13-F2 [Term] id: SOY:0000704 name: m13-F2.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000220 ! m13-F2 [Term] id: SOY:0000705 name: m13-F3.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000236 ! m13-F3 [Term] id: SOY:0000706 name: m13-F3.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000236 ! m13-F3 [Term] id: SOY:0000707 name: m13-F3.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000236 ! m13-F3 [Term] id: SOY:0000708 name: m13-F3.4 namespace: soybean_structure def: "Flower is open." [SoyGro:001] is_a: SOY:0000236 ! m13-F3 [Term] id: SOY:0000709 name: m13-F3.5 namespace: soybean_structure def: "Petal senescent." [SoyGro:001] is_a: SOY:0000236 ! m13-F3 [Term] id: SOY:0000710 name: m13-F3.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000236 ! m13-F3 [Term] id: SOY:0000711 name: m13-F3.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000236 ! m13-F3 [Term] id: SOY:0000712 name: m13-F3.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000236 ! m13-F3 [Term] id: SOY:0000713 name: m13-F3.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000236 ! m13-F3 [Term] id: SOY:0000714 name: m14-F1.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000205 ! m14-F1 [Term] id: SOY:0000715 name: m14-F1.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000205 ! m14-F1 [Term] id: SOY:0000716 name: m14-F1.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000205 ! m14-F1 [Term] id: SOY:0000717 name: m14-F1.4 namespace: soybean_structure def: "Flower is open." [SoyGro:001] is_a: SOY:0000205 ! m14-F1 [Term] id: SOY:0000718 name: m14-F1.5 namespace: soybean_structure def: "Petals are senescent." [SoyGro:001] is_a: SOY:0000205 ! m14-F1 [Term] id: SOY:0000719 name: m14-F1.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000205 ! m14-F1 [Term] id: SOY:0000720 name: m14-F1.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000205 ! m14-F1 [Term] id: SOY:0000721 name: m14-F1.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000205 ! m14-F1 [Term] id: SOY:0000722 name: m14-F1.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000205 ! m14-F1 [Term] id: SOY:0000723 name: m14-F2.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000221 ! m14-F2 [Term] id: SOY:0000724 name: m14-F2.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000221 ! m14-F2 [Term] id: SOY:0000725 name: m14-F2.3 namespace: soybean_structure def: "Flower petals visible but flower is close." [SoyGro:001] is_a: SOY:0000221 ! m14-F2 [Term] id: SOY:0000726 name: m14-F2.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000221 ! m14-F2 [Term] id: SOY:0000727 name: m14-F2.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000221 ! m14-F2 [Term] id: SOY:0000728 name: m14-F2.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000221 ! m14-F2 [Term] id: SOY:0000729 name: m14-F2.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000221 ! m14-F2 [Term] id: SOY:0000730 name: m14-F2.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000221 ! m14-F2 [Term] id: SOY:0000731 name: m14-F2.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000221 ! m14-F2 [Term] id: SOY:0000732 name: m14-F3.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000237 ! m14-F3 [Term] id: SOY:0000733 name: m14-F3.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000237 ! m14-F3 [Term] id: SOY:0000734 name: m14-F3.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000237 ! m14-F3 [Term] id: SOY:0000735 name: m14-F3.4 namespace: soybean_structure def: "Flower is open." [SoyGro:001] is_a: SOY:0000237 ! m14-F3 [Term] id: SOY:0000736 name: m14-F3.5 namespace: soybean_structure def: "Petals are senescent." [SoyGro:001] is_a: SOY:0000237 ! m14-F3 [Term] id: SOY:0000737 name: m14-F3.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000237 ! m14-F3 [Term] id: SOY:0000738 name: m14-F3.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000237 ! m14-F3 [Term] id: SOY:0000739 name: m14-F3.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000237 ! m14-F3 [Term] id: SOY:0000740 name: m14-F3.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000237 ! m14-F3 [Term] id: SOY:0000741 name: m15-F1.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000206 ! m15-F1 [Term] id: SOY:0000742 name: m15-F1.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000206 ! m15-F1 [Term] id: SOY:0000743 name: m15-F1.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000206 ! m15-F1 [Term] id: SOY:0000744 name: m15-F1.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000206 ! m15-F1 [Term] id: SOY:0000745 name: m15-F1.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000206 ! m15-F1 [Term] id: SOY:0000746 name: m15-F1.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000206 ! m15-F1 [Term] id: SOY:0000747 name: m15-F1.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000206 ! m15-F1 [Term] id: SOY:0000748 name: m15-F1.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000206 ! m15-F1 [Term] id: SOY:0000749 name: m15-F1.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000206 ! m15-F1 [Term] id: SOY:0000750 name: m15-F2.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000222 ! m15-F2 [Term] id: SOY:0000751 name: m15-F2.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000222 ! m15-F2 [Term] id: SOY:0000752 name: m15-F2.3 namespace: soybean_structure def: "Flower petals visible but flower is close." [SoyGro:001] is_a: SOY:0000222 ! m15-F2 [Term] id: SOY:0000753 name: m15-F2.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000222 ! m15-F2 [Term] id: SOY:0000754 name: m15-F2.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000222 ! m15-F2 [Term] id: SOY:0000755 name: m15-F2.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000222 ! m15-F2 [Term] id: SOY:0000756 name: m15-F2.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000222 ! m15-F2 [Term] id: SOY:0000757 name: m15-F2.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000222 ! m15-F2 [Term] id: SOY:0000758 name: m15-F2.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000222 ! m15-F2 [Term] id: SOY:0000759 name: m15-F3.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000238 ! m15-F3 [Term] id: SOY:0000760 name: m15-F3.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000238 ! m15-F3 [Term] id: SOY:0000761 name: m15-F3.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000238 ! m15-F3 [Term] id: SOY:0000762 name: m15-F3.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000238 ! m15-F3 [Term] id: SOY:0000763 name: m15-F3.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000238 ! m15-F3 [Term] id: SOY:0000764 name: m15-F3.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000238 ! m15-F3 [Term] id: SOY:0000765 name: m15-F3.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000238 ! m15-F3 [Term] id: SOY:0000766 name: m15-F3.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000238 ! m15-F3 [Term] id: SOY:0000767 name: m15-F3.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000238 ! m15-F3 [Term] id: SOY:0000768 name: m16-F1.1 namespace: soybean_structure def: "Flower bud visible." [SoyGro:001] is_a: SOY:0000207 ! m16-F1 [Term] id: SOY:0000769 name: m16-F1.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000207 ! m16-F1 [Term] id: SOY:0000770 name: m16-F1.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000207 ! m16-F1 [Term] id: SOY:0000771 name: m16-F1.4 namespace: soybean_structure def: "Flower is open." [SoyGro:001] is_a: SOY:0000207 ! m16-F1 [Term] id: SOY:0000772 name: m16-F1.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000207 ! m16-F1 [Term] id: SOY:0000773 name: m16-F1.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000207 ! m16-F1 [Term] id: SOY:0000774 name: m16-F1.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000207 ! m16-F1 [Term] id: SOY:0000775 name: m16-F1.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000207 ! m16-F1 [Term] id: SOY:0000776 name: m16-F1.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000207 ! m16-F1 [Term] id: SOY:0000777 name: m16-F2.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000223 ! m16-F2 [Term] id: SOY:0000778 name: m16-F2.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000223 ! m16-F2 [Term] id: SOY:0000779 name: m16-F2.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000223 ! m16-F2 [Term] id: SOY:0000780 name: m16-F2.4 namespace: soybean_structure def: "Flower is open." [SoyGro:001] is_a: SOY:0000223 ! m16-F2 [Term] id: SOY:0000781 name: m16-F2.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000223 ! m16-F2 [Term] id: SOY:0000782 name: m16-F2.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000223 ! m16-F2 [Term] id: SOY:0000783 name: m16-F2.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000223 ! m16-F2 [Term] id: SOY:0000784 name: m16-F2.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000223 ! m16-F2 [Term] id: SOY:0000785 name: m16-F2.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000223 ! m16-F2 [Term] id: SOY:0000786 name: m16-F3.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000239 ! m16-F3 [Term] id: SOY:0000787 name: m16-F3.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000239 ! m16-F3 [Term] id: SOY:0000788 name: m16-F3.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000239 ! m16-F3 [Term] id: SOY:0000789 name: m16-F3.4 namespace: soybean_structure def: "Flower is open." [SoyGro:001] is_a: SOY:0000239 ! m16-F3 [Term] id: SOY:0000790 name: m16-F3.5 namespace: soybean_structure def: "Petals are senesecent." [SoyGro:001] is_a: SOY:0000239 ! m16-F3 [Term] id: SOY:0000791 name: m16-F3.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000239 ! m16-F3 [Term] id: SOY:0000792 name: m16-F3.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000239 ! m16-F3 [Term] id: SOY:0000793 name: m16-F3.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000239 ! m16-F3 [Term] id: SOY:0000794 name: m16-F3.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000239 ! m16-F3 [Term] id: SOY:0000795 name: m2-F1.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000192 ! m2-F1 [Term] id: SOY:0000796 name: m2-F1.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000192 ! m2-F1 [Term] id: SOY:0000797 name: m2-F1.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000192 ! m2-F1 [Term] id: SOY:0000798 name: m2-F1.4 namespace: soybean_structure def: "Flower is open." [SoyGro:001] is_a: SOY:0000192 ! m2-F1 [Term] id: SOY:0000799 name: m2-F1.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000192 ! m2-F1 [Term] id: SOY:0000800 name: m2-F1.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000192 ! m2-F1 [Term] id: SOY:0000801 name: m2-F1.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000192 ! m2-F1 [Term] id: SOY:0000802 name: m2-F1.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000192 ! m2-F1 [Term] id: SOY:0000803 name: m2-F1.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000192 ! m2-F1 [Term] id: SOY:0000804 name: m2-F2.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000209 ! m2-F2 [Term] id: SOY:0000805 name: m2-F2.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000209 ! m2-F2 [Term] id: SOY:0000806 name: m2-F2.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000209 ! m2-F2 [Term] id: SOY:0000807 name: m2-F2.4 namespace: soybean_structure def: "Flower is open." [SoyGro:001] is_a: SOY:0000209 ! m2-F2 [Term] id: SOY:0000808 name: m2-F2.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000209 ! m2-F2 [Term] id: SOY:0000809 name: m2-F2.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000209 ! m2-F2 [Term] id: SOY:0000810 name: m2-F2.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000209 ! m2-F2 [Term] id: SOY:0000811 name: m2-F2.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000209 ! m2-F2 [Term] id: SOY:0000812 name: m2-F2.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000209 ! m2-F2 [Term] id: SOY:0000813 name: m2-F3.1 namespace: soybean_structure def: "Flower bud is just visible." [SoyGro:001] is_a: SOY:0000225 ! m2-F3 [Term] id: SOY:0000814 name: m2-F3.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000225 ! m2-F3 [Term] id: SOY:0000815 name: m2-F3.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000225 ! m2-F3 [Term] id: SOY:0000816 name: m2-F3.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000225 ! m2-F3 [Term] id: SOY:0000817 name: m2-F3.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000225 ! m2-F3 [Term] id: SOY:0000818 name: m2-F3.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000225 ! m2-F3 [Term] id: SOY:0000819 name: m2-F3.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000225 ! m2-F3 [Term] id: SOY:0000820 name: m2-F3. namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000225 ! m2-F3 [Term] id: SOY:0000821 name: m2-F3.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000225 ! m2-F3 [Term] id: SOY:0000822 name: m2-F3.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000225 ! m2-F3 [Term] id: SOY:0000823 name: m3-F1.1 namespace: soybean_structure def: "Flower bud is just visible." [SoyGro:001] is_a: SOY:0000193 ! m3-F1 [Term] id: SOY:0000824 name: m3-F1.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000193 ! m3-F1 [Term] id: SOY:0000825 name: m3-F1.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000193 ! m3-F1 [Term] id: SOY:0000826 name: m3-F1.4 namespace: soybean_structure def: "Flower is open." [SoyGro:001] is_a: SOY:0000193 ! m3-F1 [Term] id: SOY:0000827 name: m3-F1.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000193 ! m3-F1 [Term] id: SOY:0000828 name: m3-F1.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000193 ! m3-F1 [Term] id: SOY:0000829 name: m3-F1.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000193 ! m3-F1 [Term] id: SOY:0000830 name: m3-F1.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000193 ! m3-F1 [Term] id: SOY:0000831 name: m3-F1.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000193 ! m3-F1 [Term] id: SOY:0000832 name: m3-F2.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000210 ! m3-F2 [Term] id: SOY:0000833 name: m3-F2.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000210 ! m3-F2 [Term] id: SOY:0000834 name: m3-F2.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000210 ! m3-F2 [Term] id: SOY:0000835 name: m3-F2.4 namespace: soybean_structure def: "Flower is open." [SoyGro:001] is_a: SOY:0000210 ! m3-F2 [Term] id: SOY:0000836 name: m3-F2.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000210 ! m3-F2 [Term] id: SOY:0000837 name: m3-F2.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000210 ! m3-F2 [Term] id: SOY:0000838 name: m3-F2.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000210 ! m3-F2 [Term] id: SOY:0000839 name: m3-F2.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000210 ! m3-F2 [Term] id: SOY:0000840 name: m3-F2.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000210 ! m3-F2 [Term] id: SOY:0000841 name: m3-F3.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000226 ! m3-F3 [Term] id: SOY:0000842 name: m3-F3.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000226 ! m3-F3 [Term] id: SOY:0000843 name: m3-F3.3 namespace: soybean_structure def: "Flower petals visible but flower is close." [SoyGro:001] is_a: SOY:0000226 ! m3-F3 [Term] id: SOY:0000844 name: m3-F3.4 namespace: soybean_structure def: "Flower is open." [SoyGro:001] is_a: SOY:0000226 ! m3-F3 [Term] id: SOY:0000845 name: m3-F3.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000226 ! m3-F3 [Term] id: SOY:0000846 name: m3-F3.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000226 ! m3-F3 [Term] id: SOY:0000847 name: m3-F3.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000226 ! m3-F3 [Term] id: SOY:0000848 name: m3-F3.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000226 ! m3-F3 [Term] id: SOY:0000849 name: m3-F3.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000226 ! m3-F3 [Term] id: SOY:0000850 name: m4-F1.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000194 ! m4-F1 [Term] id: SOY:0000851 name: m4-F1.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000194 ! m4-F1 [Term] id: SOY:0000852 name: m4-F1.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000194 ! m4-F1 [Term] id: SOY:0000853 name: m4-F1.4 namespace: soybean_structure def: "Flower is open." [SoyGro:001] is_a: SOY:0000194 ! m4-F1 [Term] id: SOY:0000854 name: m4-F1.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000194 ! m4-F1 [Term] id: SOY:0000855 name: m4-F1.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000194 ! m4-F1 [Term] id: SOY:0000856 name: m4-F1.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000194 ! m4-F1 [Term] id: SOY:0000857 name: m4-F1.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000194 ! m4-F1 [Term] id: SOY:0000858 name: m4-F1.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000194 ! m4-F1 [Term] id: SOY:0000859 name: m4-F2.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000211 ! m4-F2 [Term] id: SOY:0000860 name: m4-F2.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000211 ! m4-F2 [Term] id: SOY:0000861 name: m4-F2.3 namespace: soybean_structure def: "Flower petals visible but flower is close." [SoyGro:001] is_a: SOY:0000211 ! m4-F2 [Term] id: SOY:0000862 name: m4-F2.4 namespace: soybean_structure def: "Flower open." [SoyGro:001] is_a: SOY:0000211 ! m4-F2 [Term] id: SOY:0000863 name: m4-F2.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000211 ! m4-F2 [Term] id: SOY:0000864 name: m4-F2.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000211 ! m4-F2 [Term] id: SOY:0000865 name: m4-F2.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000211 ! m4-F2 [Term] id: SOY:0000866 name: m4-F2.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000211 ! m4-F2 [Term] id: SOY:0000867 name: m4-F2.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000211 ! m4-F2 [Term] id: SOY:0000868 name: m4-F3.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000227 ! m4-F3 [Term] id: SOY:0000869 name: m4-F3.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000227 ! m4-F3 [Term] id: SOY:0000870 name: m4-F3.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000227 ! m4-F3 [Term] id: SOY:0000871 name: m4-F3.4 namespace: soybean_structure def: "Flower is open." [SoyGro:001] is_a: SOY:0000227 ! m4-F3 [Term] id: SOY:0000872 name: m4-F3.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000227 ! m4-F3 [Term] id: SOY:0000873 name: m4-F3.6 namespace: soybean_structure def: "Pod just visible." [SoyGro:001] is_a: SOY:0000227 ! m4-F3 [Term] id: SOY:0000874 name: m4-F3.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000227 ! m4-F3 [Term] id: SOY:0000875 name: m4-F3.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000227 ! m4-F3 [Term] id: SOY:0000876 name: m4-F3.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000227 ! m4-F3 [Term] id: SOY:0000877 name: m5-F1.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:001] is_a: SOY:0000195 ! m5-F1 [Term] id: SOY:0000878 name: m5-F1.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:001] is_a: SOY:0000195 ! m5-F1 [Term] id: SOY:0000879 name: m5-F1.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:001] is_a: SOY:0000195 ! m5-F1 [Term] id: SOY:0000880 name: m5-F1.4 namespace: soybean_structure def: "Flower is open." [SoyGro:001] is_a: SOY:0000195 ! m5-F1 [Term] id: SOY:0000881 name: m5-F1.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:001] is_a: SOY:0000195 ! m5-F1 [Term] id: SOY:0000882 name: m5-F1.6 namespace: soybean_structure def: "Pod is just visible." [SoyGro:001] is_a: SOY:0000195 ! m5-F1 [Term] id: SOY:0000883 name: m5-F1.7 namespace: soybean_structure def: "Small size pod." [SoyGro:001] is_a: SOY:0000195 ! m5-F1 [Term] id: SOY:0000884 name: m5-F1.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:001] is_a: SOY:0000195 ! m5-F1 [Term] id: SOY:0000885 name: m5-F1.9 namespace: soybean_structure def: "Full size pod." [SoyGro:001] is_a: SOY:0000195 ! m5-F1 [Term] id: SOY:0000886 name: m1-4.1 namespace: soybean_structure def: "Leaf bud just visible." [SoyGro:rtn] is_a: SOY:0000159 ! m1-4 [Term] id: SOY:0000887 name: m1-4.2 namespace: soybean_structure def: "Leaf blades just visible." [SoyGro:rtn] is_a: SOY:0000159 ! m1-4 [Term] id: SOY:0000888 name: m1-4.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000159 ! m1-4 [Term] id: SOY:0000889 name: m1-4.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000159 ! m1-4 [Term] id: SOY:0000890 name: m1-4.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000159 ! m1-4 [Term] id: SOY:0000891 name: m1-4.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000159 ! m1-4 [Term] id: SOY:0000892 name: m1-4.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] is_a: SOY:0000159 ! m1-4 [Term] id: SOY:0000893 name: m1-4.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000159 ! m1-4 [Term] id: SOY:0000894 name: m1-4.9 namespace: soybean_structure def: "Leaflets senescent." [SoyGro:rtn] is_a: SOY:0000159 ! m1-4 [Term] id: SOY:0000895 name: m10-1.1 namespace: soybean_structure def: "Leaf bud just visible." [SoyGro:rtn] is_a: SOY:0000125 ! m10-1 [Term] id: SOY:0000896 name: m10-1.2 namespace: soybean_structure def: "Leaf blades just visible." [SoyGro:rtn] is_a: SOY:0000125 ! m10-1 [Term] id: SOY:0000897 name: m10-1.3 namespace: soybean_structure def: "Leaflets just visible." [SoyGro:rtn] is_a: SOY:0000125 ! m10-1 [Term] id: SOY:0000898 name: m10-1.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000125 ! m10-1 [Term] id: SOY:0000899 name: m10-1.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000125 ! m10-1 [Term] id: SOY:0000900 name: m10-1.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000125 ! m10-1 [Term] id: SOY:0000901 name: m10-1.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] is_a: SOY:0000125 ! m10-1 [Term] id: SOY:0000902 name: m10-1.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000125 ! m10-1 [Term] id: SOY:0000903 name: m10-1.9 namespace: soybean_structure def: "Leaflets senescent." [SoyGro:rtn] is_a: SOY:0000125 ! m10-1 [Term] id: SOY:0000904 name: m10-2.1 namespace: soybean_structure def: "Leaf bud just visible." [SoyGro:rtn] is_a: SOY:0000139 ! m10-2 [Term] id: SOY:0000905 name: m10-2.2 namespace: soybean_structure def: "Leaf blades just visible." [SoyGro:rtn] is_a: SOY:0000139 ! m10-2 [Term] id: SOY:0000906 name: m10-2.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000139 ! m10-2 [Term] id: SOY:0000907 name: m10-2.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000139 ! m10-2 [Term] id: SOY:0000908 name: m10-2.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000139 ! m10-2 [Term] id: SOY:0000909 name: m10-2.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000139 ! m10-2 [Term] id: SOY:0000910 name: m10-2.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] is_a: SOY:0000139 ! m10-2 [Term] id: SOY:0000911 name: m10-2.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000139 ! m10-2 [Term] id: SOY:0000912 name: m10-2.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000139 ! m10-2 [Term] id: SOY:0000913 name: m10-3.1 namespace: soybean_structure def: "Leaf bud just visible." [SoyGro:rtn] is_a: SOY:0000152 ! m10-3 [Term] id: SOY:0000914 name: m10-3.2 namespace: soybean_structure def: "Leaf blades just visible." [SoyGro:rtn] is_a: SOY:0000152 ! m10-3 [Term] id: SOY:0000915 name: m10-3.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000152 ! m10-3 [Term] id: SOY:0000916 name: m10-3.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000152 ! m10-3 [Term] id: SOY:0000917 name: m10-3.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000152 ! m10-3 [Term] id: SOY:0000918 name: m10-3.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000152 ! m10-3 [Term] id: SOY:0000919 name: m10-3.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] is_a: SOY:0000152 ! m10-3 [Term] id: SOY:0000920 name: m10-3.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000152 ! m10-3 [Term] id: SOY:0000921 name: m10-3.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000152 ! m10-3 [Term] id: SOY:0000922 name: m10-4.1 namespace: soybean_structure def: "Leaf bud just visible." [SoyGro:rtn] is_a: SOY:0000168 ! m10-4 [Term] id: SOY:0000923 name: m10-4.2 namespace: soybean_structure def: "Leaf blades just visible." [SoyGro:rtn] is_a: SOY:0000168 ! m10-4 [Term] id: SOY:0000924 name: m10-4.3 namespace: soybean_structure def: "Leaflets just visible." [SoyGro:rtn] is_a: SOY:0000168 ! m10-4 [Term] id: SOY:0000925 name: m10-4.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000168 ! m10-4 [Term] id: SOY:0000926 name: m10-4.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000168 ! m10-4 [Term] id: SOY:0000927 name: m10-4.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000168 ! m10-4 [Term] id: SOY:0000928 name: m10-4.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] is_a: SOY:0000168 ! m10-4 [Term] id: SOY:0000929 name: m10-4.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000168 ! m10-4 [Term] id: SOY:0000930 name: m10-4.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000168 ! m10-4 [Term] id: SOY:0000931 name: m11-1.1 namespace: soybean_structure def: "Leaf bud just visible." [SoyGro:rtn] is_a: SOY:0000126 ! m11-1 [Term] id: SOY:0000932 name: m11-1.2 namespace: soybean_structure def: "Leaf blades just visible." [SoyGro:rtn] is_a: SOY:0000126 ! m11-1 [Term] id: SOY:0000933 name: m11-1.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000126 ! m11-1 [Term] id: SOY:0000934 name: m11-1.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000126 ! m11-1 [Term] id: SOY:0000935 name: m11-1.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000126 ! m11-1 [Term] id: SOY:0000936 name: m11-1.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000126 ! m11-1 [Term] id: SOY:0000937 name: m11-1.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] is_a: SOY:0000126 ! m11-1 [Term] id: SOY:0000938 name: m11-1.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000126 ! m11-1 [Term] id: SOY:0000939 name: m11-1.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000126 ! m11-1 [Term] id: SOY:0000940 name: m11-2.1 namespace: soybean_structure def: "Leaf bud just visible." [SoyGro:rtn] is_a: SOY:0000140 ! m11-2 [Term] id: SOY:0000941 name: m11-2.2 namespace: soybean_structure def: "Leaf blades just visible." [SoyGro:rtn] is_a: SOY:0000140 ! m11-2 [Term] id: SOY:0000942 name: m11-2.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000140 ! m11-2 [Term] id: SOY:0000943 name: m11-2.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000140 ! m11-2 [Term] id: SOY:0000944 name: m11-2.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000140 ! m11-2 [Term] id: SOY:0000945 name: m11-2.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000140 ! m11-2 [Term] id: SOY:0000946 name: m11-2.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] is_a: SOY:0000140 ! m11-2 [Term] id: SOY:0000947 name: m11-2.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000140 ! m11-2 [Term] id: SOY:0000948 name: m11-2.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000140 ! m11-2 [Term] id: SOY:0000949 name: m11-3.1 namespace: soybean_structure def: "Leaf bud just visible." [SoyGro:rtn] is_a: SOY:0000153 ! m11-3 [Term] id: SOY:0000950 name: m11-3.2 namespace: soybean_structure def: "Leaflets just visible." [SoyGro:rtn] is_a: SOY:0000153 ! m11-3 [Term] id: SOY:0000951 name: m11-3.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000153 ! m11-3 [Term] id: SOY:0000952 name: m11-3.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000153 ! m11-3 [Term] id: SOY:0000953 name: m11-3.5 namespace: soybean_structure def: "Leaflets are partially open." [SoyGro:rtn] is_a: SOY:0000153 ! m11-3 [Term] id: SOY:0000954 name: m11-3.6 namespace: soybean_structure def: "Leaflets are half open." [SoyGro:rtn] is_a: SOY:0000153 ! m11-3 [Term] id: SOY:0000955 name: m11-3.7 namespace: soybean_structure def: "Leaflets are fully open." [SoyGro:rtn] is_a: SOY:0000153 ! m11-3 [Term] id: SOY:0000956 name: m11-3.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000153 ! m11-3 [Term] id: SOY:0000957 name: m11-3.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000153 ! m11-3 [Term] id: SOY:0000958 name: m11-4.1 namespace: soybean_structure def: "Leaf bud just visible." [SoyGro:rtn] is_a: SOY:0000169 ! m11-4 [Term] id: SOY:0000959 name: m11-4.2 namespace: soybean_structure def: "Leaf blades just visible." [SoyGro:rtn] is_a: SOY:0000169 ! m11-4 [Term] id: SOY:0000960 name: m11-4.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000169 ! m11-4 [Term] id: SOY:0000961 name: m11-4.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000169 ! m11-4 [Term] id: SOY:0000962 name: m11-4.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000169 ! m11-4 [Term] id: SOY:0000963 name: m11-4.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000169 ! m11-4 [Term] id: SOY:0000964 name: m11-4.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] is_a: SOY:0000169 ! m11-4 [Term] id: SOY:0000965 name: m11-4.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000169 ! m11-4 [Term] id: SOY:0000966 name: m11-4.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000169 ! m11-4 [Term] id: SOY:0000967 name: m12-1.1 namespace: soybean_structure def: "Leaf bud just visible." [SoyGro:rtn] is_a: SOY:0000127 ! m12-1 [Term] id: SOY:0000968 name: m12-1.2 namespace: soybean_structure def: "Leaflets just visible." [SoyGro:rtn] is_a: SOY:0000127 ! m12-1 [Term] id: SOY:0000969 name: m12-1.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000127 ! m12-1 [Term] id: SOY:0000970 name: m12-1.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000127 ! m12-1 [Term] id: SOY:0000971 name: m12-1.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000127 ! m12-1 [Term] id: SOY:0000972 name: m12-1.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000127 ! m12-1 [Term] id: SOY:0000973 name: m12-1.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] is_a: SOY:0000127 ! m12-1 [Term] id: SOY:0000974 name: m12-1.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000127 ! m12-1 [Term] id: SOY:0000975 name: m12-1.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000127 ! m12-1 [Term] id: SOY:0000976 name: m12-2.1 namespace: soybean_structure def: "Leaf bud just visible." [SoyGro:rtn] is_a: SOY:0000141 ! m12-2 [Term] id: SOY:0000977 name: m12-2.2 namespace: soybean_structure def: "Leaf blades just visible." [SoyGro:rtn] is_a: SOY:0000141 ! m12-2 [Term] id: SOY:0000978 name: m12-2.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000141 ! m12-2 [Term] id: SOY:0000979 name: m12-2.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000141 ! m12-2 [Term] id: SOY:0000980 name: m12-2.5 namespace: soybean_structure def: "Leaflets are partially open." [SoyGro:rtn] is_a: SOY:0000141 ! m12-2 [Term] id: SOY:0000981 name: m12-2.6 namespace: soybean_structure def: "Leaflets are half open." [SoyGro:rtn] is_a: SOY:0000141 ! m12-2 [Term] id: SOY:0000982 name: m12-2.7 namespace: soybean_structure def: "Leaflets are fully open." [SoyGro:rtn] is_a: SOY:0000141 ! m12-2 [Term] id: SOY:0000983 name: m12-2.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000141 ! m12-2 [Term] id: SOY:0000984 name: m12-2.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000141 ! m12-2 [Term] id: SOY:0000985 name: m12-3.1 namespace: soybean_structure def: "Leaf bud just visible." [SoyGro:rtn] is_a: SOY:0000154 ! m12-3 [Term] id: SOY:0000986 name: m12-3.2 namespace: soybean_structure def: "Leaf blades just visible." [SoyGro:rtn] is_a: SOY:0000154 ! m12-3 [Term] id: SOY:0000987 name: m12-3.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000154 ! m12-3 [Term] id: SOY:0000988 name: m12-3.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000154 ! m12-3 [Term] id: SOY:0000989 name: m12-3.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000154 ! m12-3 [Term] id: SOY:0000990 name: m12-3.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000154 ! m12-3 [Term] id: SOY:0000991 name: m12-3.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] is_a: SOY:0000154 ! m12-3 [Term] id: SOY:0000992 name: m12-3.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000154 ! m12-3 [Term] id: SOY:0000993 name: m12-3.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000154 ! m12-3 [Term] id: SOY:0000994 name: m12-4.1 namespace: soybean_structure def: "Leaf bud just visible." [SoyGro:rtn] is_a: SOY:0000170 ! m12-4 [Term] id: SOY:0000995 name: m12-4.2 namespace: soybean_structure def: "Leaf blades just visible." [SoyGro:rtn] is_a: SOY:0000170 ! m12-4 [Term] id: SOY:0000996 name: m12-4.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000170 ! m12-4 [Term] id: SOY:0000997 name: m12-4.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000170 ! m12-4 [Term] id: SOY:0000998 name: m12-4.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000170 ! m12-4 [Term] id: SOY:0000999 name: m12-4.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000170 ! m12-4 [Term] id: SOY:0001000 name: m12-4.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] is_a: SOY:0000170 ! m12-4 [Term] id: SOY:0001001 name: m12-4.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000170 ! m12-4 [Term] id: SOY:0001002 name: m12-4.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000170 ! m12-4 [Term] id: SOY:0001003 name: m13-1.1 namespace: soybean_structure def: "Leaf bud just visible." [SoyGro:rtn] is_a: SOY:0000128 ! m13-1 [Term] id: SOY:0001004 name: m13-1.2 namespace: soybean_structure def: "Leaf blades just visible." [SoyGro:rtn] is_a: SOY:0000128 ! m13-1 [Term] id: SOY:0001005 name: m13-1.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000128 ! m13-1 [Term] id: SOY:0001006 name: m13-1.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000128 ! m13-1 [Term] id: SOY:0001007 name: m13-1.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000128 ! m13-1 [Term] id: SOY:0001008 name: m13-1.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000128 ! m13-1 [Term] id: SOY:0001009 name: m13-1.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] is_a: SOY:0000128 ! m13-1 [Term] id: SOY:0001010 name: m13-1.8 namespace: soybean_structure def: "Leaflets mature size." [SoyGro:rtn] is_a: SOY:0000128 ! m13-1 [Term] id: SOY:0001011 name: m13-1.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000128 ! m13-1 [Term] id: SOY:0001012 name: m13-2.1 namespace: soybean_structure def: "Leaf bud just visible." [SoyGro:rtn] is_a: SOY:0000142 ! m13-2 [Term] id: SOY:0001013 name: m13-2.2 namespace: soybean_structure def: "Leaf blades just visible." [SoyGro:rtn] is_a: SOY:0000142 ! m13-2 [Term] id: SOY:0001014 name: m13-2.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000142 ! m13-2 [Term] id: SOY:0001015 name: m13-2.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000142 ! m13-2 [Term] id: SOY:0001016 name: m13-2.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000142 ! m13-2 [Term] id: SOY:0001017 name: m13-2.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000142 ! m13-2 [Term] id: SOY:0001018 name: m13-2.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] is_a: SOY:0000142 ! m13-2 [Term] id: SOY:0001019 name: m13-2.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000142 ! m13-2 [Term] id: SOY:0001020 name: m13-2.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000142 ! m13-2 [Term] id: SOY:0001021 name: m13-3.1 namespace: soybean_structure def: "Leaf bud just visible." [SoyGro:rtn] is_a: SOY:0000155 ! m13-3 [Term] id: SOY:0001022 name: m13-3.2 namespace: soybean_structure def: "Leaf blades just visible." [SoyGro:rtn] is_a: SOY:0000155 ! m13-3 [Term] id: SOY:0001023 name: m13-3.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000155 ! m13-3 [Term] id: SOY:0001024 name: m13-3.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000155 ! m13-3 [Term] id: SOY:0001025 name: m13-3.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000155 ! m13-3 [Term] id: SOY:0001026 name: m13-3.6 namespace: soybean_structure def: "Leaflets half open." [SoyGro:rtn] is_a: SOY:0000155 ! m13-3 [Term] id: SOY:0001027 name: m13-3.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] is_a: SOY:0000155 ! m13-3 [Term] id: SOY:0001028 name: m13-3.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000155 ! m13-3 [Term] id: SOY:0001029 name: m13-3.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000155 ! m13-3 [Term] id: SOY:0001030 name: m13-4.1 namespace: soybean_structure def: "Leaf bud just visible." [SoyGro:rtn] is_a: SOY:0000171 ! m13-4 [Term] id: SOY:0001031 name: m13-4.2 namespace: soybean_structure def: "Leaf blades just visible." [SoyGro:rtn] is_a: SOY:0000171 ! m13-4 [Term] id: SOY:0001032 name: m13-4.3 namespace: soybean_structure def: "Leaflets visible." [SoyGro:rtn] is_a: SOY:0000171 ! m13-4 [Term] id: SOY:0001033 name: m13-4.4 namespace: soybean_structure def: "Leaflets unfurled." [SoyGro:rtn] is_a: SOY:0000171 ! m13-4 [Term] id: SOY:0001034 name: m13-4.5 namespace: soybean_structure def: "Leaflets partially open." [SoyGro:rtn] is_a: SOY:0000171 ! m13-4 [Term] id: SOY:0001035 name: m13-4.6 namespace: soybean_structure def: "Leaflets are half open." [SoyGro:rtn] is_a: SOY:0000171 ! m13-4 [Term] id: SOY:0001036 name: m13-4.7 namespace: soybean_structure def: "Leaflets are fully open." [SoyGro:rtn] is_a: SOY:0000171 ! m13-4 [Term] id: SOY:0001037 name: m13-4.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000171 ! m13-4 [Term] id: SOY:0001038 name: m13-4.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000171 ! m13-4 [Term] id: SOY:0001039 name: m14-1.1 namespace: soybean_structure def: "Leaf bud just visible." [SoyGro:rtn] is_a: SOY:0000129 ! m14-1 [Term] id: SOY:0001040 name: m14-1.2 namespace: soybean_structure def: "Leaf blades just visible." [SoyGro:rtn] is_a: SOY:0000129 ! m14-1 [Term] id: SOY:0001041 name: m14-1.3 namespace: soybean_structure def: "Leaflets are visible." [SoyGro:rtn] is_a: SOY:0000129 ! m14-1 [Term] id: SOY:0001042 name: m14-1.4 namespace: soybean_structure def: "Leaflets are unfurled." [SoyGro:rtn] is_a: SOY:0000129 ! m14-1 [Term] id: SOY:0001043 name: m14-1.5 namespace: soybean_structure def: "Leaflets are partially open." [SoyGro:rtn] is_a: SOY:0000129 ! m14-1 [Term] id: SOY:0001044 name: m14-1.6 namespace: soybean_structure def: "Leaflets are half open." [SoyGro:rtn] is_a: SOY:0000129 ! m14-1 [Term] id: SOY:0001045 name: m14-1.7 namespace: soybean_structure def: "Leaflets are fully open." [SoyGro:rtn] is_a: SOY:0000129 ! m14-1 [Term] id: SOY:0001046 name: m14-1.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000129 ! m14-1 [Term] id: SOY:0001047 name: m14-1.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000129 ! m14-1 [Term] id: SOY:0001048 name: m14-2.1 namespace: soybean_structure def: "Leaf bud just visible." [SoyGro:rtn] is_a: SOY:0000143 ! m14-2 [Term] id: SOY:0001049 name: m14-2.2 namespace: soybean_structure def: "Leaf blades are just visible." [SoyGro:rtn] is_a: SOY:0000143 ! m14-2 [Term] id: SOY:0001050 name: m14-2.3 namespace: soybean_structure def: "Leaflets are visible." [SoyGro:rtn] is_a: SOY:0000143 ! m14-2 [Term] id: SOY:0001051 name: m14-2.4 namespace: soybean_structure def: "Leaflets are unfurled." [SoyGro:rtn] is_a: SOY:0000143 ! m14-2 [Term] id: SOY:0001052 name: m14-2.5 namespace: soybean_structure def: "Leaflets are partially open." [SoyGro:rtn] is_a: SOY:0000143 ! m14-2 [Term] id: SOY:0001053 name: m14-2.6 namespace: soybean_structure def: "Leaflets are partially open." [SoyGro:rtn] is_a: SOY:0000143 ! m14-2 [Term] id: SOY:0001054 name: m14-2.7 namespace: soybean_structure def: "Leaflets are fully open." [SoyGro:rtn] is_a: SOY:0000143 ! m14-2 [Term] id: SOY:0001055 name: m14-2.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000143 ! m14-2 [Term] id: SOY:0001056 name: m14-2.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000143 ! m14-2 [Term] id: SOY:0001057 name: m14-3.1 namespace: soybean_structure def: "Leaf bud is just visible." [SoyGro:rtn] is_a: SOY:0000156 ! m14-3 [Term] id: SOY:0001058 name: m14-3.2 namespace: soybean_structure def: "Leaf blades are just visible." [SoyGro:rtn] is_a: SOY:0000156 ! m14-3 [Term] id: SOY:0001059 name: m14-3.3 namespace: soybean_structure def: "Leaflets are just visible." [SoyGro:rtn] is_a: SOY:0000156 ! m14-3 [Term] id: SOY:0001060 name: m14-3.4 namespace: soybean_structure def: "Leaflets are unfurled." [SoyGro:rtn] is_a: SOY:0000156 ! m14-3 [Term] id: SOY:0001061 name: m14-3.5 namespace: soybean_structure def: "Leaflets are partially open." [SoyGro:rtn] is_a: SOY:0000156 ! m14-3 [Term] id: SOY:0001062 name: m14-3.6 namespace: soybean_structure def: "Leaflets are half open." [SoyGro:rtn] is_a: SOY:0000156 ! m14-3 [Term] id: SOY:0001063 name: m14-3.7 namespace: soybean_structure def: "Leaflets are fully open." [SoyGro:rtn] is_a: SOY:0000156 ! m14-3 [Term] id: SOY:0001064 name: m14-3.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000156 ! m14-3 [Term] id: SOY:0001065 name: m14-3.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000156 ! m14-3 [Term] id: SOY:0001066 name: m14-4.1 namespace: soybean_structure def: "Leaf bud just visible." [SoyGro:rtn] is_a: SOY:0000172 ! m14-4 [Term] id: SOY:0001067 name: m14-4.2 namespace: soybean_structure def: "Leaf blades just visible." [SoyGro:rtn] is_a: SOY:0000172 ! m14-4 [Term] id: SOY:0001068 name: m14-4.3 namespace: soybean_structure def: "Leaflets are just visible." [SoyGro:rtn] is_a: SOY:0000172 ! m14-4 [Term] id: SOY:0001069 name: m14-4.4 namespace: soybean_structure def: "Leaflets are unfurled." [SoyGro:rtn] is_a: SOY:0000172 ! m14-4 [Term] id: SOY:0001070 name: m14-4.5 namespace: soybean_structure def: "Leaflets are partially open." [SoyGro:rtn] is_a: SOY:0000172 ! m14-4 [Term] id: SOY:0001071 name: m14-4.6 namespace: soybean_structure def: "Leaflets are half open." [SoyGro:rtn] is_a: SOY:0000172 ! m14-4 [Term] id: SOY:0001072 name: m14-4.7 namespace: soybean_structure def: "Leaflets are fully open." [SoyGro:rtn] is_a: SOY:0000172 ! m14-4 [Term] id: SOY:0001073 name: m14-4.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000172 ! m14-4 [Term] id: SOY:0001074 name: m14-4.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000172 ! m14-4 [Term] id: SOY:0001075 name: m15-1.1 namespace: soybean_structure def: "Leaf bud just visible." [SoyGro:rtn] is_a: SOY:0000130 ! m15-1 [Term] id: SOY:0001076 name: m15-1.2 namespace: soybean_structure def: "Leaf blades just visible." [SoyGro:rtn] is_a: SOY:0000130 ! m15-1 [Term] id: SOY:0001077 name: m15-1.3 namespace: soybean_structure def: "Leaflets are just visible." [SoyGro:rtn] is_a: SOY:0000130 ! m15-1 [Term] id: SOY:0001078 name: m15-1.4 namespace: soybean_structure def: "Leaflets are unfurled." [SoyGro:rtn] is_a: SOY:0000130 ! m15-1 [Term] id: SOY:0001079 name: m15-1.5 namespace: soybean_structure def: "Leaflest are partially open." [SoyGro:rtn] is_a: SOY:0000130 ! m15-1 [Term] id: SOY:0001080 name: m15-1.6 namespace: soybean_structure def: "Leaflets are half open." [SoyGro:rtn] is_a: SOY:0000130 ! m15-1 [Term] id: SOY:0001081 name: m15-1.7 namespace: soybean_structure def: "Leaflets are fully open." [SoyGro:rtn] is_a: SOY:0000130 ! m15-1 [Term] id: SOY:0001082 name: m15-1.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000130 ! m15-1 [Term] id: SOY:0001083 name: m15-1.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000130 ! m15-1 [Term] id: SOY:0001084 name: m15-2.1 namespace: soybean_structure def: "Leaf bud just visibile." [SoyGro:rtn] is_a: SOY:0000144 ! m15-2 [Term] id: SOY:0001085 name: m15-2.2 namespace: soybean_structure def: "Leaf blades are just visible." [SoyGro:rtn] is_a: SOY:0000144 ! m15-2 [Term] id: SOY:0001086 name: m15-2.3 namespace: soybean_structure def: "Leaflets are just visible." [SoyGro:rtn] is_a: SOY:0000144 ! m15-2 [Term] id: SOY:0001087 name: m15-2.4 namespace: soybean_structure def: "Leaflets are unfurled." [SoyGro:rtn] is_a: SOY:0000144 ! m15-2 [Term] id: SOY:0001088 name: m15-2.5 namespace: soybean_structure def: "Leaflets are partially open." [SoyGro:rtn] is_a: SOY:0000144 ! m15-2 [Term] id: SOY:0001089 name: m15-2.6 namespace: soybean_structure def: "Leaflets are half open." [SoyGro:rtn] is_a: SOY:0000144 ! m15-2 [Term] id: SOY:0001090 name: m15-2.7 namespace: soybean_structure def: "Leaflets are fully open." [SoyGro:rtn] is_a: SOY:0000144 ! m15-2 [Term] id: SOY:0001091 name: m15-2.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000144 ! m15-2 [Term] id: SOY:0001092 name: m15-2.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000144 ! m15-2 [Term] id: SOY:0001093 name: m15-3.1 namespace: soybean_structure def: "Leaf bud is just visible." [SoyGro:rtn] is_a: SOY:0000157 ! m15-3 [Term] id: SOY:0001094 name: m15-3.2 namespace: soybean_structure def: "Leaf blades are just visible." [SoyGro:rtn] is_a: SOY:0000157 ! m15-3 [Term] id: SOY:0001095 name: m15-3.3 namespace: soybean_structure def: "Leaflets are just visible." [SoyGro:rtn] is_a: SOY:0000157 ! m15-3 [Term] id: SOY:0001096 name: m15-3.4 namespace: soybean_structure def: "Leaflets are unfurled." [SoyGro:rtn] is_a: SOY:0000157 ! m15-3 [Term] id: SOY:0001097 name: m15-3.5 namespace: soybean_structure def: "Leaflets are partially open." [SoyGro:rtn] is_a: SOY:0000157 ! m15-3 [Term] id: SOY:0001098 name: m15-3.6 namespace: soybean_structure def: "Leaflets are half open." [SoyGro:rtn] is_a: SOY:0000157 ! m15-3 [Term] id: SOY:0001099 name: m15-3.7 namespace: soybean_structure def: "Leaflets are fully open." [SoyGro:rtn] is_a: SOY:0000157 ! m15-3 [Term] id: SOY:0001100 name: m15-3.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000157 ! m15-3 [Term] id: SOY:0001101 name: m15-3.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000157 ! m15-3 [Term] id: SOY:0001102 name: m15-4.1 namespace: soybean_structure def: "Leaf bud is just visible." [SoyGro:rtn] is_a: SOY:0000173 ! m15-4 [Term] id: SOY:0001103 name: m15-4.2 namespace: soybean_structure def: "Leaflet blades are just visible." [SoyGro:rtn] is_a: SOY:0000173 ! m15-4 [Term] id: SOY:0001104 name: m15-4.3 namespace: soybean_structure def: "Leaflets are just visible." [SoyGro:rtn] is_a: SOY:0000173 ! m15-4 [Term] id: SOY:0001105 name: m15-4.4 namespace: soybean_structure def: "Leaflets are unfurled." [SoyGro:rtn] is_a: SOY:0000173 ! m15-4 [Term] id: SOY:0001106 name: m15-4.5 namespace: soybean_structure def: "Leaflets are partially open." [SoyGro:rtn] is_a: SOY:0000173 ! m15-4 [Term] id: SOY:0001107 name: m15-4.6 namespace: soybean_structure def: "Leaflets are half open." [SoyGro:rtn] is_a: SOY:0000173 ! m15-4 [Term] id: SOY:0001108 name: m15-4.7 namespace: soybean_structure def: "Leaflets are fully open." [SoyGro:rtn] is_a: SOY:0000173 ! m15-4 [Term] id: SOY:0001109 name: m15-4.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000173 ! m15-4 [Term] id: SOY:0001110 name: m15-4.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000173 ! m15-4 [Term] id: SOY:0001111 name: m16-1.1 namespace: soybean_structure def: "Leaf bud is just visible." [SoyGro:rtn] is_a: SOY:0000131 ! m16-1 [Term] id: SOY:0001112 name: m16-1.2 namespace: soybean_structure def: "Leaf blades are just visible." [SoyGro:rtn] is_a: SOY:0000131 ! m16-1 [Term] id: SOY:0001113 name: m16-1.3 namespace: soybean_structure def: "Leaflets are visible." [SoyGro:rtn] is_a: SOY:0000131 ! m16-1 [Term] id: SOY:0001114 name: m16-1.4 namespace: soybean_structure def: "Leaflets are unfurled." [SoyGro:rtn] is_a: SOY:0000131 ! m16-1 [Term] id: SOY:0001115 name: m16-1.5 namespace: soybean_structure def: "Leaflets are partially open." [SoyGro:rtn] is_a: SOY:0000131 ! m16-1 [Term] id: SOY:0001116 name: m16-1.6 namespace: soybean_structure def: "Leaflets are half open." [SoyGro:rtn] is_a: SOY:0000131 ! m16-1 [Term] id: SOY:0001117 name: m16-1.7 namespace: soybean_structure def: "Leaflets fully open." [SoyGro:rtn] is_a: SOY:0000131 ! m16-1 [Term] id: SOY:0001118 name: m16-1.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000131 ! m16-1 [Term] id: SOY:0001119 name: m16-1.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000131 ! m16-1 [Term] id: SOY:0001120 name: m16-2.1 namespace: soybean_structure def: "Leaf bud is just visible." [SoyGro:rtn] is_a: SOY:0000145 ! m16-2 [Term] id: SOY:0001121 name: m16-2.2 namespace: soybean_structure def: "Leaflet blades just visible." [SoyGro:rtn] is_a: SOY:0000145 ! m16-2 [Term] id: SOY:0001122 name: m16-2.3 namespace: soybean_structure def: "Leaflets are visible." [SoyGro:rtn] is_a: SOY:0000145 ! m16-2 [Term] id: SOY:0001123 name: m16-2.4 namespace: soybean_structure def: "Leaflets are unfurled." [SoyGro:rtn] is_a: SOY:0000145 ! m16-2 [Term] id: SOY:0001124 name: m16-2.5 namespace: soybean_structure def: "Leaflets are partially open." [SoyGro:rtn] is_a: SOY:0000145 ! m16-2 [Term] id: SOY:0001125 name: m16-2.6 namespace: soybean_structure def: "Leaflets are half open." [SoyGro:rtn] is_a: SOY:0000145 ! m16-2 [Term] id: SOY:0001126 name: m16-2.7 namespace: soybean_structure def: "Leaflets are fully open." [SoyGro:rtn] is_a: SOY:0000145 ! m16-2 [Term] id: SOY:0001127 name: m16-2.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000145 ! m16-2 [Term] id: SOY:0001128 name: m16-2.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000145 ! m16-2 [Term] id: SOY:0001129 name: m16-3.1 namespace: soybean_structure def: "Leaf bud is just visible." [SoyGro:rtn] is_a: SOY:0000158 ! m16-3 [Term] id: SOY:0001130 name: m16-3.2 namespace: soybean_structure def: "Leaflet blades are just visible." [SoyGro:rtn] is_a: SOY:0000158 ! m16-3 [Term] id: SOY:0001131 name: m16-3.3 namespace: soybean_structure def: "Leaflets are just visible." [SoyGro:rtn] is_a: SOY:0000158 ! m16-3 [Term] id: SOY:0001132 name: m16-3.4 namespace: soybean_structure def: "Leaflets are unfurled." [SoyGro:rtn] is_a: SOY:0000158 ! m16-3 [Term] id: SOY:0001133 name: m16-3.5 namespace: soybean_structure def: "Leaflets are partially open." [SoyGro:rtn] is_a: SOY:0000158 ! m16-3 [Term] id: SOY:0001134 name: m16-3.6 namespace: soybean_structure def: "Leaflets are half open." [SoyGro:rtn] is_a: SOY:0000158 ! m16-3 [Term] id: SOY:0001135 name: m16-3.7 namespace: soybean_structure def: "Leaflets are fully open." [SoyGro:rtn] is_a: SOY:0000158 ! m16-3 [Term] id: SOY:0001136 name: m16-3.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000158 ! m16-3 [Term] id: SOY:0001137 name: m16-3.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000158 ! m16-3 [Term] id: SOY:0001138 name: m16-4.1 namespace: soybean_structure def: "Leaf bud is just visible." [SoyGro:rtn] is_a: SOY:0000174 ! m16-4 [Term] id: SOY:0001139 name: m16-4.2 namespace: soybean_structure def: "Leaflet blades are just visible." [SoyGro:rtn] is_a: SOY:0000174 ! m16-4 [Term] id: SOY:0001140 name: m16-4.3 namespace: soybean_structure def: "Leaflets are visible." [SoyGro:rtn] is_a: SOY:0000174 ! m16-4 [Term] id: SOY:0001141 name: m16-4.4 namespace: soybean_structure def: "Leaflets are unfurled." [SoyGro:rtn] is_a: SOY:0000174 ! m16-4 [Term] id: SOY:0001142 name: m16-4.5 namespace: soybean_structure def: "Leaflets are partially open." [SoyGro:rtn] is_a: SOY:0000174 ! m16-4 [Term] id: SOY:0001143 name: m16-4.6 namespace: soybean_structure def: "Leaflets are half open." [SoyGro:rtn] is_a: SOY:0000174 ! m16-4 [Term] id: SOY:0001144 name: m16-4.7 namespace: soybean_structure def: "Leaflets are fully open." [SoyGro:rtn] is_a: SOY:0000174 ! m16-4 [Term] id: SOY:0001145 name: m16-4.8 namespace: soybean_structure def: "Leaflets are mature size." [SoyGro:rtn] is_a: SOY:0000174 ! m16-4 [Term] id: SOY:0001146 name: m16-4.9 namespace: soybean_structure def: "Leaflets are senescent." [SoyGro:rtn] is_a: SOY:0000174 ! m16-4 [Term] id: SOY:0001147 name: m5-F2.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:rtn] is_a: SOY:0000212 ! m5-F2 [Term] id: SOY:0001148 name: m5-F2.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:rtn] is_a: SOY:0000212 ! m5-F2 [Term] id: SOY:0001149 name: m5-F2.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:rtn] is_a: SOY:0000212 ! m5-F2 [Term] id: SOY:0001150 name: m5-F2.4 namespace: soybean_structure def: "Flower is open." [SoyGro:rtn] is_a: SOY:0000212 ! m5-F2 [Term] id: SOY:0001151 name: m5-F2.5 namespace: soybean_structure def: "Flower petals senescent." [SoyGro:rtn] is_a: SOY:0000212 ! m5-F2 [Term] id: SOY:0001152 name: m5-F2.6 namespace: soybean_structure def: "Pod is just visible." [SoyGro:rtn] is_a: SOY:0000212 ! m5-F2 [Term] id: SOY:0001153 name: m5-F2.7 namespace: soybean_structure def: "Small size pod." [SoyGro:rtn] is_a: SOY:0000212 ! m5-F2 [Term] id: SOY:0001154 name: m5-F2.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:rtn] is_a: SOY:0000212 ! m5-F2 [Term] id: SOY:0001155 name: m5-F2.9 namespace: soybean_structure def: "Full size pod." [SoyGro:rtn] is_a: SOY:0000212 ! m5-F2 [Term] id: SOY:0001156 name: m5-F3.1 namespace: soybean_structure def: "Flower bud is just visible." [SoyGro:rtn] is_a: SOY:0000228 ! m5-F3 [Term] id: SOY:0001157 name: m5-F3.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:rtn] is_a: SOY:0000228 ! m5-F3 [Term] id: SOY:0001158 name: m5-F3.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:rtn] is_a: SOY:0000228 ! m5-F3 [Term] id: SOY:0001159 name: m5-F3.4 namespace: soybean_structure def: "Flower is open." [SoyGro:rtn] is_a: SOY:0000228 ! m5-F3 [Term] id: SOY:0001160 name: m5-F3.5 namespace: soybean_structure def: "Petals are senescent." [SoyGro:rtn] is_a: SOY:0000228 ! m5-F3 [Term] id: SOY:0001161 name: m5-F3.6 namespace: soybean_structure def: "Pod is just visible." [SoyGro:rtn] is_a: SOY:0000228 ! m5-F3 [Term] id: SOY:0001162 name: m5-F3.7 namespace: soybean_structure def: "Small size pod." [SoyGro:rtn] is_a: SOY:0000228 ! m5-F3 [Term] id: SOY:0001163 name: m5-F3.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:rtn] is_a: SOY:0000228 ! m5-F3 [Term] id: SOY:0001164 name: m5-F3.9 namespace: soybean_structure def: "Full size pod." [SoyGro:rtn] is_a: SOY:0000228 ! m5-F3 [Term] id: SOY:0001165 name: m6-F1.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:rtn] is_a: SOY:0000196 ! m6-F1 [Term] id: SOY:0001166 name: m6-F1.2 namespace: soybean_structure def: "Flower petals are just visible." [SoyGro:rtn] is_a: SOY:0000196 ! m6-F1 [Term] id: SOY:0001167 name: m6-F1.3 namespace: soybean_structure def: "Flower petals are visible but flower is closed." [SoyGro:rtn] is_a: SOY:0000196 ! m6-F1 [Term] id: SOY:0001168 name: m6-F1.4 namespace: soybean_structure def: "Flower is open." [SoyGro:rtn] is_a: SOY:0000196 ! m6-F1 [Term] id: SOY:0001169 name: m6-F1.5 namespace: soybean_structure def: "Petals are senescent." [SoyGro:rtn] is_a: SOY:0000196 ! m6-F1 [Term] id: SOY:0001170 name: m6-F1.6 namespace: soybean_structure def: "Pod is just visible." [SoyGro:rtn] is_a: SOY:0000196 ! m6-F1 [Term] id: SOY:0001171 name: m6-F1.7 namespace: soybean_structure def: "Small size pod." [SoyGro:rtn] is_a: SOY:0000196 ! m6-F1 [Term] id: SOY:0001172 name: m6-F1.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:rtn] is_a: SOY:0000196 ! m6-F1 [Term] id: SOY:0001173 name: m6-F1.9 namespace: soybean_structure def: "Full size pod." [SoyGro:rtn] is_a: SOY:0000196 ! m6-F1 [Term] id: SOY:0001174 name: m6-F2.1 namespace: soybean_structure def: "Flower bud is just visible." [SoyGro:rtn] is_a: SOY:0000213 ! m6-F2 [Term] id: SOY:0001175 name: m6-F2.2 namespace: soybean_structure def: "Flower petals are just visible." [SoyGro:rtn] is_a: SOY:0000213 ! m6-F2 [Term] id: SOY:0001176 name: m6-F2.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:rtn] is_a: SOY:0000213 ! m6-F2 [Term] id: SOY:0001177 name: m6-F2.4 namespace: soybean_structure def: "Flower is open." [SoyGro:rtn] is_a: SOY:0000213 ! m6-F2 [Term] id: SOY:0001178 name: m6-F2.5 namespace: soybean_structure def: "Petals are senescent." [SoyGro:rtn] is_a: SOY:0000213 ! m6-F2 [Term] id: SOY:0001179 name: m6-F2.6 namespace: soybean_structure def: "Pod is just visible." [SoyGro:rtn] is_a: SOY:0000213 ! m6-F2 [Term] id: SOY:0001180 name: m6-F2.7 namespace: soybean_structure def: "Small size pod." [SoyGro:rtn] is_a: SOY:0000213 ! m6-F2 [Term] id: SOY:0001181 name: m6-F2.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:rtn] is_a: SOY:0000213 ! m6-F2 [Term] id: SOY:0001182 name: m6-F2.9 namespace: soybean_structure def: "Full size pod." [SoyGro:rtn] is_a: SOY:0000213 ! m6-F2 [Term] id: SOY:0001183 name: Root Structures namespace: soybean_structure def: "Structures associated with the root of a soybean plant." [SoyGro:rtn] is_a: SOY:0000098 ! Soybean Structure Terms created_by: rnelson creation_date: 2010-01-06T10:53:35Z [Term] id: SOY:0001184 name: m6-F3.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:rtn] is_a: SOY:0000229 ! m6-F3 [Term] id: SOY:0001185 name: m6-F3.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:rtn] is_a: SOY:0000229 ! m6-F3 [Term] id: SOY:0001186 name: m6-F3.4 namespace: soybean_structure def: "Flower is open." [SoyGro:rtn] is_a: SOY:0000229 ! m6-F3 [Term] id: SOY:0001187 name: m6-F3.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:rtn] is_a: SOY:0000229 ! m6-F3 [Term] id: SOY:0001188 name: m6-F3.6 namespace: soybean_structure def: "Pod is just visible." [SoyGro:rtn] is_a: SOY:0000229 ! m6-F3 [Term] id: SOY:0001189 name: m6-F3.7 namespace: soybean_structure def: "Small size pod." [SoyGro:rtn] is_a: SOY:0000229 ! m6-F3 [Term] id: SOY:0001190 name: m6-F3.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:rtn] is_a: SOY:0000229 ! m6-F3 [Term] id: SOY:0001191 name: m6-F3.9 namespace: soybean_structure def: "Full size pod." [SoyGro:rtn] is_a: SOY:0000229 ! m6-F3 [Term] id: SOY:0001192 name: m7-F1.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:rtn] is_a: SOY:0000197 ! m7-F1 [Term] id: SOY:0001193 name: m7-F1.2 namespace: soybean_structure def: "Flower petals are just visible." [SoyGro:rtn] is_a: SOY:0000197 ! m7-F1 [Term] id: SOY:0001194 name: m7-F1.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:rtn] is_a: SOY:0000197 ! m7-F1 [Term] id: SOY:0001195 name: m7-F1.4 namespace: soybean_structure def: "Flower is open." [SoyGro:rtn] is_a: SOY:0000197 ! m7-F1 [Term] id: SOY:0001196 name: m7-F1.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:rtn] is_a: SOY:0000197 ! m7-F1 [Term] id: SOY:0001197 name: m7-F1.6 namespace: soybean_structure def: "Pod is just visible." [SoyGro:rtn] is_a: SOY:0000197 ! m7-F1 [Term] id: SOY:0001198 name: m7-F1.7 namespace: soybean_structure def: "Small size pod." [SoyGro:rtn] is_a: SOY:0000197 ! m7-F1 [Term] id: SOY:0001199 name: m7-F1.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:rtn] is_a: SOY:0000197 ! m7-F1 [Term] id: SOY:0001200 name: m7-F1.9 namespace: soybean_structure def: "Full size pod." [SoyGro:rtn] is_a: SOY:0000197 ! m7-F1 [Term] id: SOY:0001201 name: m7-F2.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:rtn] is_a: SOY:0000214 ! m7-F2 [Term] id: SOY:0001202 name: m7-F2.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:rtn] is_a: SOY:0000214 ! m7-F2 [Term] id: SOY:0001203 name: m7-F2.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:rtn] is_a: SOY:0000214 ! m7-F2 [Term] id: SOY:0001204 name: m7-F2.4 namespace: soybean_structure def: "Flower is open." [SoyGro:rtn] is_a: SOY:0000214 ! m7-F2 [Term] id: SOY:0001205 name: m7-F2.5 namespace: soybean_structure def: "Petals are senescent." [SoyGro:rtn] is_a: SOY:0000214 ! m7-F2 [Term] id: SOY:0001206 name: m7-F2.6 namespace: soybean_structure def: "Pod is just visible." [SoyGro:rtn] is_a: SOY:0000214 ! m7-F2 [Term] id: SOY:0001207 name: m7-F2.7 namespace: soybean_structure def: "Small size pod." [SoyGro:rtn] is_a: SOY:0000214 ! m7-F2 [Term] id: SOY:0001208 name: m7-F2.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:rtn] is_a: SOY:0000214 ! m7-F2 [Term] id: SOY:0001209 name: m7-F2.9 namespace: soybean_structure def: "Full size pod." [SoyGro:rtn] is_a: SOY:0000214 ! m7-F2 [Term] id: SOY:0001210 name: m7-F3.1 namespace: soybean_structure def: "Flower bud is just visible." [SoyGro:rtn] is_a: SOY:0000230 ! m7-F3 [Term] id: SOY:0001211 name: m7-F3.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:rtn] is_a: SOY:0000230 ! m7-F3 [Term] id: SOY:0001212 name: m7-F3.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:rtn] is_a: SOY:0000230 ! m7-F3 [Term] id: SOY:0001213 name: m7-F3.4 namespace: soybean_structure def: "Flower is open." [SoyGro:rtn] is_a: SOY:0000230 ! m7-F3 [Term] id: SOY:0001214 name: m7-F3.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:rtn] is_a: SOY:0000230 ! m7-F3 [Term] id: SOY:0001215 name: m7-F3.6 namespace: soybean_structure def: "Pod is just visible." [SoyGro:rtn] is_a: SOY:0000230 ! m7-F3 [Term] id: SOY:0001216 name: m7-F3.7 namespace: soybean_structure def: "Small size pod." [SoyGro:rtn] is_a: SOY:0000230 ! m7-F3 [Term] id: SOY:0001217 name: m7-F3.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:rtn] is_a: SOY:0000230 ! m7-F3 [Term] id: SOY:0001218 name: m7-F3.9 namespace: soybean_structure def: "Full size pod." [SoyGro:rtn] is_a: SOY:0000230 ! m7-F3 [Term] id: SOY:0001219 name: m8-F1.1 namespace: soybean_structure def: "Flower bud just visible." [SoyGro:rtn] is_a: SOY:0000198 ! m8-F1 [Term] id: SOY:0001220 name: m8-F1.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:rtn] is_a: SOY:0000198 ! m8-F1 [Term] id: SOY:0001221 name: m8-F1.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:rtn] is_a: SOY:0000198 ! m8-F1 [Term] id: SOY:0001222 name: m8-F1.4 namespace: soybean_structure def: "Flower is open." [SoyGro:rtn] is_a: SOY:0000198 ! m8-F1 [Term] id: SOY:0001223 name: m8-F1.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:rtn] is_a: SOY:0000198 ! m8-F1 [Term] id: SOY:0001224 name: m8-F1.6 namespace: soybean_structure def: "Pod is just visible." [SoyGro:rtn] is_a: SOY:0000198 ! m8-F1 [Term] id: SOY:0001225 name: m8-F1.7 namespace: soybean_structure def: "Small size pod." [SoyGro:rtn] is_a: SOY:0000198 ! m8-F1 [Term] id: SOY:0001226 name: m8-F1.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:rtn] is_a: SOY:0000198 ! m8-F1 [Term] id: SOY:0001227 name: m8-F1.9 namespace: soybean_structure def: "Full size pod." [SoyGro:rtn] is_a: SOY:0000198 ! m8-F1 [Term] id: SOY:0001228 name: m8-F2.1 namespace: soybean_structure def: "Flower bud is just visible." [SoyGro:rtn] is_a: SOY:0000215 ! m8-F2 [Term] id: SOY:0001229 name: m8-F2.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:rtn] is_a: SOY:0000215 ! m8-F2 [Term] id: SOY:0001230 name: m8-F2.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:rtn] is_a: SOY:0000215 ! m8-F2 [Term] id: SOY:0001231 name: m8-F2.4 namespace: soybean_structure def: "Flower is open." [SoyGro:rtn] is_a: SOY:0000215 ! m8-F2 [Term] id: SOY:0001232 name: m8-F2.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:rtn] is_a: SOY:0000215 ! m8-F2 [Term] id: SOY:0001233 name: m8-F2.6 namespace: soybean_structure def: "Pod is just visible." [SoyGro:rtn] is_a: SOY:0000215 ! m8-F2 [Term] id: SOY:0001234 name: m8-F2.7 namespace: soybean_structure def: "Small size pod." [SoyGro:rtn] is_a: SOY:0000215 ! m8-F2 [Term] id: SOY:0001235 name: m8-F2.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:rtn] is_a: SOY:0000215 ! m8-F2 [Term] id: SOY:0001236 name: m8-F2.9 namespace: soybean_structure def: "Full size pod." [SoyGro:rtn] is_a: SOY:0000215 ! m8-F2 [Term] id: SOY:0001237 name: m8-F3.1 namespace: soybean_structure def: "Flower bud is just visible." [SoyGro:rtn] is_a: SOY:0000231 ! m8-F3 [Term] id: SOY:0001238 name: m8-F3.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:rtn] is_a: SOY:0000231 ! m8-F3 [Term] id: SOY:0001239 name: m8-F3.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:rtn] is_a: SOY:0000231 ! m8-F3 [Term] id: SOY:0001240 name: m8-F3.4 namespace: soybean_structure def: "Flower is open." [SoyGro:rtn] is_a: SOY:0000231 ! m8-F3 [Term] id: SOY:0001241 name: m8-F3.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:rtn] is_a: SOY:0000231 ! m8-F3 [Term] id: SOY:0001242 name: m8-F3.6 namespace: soybean_structure def: "Pod is just visible." [SoyGro:rtn] is_a: SOY:0000231 ! m8-F3 [Term] id: SOY:0001243 name: m8-F3.7 namespace: soybean_structure def: "Small size pod." [SoyGro:rtn] is_a: SOY:0000231 ! m8-F3 [Term] id: SOY:0001244 name: m8-F3.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:rtn] is_a: SOY:0000231 ! m8-F3 [Term] id: SOY:0001245 name: m8-F3.9 namespace: soybean_structure def: "Full size pod." [SoyGro:rtn] is_a: SOY:0000231 ! m8-F3 [Term] id: SOY:0001246 name: m9-F1.1 namespace: soybean_structure def: "Flower bud is just visible." [SoyGro:rtn] is_a: SOY:0000199 ! m9-F1 [Term] id: SOY:0001247 name: m9-F1.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:rtn] is_a: SOY:0000199 ! m9-F1 [Term] id: SOY:0001248 name: m9-F1.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:rtn] is_a: SOY:0000199 ! m9-F1 [Term] id: SOY:0001249 name: m9-F1.4 namespace: soybean_structure def: "Flower is open." [SoyGro:rtn] is_a: SOY:0000199 ! m9-F1 [Term] id: SOY:0001250 name: m9-F1.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:rtn] is_a: SOY:0000199 ! m9-F1 [Term] id: SOY:0001251 name: m9-F1.6 namespace: soybean_structure def: "Pod is just visible." [SoyGro:rtn] is_a: SOY:0000199 ! m9-F1 [Term] id: SOY:0001252 name: m9-F1.7 namespace: soybean_structure def: "Small size pod." [SoyGro:rtn] is_a: SOY:0000199 ! m9-F1 [Term] id: SOY:0001253 name: m9-F1.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:rtn] is_a: SOY:0000199 ! m9-F1 [Term] id: SOY:0001254 name: m9-F1.9 namespace: soybean_structure def: "Full size pod." [SoyGro:rtn] is_a: SOY:0000199 ! m9-F1 [Term] id: SOY:0001255 name: m9-F2.1 namespace: soybean_structure def: "Flower bud is just visible." [SoyGro:rtn] is_a: SOY:0000216 ! m9-F2 [Term] id: SOY:0001256 name: m9-F2.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:rtn] is_a: SOY:0000216 ! m9-F2 [Term] id: SOY:0001257 name: m9-F2.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:rtn] is_a: SOY:0000216 ! m9-F2 [Term] id: SOY:0001258 name: m9-F2.4 namespace: soybean_structure def: "Flower is open." [SoyGro:rtn] is_a: SOY:0000216 ! m9-F2 [Term] id: SOY:0001259 name: m9-F2.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:rtn] is_a: SOY:0000216 ! m9-F2 [Term] id: SOY:0001260 name: m9-F2.6 namespace: soybean_structure def: "Pod is just visible." [SoyGro:rtn] is_a: SOY:0000216 ! m9-F2 [Term] id: SOY:0001261 name: m9-F2.7 namespace: soybean_structure def: "Small size pod." [SoyGro:rtn] is_a: SOY:0000216 ! m9-F2 [Term] id: SOY:0001262 name: m9-F2.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:rtn] is_a: SOY:0000216 ! m9-F2 [Term] id: SOY:0001263 name: m9-F2.9 namespace: soybean_structure def: "Full size pod." [SoyGro:rtn] is_a: SOY:0000216 ! m9-F2 [Term] id: SOY:0001264 name: m9-F3.1 namespace: soybean_structure def: "Flower bud is just visible." [SoyGro:rtn] is_a: SOY:0000232 ! m9-F3 [Term] id: SOY:0001265 name: m9-F3.2 namespace: soybean_structure def: "Flower petals just visible." [SoyGro:rtn] is_a: SOY:0000232 ! m9-F3 [Term] id: SOY:0001266 name: m9-F3.3 namespace: soybean_structure def: "Flower petals visible but flower is closed." [SoyGro:rtn] is_a: SOY:0000232 ! m9-F3 [Term] id: SOY:0001267 name: m9-F3.4 namespace: soybean_structure def: "Flower is open." [SoyGro:rtn] is_a: SOY:0000232 ! m9-F3 [Term] id: SOY:0001268 name: m9-F3.5 namespace: soybean_structure def: "Petals senescent." [SoyGro:rtn] is_a: SOY:0000232 ! m9-F3 [Term] id: SOY:0001269 name: m9-F3.6 namespace: soybean_structure def: "Pod is just visible." [SoyGro:rtn] is_a: SOY:0000232 ! m9-F3 [Term] id: SOY:0001270 name: m9-F3.7 namespace: soybean_structure def: "Small size pod." [SoyGro:rtn] is_a: SOY:0000232 ! m9-F3 [Term] id: SOY:0001271 name: m9-F3.8 namespace: soybean_structure def: "Medium size pod." [SoyGro:rtn] is_a: SOY:0000232 ! m9-F3 [Term] id: SOY:0001272 name: m9-F3.9 namespace: soybean_structure def: "Full size pod." [SoyGro:rtn] is_a: SOY:0000232 ! m9-F3 [Term] id: SOY:0001273 name: Flower Developmental Stages namespace: soybean_development def: "Developmental stages of the floral organ." [SoyGro:rtn] synonym: "PO:0007615 flower development stages" RELATED [PO:0007615] is_a: SOY:0001650 ! Soybean Development Stages [Term] id: SOY:0001274 name: F0.1 Flower Bud Just Visible namespace: soybean_development def: "The flower bud is just visible on the inflorescence." [SoyGro:rtn] xref: PO:PO\:0001380 "sepals enclosing flower bud stage" is_a: SOY:0001273 ! Flower Developmental Stages [Term] id: SOY:0001275 name: F0.2 Flower Petals Just Visible namespace: soybean_development def: "The calyx is open and the petals are just visible." [SoyGro:rtn] xref: PO:PO\:0007611 "petal differentiation and expansion stage" is_a: SOY:0001273 ! Flower Developmental Stages [Term] id: SOY:0001276 name: F0.3 Closed Flower namespace: soybean_development def: "Flower petals are visible but the flower is closed." [SoyGro:rtn] is_a: SOY:0001273 ! Flower Developmental Stages [Term] id: SOY:0001277 name: F0.4 Open Flower namespace: soybean_development def: "Flower is open and petals are visible." [SoyGro:rtn] is_a: SOY:0001273 ! Flower Developmental Stages [Term] id: SOY:0001278 name: F0.5 Flower Petals Senescent namespace: soybean_development def: "Flower petals have darkened and are senescing." [SoyGro:rtn] is_a: SOY:0001273 ! Flower Developmental Stages [Term] id: SOY:0001279 name: F0.6 Pod Just Visible namespace: soybean_development def: "Developing pod just visible in calyx." [SoyGro:rtn] xref: PO:PO\:0025501 "fruit formation stage" is_a: SOY:0001273 ! Flower Developmental Stages [Term] id: SOY:0001280 name: F0.7 Small Size Pod namespace: soybean_development def: "Pod is small in size compared to mature size." [SoyGro:rtn] xref: PO:PO\:0025505 "fruit size 10 to 30% stage" is_a: SOY:0001273 ! Flower Developmental Stages [Term] id: SOY:0001281 name: F0.8 Pod Medium Size namespace: soybean_development def: "Pod has reached a medium size compared to mature size." [SoyGro:rtn] xref: PO:PO\:0025507 "fruit size 50 to 70% stage" is_a: SOY:0001273 ! Flower Developmental Stages [Term] id: SOY:0001282 name: F0.9 Full Size Pod namespace: soybean_development def: "Pod has reached its mature size." [SoyGro:rtn] xref: PO:PO\:0025508 "fruit size 70% to final size stage" is_a: SOY:0001273 ! Flower Developmental Stages [Term] id: SOY:0001283 name: Seed Developmental Stages namespace: soybean_development def: "Stages of the development of soybean seeds and embryo." [SoyGro:rtn] xref: GO:GO\:0048316 "seed development" is_a: SOY:0001650 ! Soybean Development Stages [Term] id: SOY:0001284 name: S1.00 Resting Zygote namespace: soybean_development def: "Zero days post flowering, zygote has formed and the primary endosperm is multinucleated." [SoyGRO:002] xref: PO:PO\:0025377 "plant embryo dormant stage" is_a: SOY:0001283 ! Seed Developmental Stages [Term] id: SOY:0001285 name: S1.01 Pro-embryo Stage 1 namespace: soybean_development def: "One day post flowering, embryo has undergone a cell division. Endosperm has formed a number of nuclei." [SoyGRO:002] synonym: "PO:0001180 B proembryo stage" RELATED [] xref: PO:PO\:0001180 "B proembryo stage" xref: PO:PO\:0007631 "plant embryo stage" is_a: SOY:0001283 ! Seed Developmental Stages [Term] id: SOY:0001286 name: S1.02 Pro-embryo Stage 2 namespace: soybean_development def: "Two days post flowering, embryo has reached 4 to 8 cells." [SoyGRO:002] synonym: "PO:0001180 B proembryo stage" RELATED [] xref: PO:PO\:0001180 "B proembryo stage" xref: PO:PO\:0007631 "plant embryo stage" is_a: SOY:0001283 ! Seed Developmental Stages [Term] id: SOY:0001287 name: S1.03 Pro-embryo Stage 3 namespace: soybean_development def: "Three days post flowering, pro-embryo is fully differentiated from suspensor. Endosperm has formed a peripheral layer and has a central vacuole." [SoyGRO:002] synonym: "PO:0001180 B proembryo stage" RELATED [] xref: PO:PO\:0001180 "B proembryo stage" xref: PO:PO\:0007631 "plant embryo stage" is_a: SOY:0001283 ! Seed Developmental Stages [Term] id: SOY:0001288 name: S1.04 Spherical Embryo Stage namespace: soybean_development def: "Four to five days post flowering, the embryo is spherical with a protoderm and developed suspensor. Endosperm surrounds the embryo and is cellular proximal to the embryo but is acellular distal to the embryo." [SoyGRO:002] synonym: "Globular stage" NARROW [] synonym: "PO:0001185 C globular stage" NARROW [] xref: PO:PO\:0001185 "C globular stage" xref: PO:PO\:0007631 "plant embryo stage" is_a: SOY:0001283 ! Seed Developmental Stages [Term] id: SOY:0001289 name: S1.05 Heart Stage namespace: soybean_development def: "Cotyledons begin development and are just visible six to 7 days post flowering." [SoyGRO:002] synonym: "PO:0004507 D bilateral stage" NARROW [] xref: PO:PO\:0004507 "D bilateral stage" xref: PO:PO\:0007631 "plant embryo stage" is_a: SOY:0001283 ! Seed Developmental Stages [Term] id: SOY:0001290 name: S1.06 Cotyledon Stage namespace: soybean_development def: "Ten to 14 days post flowering, cotyledons are in their normal position. Primary leaf primordia is visible and the endosperm occupies approximately 1/2 of the seed volume." [SoyGRO:002] synonym: "PO:0001078 E expanded cotyledon stage" BROAD [] xref: PO:PO\:0001078 "E expanded cotyledon stage" xref: PO:PO\:0007631 "plant embryo stage" is_a: SOY:0001283 ! Seed Developmental Stages [Term] id: SOY:0001291 name: S1.07 Early Maturity Stage 1 namespace: soybean_development def: "Cotyledons have reached final size and the primordia of the 1st trifoliolate has formed 20 to 30 days post flowering. Endosperm is almost completely assimilated." [SoyGRO:002] synonym: "PO:0001081 F mature embryo stage" NARROW [] xref: PO:PO\:0001081 "F mature embryo stage" is_a: SOY:0001283 ! Seed Developmental Stages [Term] id: SOY:0001292 name: S1.08 Early Maturity Stage 2 namespace: soybean_development def: "Thirty to 50 days post flowering endosperm is absent and the seed size is increasing." [SoyGRO:002] synonym: "PO:0001095 true leaf formation" RELATED [] xref: PO:PO\:0001081 "F mature embryo stage" is_a: SOY:0001283 ! Seed Developmental Stages [Term] id: SOY:0001293 name: S1.09 Mid Seed Maturity namespace: soybean_development def: "Fifty to 80 days post flowering, seed weight and size has increased to about half mature size and weight." [SoyGro:rtn] synonym: "PO:0007632 seed maturation stage" NARROW [] xref: GO:GO\:0010431 "seed maturation" xref: PO:PO\:0001081 "F mature embryo stage" is_a: SOY:0001283 ! Seed Developmental Stages [Term] id: SOY:0001294 name: S1.10 Late Seed Maturity namespace: soybean_development def: "Eighty to 110 days post flowering, seed has obtained mature size. Seed weight begins to drop due to dessication." [SoyGro:rtn] synonym: "PO:0007632 seed maturation stage" NARROW [] xref: GO:GO\:1990068 "seed dehydration" xref: PO:PO\:0001081 "F mature embryo stage" is_a: SOY:0001283 ! Seed Developmental Stages [Term] id: SOY:0001295 name: Taproot namespace: soybean_structure def: "Main root of the plant axis." [SOY:001] is_a: SOY:0001183 ! Root Structures created_by: rnelson creation_date: 2010-01-06T10:54:45Z [Term] id: SOY:0001296 name: Secondary Root namespace: soybean_structure def: "Root that originates from the taproot." [SoyGro:rtn] is_a: SOY:0001183 ! Root Structures created_by: rnelson creation_date: 2010-01-06T10:55:28Z [Term] id: SOY:0001297 name: Tertiary Root namespace: soybean_structure def: "Root that initiates from a secondary root." [SoyGro:rtn] is_a: SOY:0001183 ! Root Structures created_by: rnelson creation_date: 2010-01-06T10:56:43Z [Term] id: SOY:0001298 name: Quarternary Root namespace: soybean_structure def: "Root that originates from a tertiary root." [SoyGRO:002, SoyGro:rtn] is_a: SOY:0001183 ! Root Structures created_by: rnelson creation_date: 2010-01-06T10:58:02Z [Term] id: SOY:0001299 name: Root Nodule namespace: soybean_structure def: "Nodule formed from the tissues of the root system." [SoyGro:rtn] is_a: SOY:0001183 ! Root Structures created_by: rnelson creation_date: 2010-01-06T10:59:16Z [Term] id: SOY:0001300 name: Root Hair namespace: soybean_structure def: "Elongated absorptive cells formed from root epidermal cells." [SoyGRO:002, SoyGro:rtn] is_a: SOY:0001183 ! Root Structures created_by: rnelson creation_date: 2010-01-06T11:01:23Z [Term] id: SOY:0001301 name: Bacterial Root Nodule namespace: soybean_structure def: "Spherical structures formed by swelling of the root cortex. Swelling is caused by colonization of a root hair by members of the bacterial genus Rhizobium." [SoyGRO:002, SoyGro:rtn] is_a: SOY:0001299 ! Root Nodule created_by: rnelson creation_date: 2010-01-06T11:05:38Z [Term] id: SOY:0001302 name: Shattering namespace: soybean_trait def: "The propensity of a soybean pod to shatter during drying." [SoyTO:rtn] comment: Pod shattering during drying reduces recovery and thus yield. Pod dehis (QTL symbol). Has been measured using a 10 point scale, 0 <= 1%, 1 = 1-10%, 2 = 11-20%, 3 = 21-30%, 4 = 31-40%, 5 = 41=50%, 6 = 51-60%, 7 = 61-70%, 8 = 71-80%, 9 = 81-90%, 10 = 91-100% shattered. Also called pod dehiscence. synonym: "grain shattering" RELATED [] synonym: "Pod Dehiscence" EXACT [] synonym: "Shattering" EXACT [] xref: TO:TO\:0000473 "grain shattering" is_a: SOY:0001407 ! Soybean Yield Traits created_by: rnelson creation_date: 2010-05-21T03:15:13Z [Term] id: SOY:0001303 name: Reaction to Xanthomonas campestris pv phaseoli infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Xanthomonas campestris pv phaseoli." [SoyTO:004, SoyTO:005] comment: Symptoms include interveinal and marginal small watery lesions with a light-green boarder. Lesions enlarge and become necrotic at the center. Also causes common blight on common bean (Phaesolus vulgaris), scarlet runner bean (Phaseolus coccineus), tepary bean (Phaseolus acutifolius), and vigna species. Severity based on natural infestations in the field, 1= Resistant with no lesions, 2=Few lesions, 3=Moderate lesions, 4=Numerous lesions, 5=Complete coverage with lesions. synonym: "bacterial pustule" NARROW [] synonym: "Common bacterial blight" RELATED [] xref: TO:TO\:0000315 "bacterial disease resistance" is_a: SOY:0001686 ! Reaction to Xanthomonas campestris infection [Term] id: SOY:0001304 name: Abnormal seedling namespace: soybean_trait def: "Number of decayed seeds and seedlings, plus number of stunted seedlings (less than 2-cm growth)." [SoyTO:001] comment: QTL symbol is "Abn sdlg". xref: PO:PO\:0007131 "seedling development stage" is_a: SOY:0001408 ! Soybean Growth and Development Traits [Term] id: SOY:0001305 name: Adventitious roots namespace: soybean_trait def: "Indication of the amount of adventitious roots present. Adventitious root defined as post-embryonic root developed from shoot tissue." [SoyTO:001] comment: Adventitious roots can be induced by flooding. xref: PO:PO\:0000042 "shoot-borne root" xref: TO:TO\:0000043 "root anatomy and morphology trait" is_a: SOY:0001984 ! Root growth and development traits [Term] id: SOY:0001306 name: Adventitious Shoots namespace: soybean_trait def: "Regeneration of shoots from hypocotyls, cotyledonary nodes, or other abnormal location." [SOY:001] comment: Can be induced on cotyledons by indole-butyric acid and thidiazuron treatment. xref: GO:GO\:2000032 "regulation of secondary shoot formation" xref: PO:PO\:0025029 "shoot axis" xref: TO:TO\:0000654 "shoot development trait" is_a: SOY:0001733 ! Shoot Morphology [Term] id: SOY:0001307 name: Reaction to Alfalfa Mosaic Virus Infection (AMV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Alfalfa mosaic Virus." [SoyTO:004] comment: Infects a wide variety of beans and peas as well as other plants. synonym: "Alfalfa mosaic" EXACT [] synonym: "Alfalfa Mosaic Alfamovirus" EXACT [] synonym: "Alfalfa mosaic virus" RELATED [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001308 name: Reaction to Alternaria alternata infection namespace: soybean_trait def: "Reaction of the plant or plant part to Alternaria alternata infection." [SoyTO:004] comment: Symptoms include brown necrotic leaf spots with concentric rings. Mature spots converge producing large necrotic centers. Cause dark irregular sunken or darkend areas on the seed coats of infected seeds. Infection is associated with mechanical or insect damage. Organism has a wide host range including many bean varieties. synonym: "Alternaria leaf spot" NARROW [] synonym: "Alternaria pod decay" RELATED [] synonym: "Alternaria pod spot" RELATED [] synonym: "Alternaria seed decay" RELATED [] synonym: "pod spot" BROAD [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001570 ! Reaction to Alternaria infection [Term] id: SOY:0001309 name: Aluminum Tolerance namespace: soybean_trait def: "Ability of seedlings to growth in presence of aluminum. Determined by measuring elongation of the primary root and the two longest lateral roots. Tolerance expressed as a percent of controls in solution without Al." [SoyTO:001] comment: QTL symbol "AL tol". xref: TO:TO\:0000354 "aluminum sensitivity" is_a: SOY:0001812 ! Inorganic salt sensitivity [Term] id: SOY:0001310 name: Antibiosis namespace: soybean_trait def: "Resistance in which an insect's normal relationship with a host plant causes physiological or developmental detriment to the insect." [SoyTO:001] xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0000281 "metabolite content related trait" is_a: SOY:0001410 ! Soybean Biochemical Traits [Term] id: SOY:0001311 name: Antixenosis namespace: soybean_trait def: "Resistance in which an insect is either repelled from or not attracted to its normal host plant." [SoyTO:001] xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0000281 "metabolite content related trait" is_a: SOY:0001410 ! Soybean Biochemical Traits [Term] id: SOY:0001312 name: Reaction to Pseudomonas syringae infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Pseudomonas syringae." [SoyTO:002, SoyTO:003] comment: Symptoms include, distortion or crackling of leaflets with vein and interveinal tissue necrosis. Causes Bacterial brown spot in common bean (Phaseolus vulgaris), fava bean(Vicia fava), lima bean (Phaseolus lunatius), pea (Pisum sativum) and Vigna species. Leasions are brown, angular and framed in a light halo. synonym: "Bacterial Blight" EXACT [] synonym: "Bacterial brown spot" BROAD [] synonym: "Bacterial crinkle leaf spot" RELATED [] synonym: "Brown spot" RELATED [] synonym: "Halo blight (P. syringae pv phaseolicola)" RELATED [] is_a: SOY:0001683 ! Reaction to Pseudomonas infection [Term] id: SOY:0001313 name: Water Use Efficiency namespace: soybean_trait def: "Water use of the soybean plant measured as total dry weight of plant material per liter of water used." [SoyTO:rtn] comment: This trait is not synonymous with TO:0001017 Water use efficiency which is measured in a different way using different units. synonym: "WUE (QTL symbol)" RELATED [] xref: GO:GO\:0010148 "Transpiration" xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0001017 "water use efficiency" is_a: SOY:0001701 ! Drought Tolerance created_by: rnelson creation_date: 2009-12-06T03:15:03Z [Term] id: SOY:0001314 name: Reaction to Bean Yellow Mosaic Virus Infection (BYMV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by bean yellow mosaic virus." [SoyTO:004] synonym: "Bean Yellow Mosaic Potyvirus" EXACT [] synonym: "BYMV" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001315 name: Reaction to Colaspis brunnea namespace: soybean_trait def: "Reaction of the plant or plant part to Colaspis brunnea adult and larval feeding." [SoyTO:001, SOYTO:006] comment: This organism has been referred to as Colapis flavida. synonym: "Grape Colaspis" BROAD [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001606 ! Reaction to Colaspis species [Term] id: SOY:0001316 name: R5 Beginning Seed namespace: soybean_trait def: "Number of days after planting when a 3 mm pod was found at one of the four uppermost nodes that had a fully developed leaf." [SOY:001] synonym: "Developing seed stage PO:0004506" RELATED [] synonym: "Growth stage R5" EXACT [] synonym: "Reproductive growth stage 5" EXACT [] xref: PO:PO\:0004506 "developing seed stage" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000653 "seed development trait" is_a: SOY:0001987 ! Pod growth and development traits [Term] id: SOY:0001317 name: Brachytic Stem namespace: soybean_trait def: "Plant reduced in height but retaining the normal number of internodes; internode length reduced." [SOY:001] comment: Genes involved in Brachytic stem are Sb1 and Sb2. xref: PO:PO\:0009006 "shoot system" xref: TO:TO\:0000145 "internode length" is_a: SOY:0001665 ! Main Stem Architecture [Term] id: SOY:0001318 name: Branching namespace: soybean_trait def: "Tendency of plant to form primary branches, measured at maturity." [SOY:001] comment: Scored on a scale from 1 - 5, with 1= Rarely branching, and 5= profusely branching. xref: PO:PO\:0025073 "branch" xref: TO:TO\:0002639 "shoot branching" is_a: SOY:0001661 ! Main Stem Morphology [Term] id: SOY:0001319 name: Reaction to Phytophthora nicotianae infection namespace: soybean_trait def: "Reaction of the plant or plant part to Phytophthora nicotianae infection." [SoyTO:002] synonym: "Downy mildew" BROAD [] synonym: "Phloeophthora nicotianae" EXACT [] synonym: "Phytophthora lycopersici" EXACT [] synonym: "Phytophthora nicotinae" EXACT [] synonym: "Phytophthora tobaci" EXACT [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001582 ! Reaction to Phytophthora infection [Term] id: SOY:0001320 name: Reaction to Phialophora gregata infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Phialophora gergata." [SoyTO:003] comment: Genes associated with resistance Rbs1, Rbs2, Rbs3. QTL symbol is "BSR". synonym: "Brown stem rot" NARROW [] synonym: "BSR" RELATED [] synonym: "Cadophora gregata" EXACT [] synonym: "Cephalosporium gregatum" EXACT [] synonym: "Phialophora stem rot" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001321 name: Reaction to Tobacco Ringspot Virus Infection (TRSV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Tobacco ringspot Virus." [SoyTO:003] synonym: "anemone necrosis virus" EXACT [] synonym: "blueberry necrotic ringspot virus" EXACT [] synonym: "Bud blight" NARROW [] synonym: "Tobacco ring spot virus" EXACT [] synonym: "Tobacco Ringspot Nepovirus" EXACT [] synonym: "TRSV" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001322 name: Reaction to Phyllophaga congrua namespace: soybean_trait def: "Reaction to feeding by P. congrua larvae." [SOY:001] synonym: "true white grub" BROAD [] synonym: "white grub" BROAD [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001567 ! Reaction to Phyllophaga species created_by: rexnelson creation_date: 2013-04-17T09:42:14Z [Term] id: SOY:0001323 name: Reaction to Diabrotica undecimpunctata howardi namespace: soybean_trait def: "Reaction of the plant or plant part to Diabrotica undecimpunctata howardi adult and larval feeding." [SoyTO:001, SOYTO:006] synonym: "Southern corn rootworm" EXACT [] synonym: "Spotted cucumber beetle" EXACT [] xref: GO:GO\:0000961 "reaction to insect damage" xref: TO:TO\:0000510 "rootworm resistance" is_a: SOY:0001607 ! Reaction to Diabrotica species [Term] id: SOY:0001324 name: Canopy Height namespace: soybean_trait def: "The height of the leaf canopy above ground." [SoyTO:001] comment: QTL symbol is "Cnpy ht". This trait has been measured by a wooden lath placed on each plot and used to measure the average height above the ground where the lath was supported. The height of the leaf canopy in centimeters, measured at R8. synonym: "Cnpy ht" RELATED [] xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0000207 "plant height" is_a: SOY:0001365 ! Plant Height [Term] id: SOY:0001325 name: Canopy Width namespace: soybean_trait def: "Canopy width was measured at the widest point of the leaf canopy." [SoyTO:001] comment: QTL symbol is "Cnpy wdth". Has been measured at V10 stage by averaging four random measurements per plot, and measured in centimeters. synonym: "Cnpy wdth" RELATED [] xref: PO:PO\:0000003 "whole plant" is_a: SOY:0001399 ! Miscellaneous Soybean Morphological Traits [Term] id: SOY:0001326 name: Carbon Isotope Discrimination namespace: soybean_trait def: "Ratio of 13C/12C. Measured in juvenile trifoliolate leaf and used as a measure of transpiration efficiency." [SoyTO:001] comment: QTL symbol is "CID". synonym: "CID" RELATED [] xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0002643 "carbon isotope discrimination" is_a: SOY:0001410 ! Soybean Biochemical Traits [Term] id: SOY:0001327 name: Chasmogamy namespace: soybean_trait def: "A reproductive system involving potential outcrossing in open (chasmogamous) flowers." [SoyTO:001] synonym: "open flower" RELATED [] xref: PO:PO\:0007611 "petal differentiation and expansion stage" xref: PO:PO\:0009046 "flower" xref: TO:TO\:0000420 "fertility related trait" xref: TO:TO\:0000883 "chasmogamous flower" is_a: SOY:0001412 ! Soybean Fertility or Sterility Traits [Term] id: SOY:0001328 name: Chlorimuron Ethyl Sensitivity namespace: soybean_trait def: "Sensitivity to damage by chlorimuron ethyl." [SoyTO:001] comment: QTL symbol is "CES". Visual symptoms scored 1-10, where 1 = No damage, 2 = Limited chlorosis on leaf margin but no stunting, 3 = Some chlorosis and limited stunting, 4 = 20-25% of plants stunted and chlorotic, 5 = 50% of plants stunted and chlorotic, 6 = 75% of plants stunted and chlorotic, 7 = Most plants stunted and chlorotic, 8 = All plants stunted and chlorotic, 9 = Severe stunting and chlorosis, 10 = Plant death. Chlorimuron is a sulfonylurea class herbicide. synonym: "CES" RELATED [] xref: TO:TO\:0000712 "sulfonylurea herbicide sensitivity" is_a: SOY:0001951 ! Sulfonylurea herbicide sensitivity [Term] id: SOY:0001329 name: Chlorosis Score namespace: soybean_trait def: "A system to score the reduction in chlorophyll in leaves or leaflets by observation." [SoyTO:001] comment: Scored on a scale from 1 - 5, with 1= No chlorosis, and 5= Severe chlorosis. synonym: "yellowing score" RELATED [] xref: PO:PO\:0020049 "leaflet" xref: TO:TO\:0006060 "leaf chlorosis" is_a: SOY:0001343 ! Chlorosis [Term] id: SOY:0001330 name: Cleistogamy namespace: soybean_trait def: "A reproductive system involving selfing in closed (cleistogamous) flowers." [SoyTO:001] synonym: "closed flower" RELATED [] xref: PO:PO\:0007611 "petal differentiation and expansion stage" xref: PO:PO\:0009046 "flower" xref: TO:TO\:0000420 "fertility related trait" xref: TO:TO\:0000882 "cleistogamous flower" is_a: SOY:0001412 ! Soybean Fertility or Sterility Traits [Term] id: SOY:0001331 name: Reaction to Helicoverpa zea namespace: soybean_trait def: "Reaction of the plant or plant part to feeding by Helicoverpa zea larvae." [SoyTO:001, SOYTO:006] comment: QTL symbol is "CEW". synonym: "CEW (QTL symbol)" RELATED [] synonym: "Corn earworm" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001332 name: Cotyledon color namespace: soybean_trait def: "The color of the cotyledon." [SOY:001] xref: PO:PO\:0020030 "cotyledon" xref: TO:TO\:0000750 "seedling cotyledon color" is_a: SOY:0001990 ! Cotyledon Morphology [Term] id: SOY:0001333 name: Reaction to Cowpea Chlorotic Mottle Virus Infection (CCMV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Cowpea Chlorotic Mottle Virus." [SoyTO:004] comment: QTL symbol is "CCMV". Gene(s) associated with resistance are Rcv. synonym: "CCMV" EXACT [] synonym: "Cowpea Chlorotic Mottle Bromovirus" RELATED [] synonym: "Cowpea chlorotic mottle virus" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001334 name: Reaction to Cowpea Mild Mottle Virus Infection (CMMV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Cowpea mild mottle Virus." [SoyTO:003, SoyTO:004] synonym: "CMMV" EXACT [] synonym: "Cowpea Mild Mottle Carlavirus" EXACT [] synonym: "Cowpea mild Mottle Carlavirus" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001335 name: Reaction to Heterodera glycines namespace: soybean_trait def: "Reaction of the plant or plant part to Heterodera glycines of unknown race feeding." [SoyTO:004] synonym: "SCN" EXACT [] synonym: "Soybean cyst nematode" EXACT [] xref: GO:GO\:0009624 "response to nematode" xref: TO:TO\:0000384 "nematode resistance" is_a: SOY:0001404 ! Nematode Resistance [Term] id: SOY:0001336 name: Reaction to Diaporthe phaseolorum infection namespace: soybean_trait def: "Reaction of the plant or plant part to D. phaseolorum infection." [SOY:001] synonym: "Phomopsis phaseolorum" EXACT [] synonym: "Phomopsis pod and stem blight" RELATED [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001575 ! Reaction to Diaporthe infection created_by: rnelson creation_date: 2011-04-22T02:02:09Z [Term] id: SOY:0001337 name: Reaction to Xanthomonas phaseoli infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by X. phaseoli." [SOY:001] synonym: "Bacterial pustule" BROAD [] xref: TO:TO\:0000315 "bacterial disease resistance" is_a: SOY:0001685 ! Reaction to Xanthomonas infection created_by: rnelson creation_date: 2011-04-25T04:40:10Z [Term] id: SOY:0001338 name: Reaction to Xanthomonas axonopodis infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by X. axonopodis." [SOY:001] synonym: "Bacterial pustule" NARROW [] xref: TO:TO\:0000315 "bacterial disease resistance" is_a: SOY:0001685 ! Reaction to Xanthomonas infection created_by: rnelson creation_date: 2011-04-25T04:43:20Z [Term] id: SOY:0001339 name: Reaction to Pseudomonas adropogonis infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by P. adropogonis." [SOY:001] synonym: "Pseudomonas adropogonis leaf spot" NARROW [] is_a: SOY:0001683 ! Reaction to Pseudomonas infection created_by: rnelson creation_date: 2011-04-25T04:50:15Z [Term] id: SOY:0001340 name: Reaction to Pseudomonas savastanoi infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Pseudomonas savastanoi." [SOY:001] synonym: "Bacterial blight" BROAD [] is_a: SOY:0001683 ! Reaction to Pseudomonas infection created_by: rnelson creation_date: 2011-04-25T04:53:45Z [Term] id: SOY:0001341 name: Hilum abscission namespace: soybean_trait def: "Separation of the suspensor from the hilum." [SOY:001] xref: PO:PO\:0020063 "hilum" is_a: SOY:0001408 ! Soybean Growth and Development Traits created_by: rnelson creation_date: 2011-05-02T11:30:11Z [Term] id: SOY:0001342 name: Leaf Abscission namespace: soybean_trait def: "Separation of the petiole from the stem at maturity." [SOY:001] synonym: "leaf drop" BROAD [] xref: GO:GO\:0060866 "leaf abscission" xref: PO:PO\:0025034 "leaf" is_a: SOY:0001983 ! Leaflet growth and development traits created_by: rnelson creation_date: 2011-05-02T11:36:33Z [Term] id: SOY:0001343 name: Chlorosis namespace: soybean_trait def: "Reduction in chlorophyll in a plant or plant part." [SOY:001] synonym: "pale yellow" RELATED [] synonym: "yellowing" RELATED [] xref: GO:GO\:0009507 "chloroplast" xref: GO:GO\:0015995 "chlorphyll biosynthetic process" is_a: SOY:0001399 ! Miscellaneous Soybean Morphological Traits created_by: rnelson creation_date: 2011-05-03T10:09:58Z [Term] id: SOY:0001344 name: Seed cysteine content namespace: soybean_trait def: "The amount of total seed protein that is composed of cysteine." [SoyTO:001] synonym: "" RELATED [] synonym: "TO:0002673 amino acid content" NARROW [] xref: CHEBI:CHEBI\:17561 "L-cysteine" xref: GO:GO\:0019344 "cysteine biosynthetic process" xref: PO:PO\:0009010 "seed" is_a: SOY:0001757 ! Amino Acid Composition [Term] id: SOY:0001345 name: Seed daidzein content namespace: soybean_trait def: "Daidzein content of a seed." [SOY:001] comment: An isoflavone (7,4'-dihydroxyisoflavone) synthesized via the phenylpropanoid pathway. Isoflavones possess several biological and physiological activities. xref: CHEBI:CHEBI\:28197 "daidzein" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000290 "Flavonoid content" is_a: SOY:0001849 ! Seed isoflavone content [Term] id: SOY:0001346 name: Disease Resistance namespace: soybean_trait def: "Resistance to specified diseases." [SoyTO:001] xref: TO:TO\:0000112 "disease resistance" is_a: SOY:0001401 ! Biotic Stress Resistance [Term] id: SOY:0001347 name: Reaction to Peronospora manshurica infection namespace: soybean_trait def: "Reaction of the plant or plant part to Peronospora manshurica infection." [SoyTO:003] comment: Reaction to downy mildew caused by Peronospora manshurica. Based on natural infestations in the field. 1= Resistant with no lesions, 2=Few lesions, 3=Moderate lesions, 4=Numerous lesions, 5=Complete coverage with lesions. Genes associated with resistance are Rpm1 and Rpm2. synonym: "Downy mildew" BROAD [] synonym: "leaf spot" BROAD [] synonym: "Peronospora sojae" EXACT [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001580 ! Reaction to Peronospora infection [Term] id: SOY:0001348 name: Early Shattering Score namespace: soybean_trait def: "Estimated percent of pods open at harvest." [SOY:001] comment: Scale is: 1= 0% to trace, 2= Trace to 10%, 3= 10% - 25%, 4= 25% - 50%, and 5= Over 50% shattered. is_a: SOY:0001302 ! Shattering [Term] id: SOY:0001349 name: Reaction to Achrya rantalis namespace: soybean_trait def: "Reaction of the plant or plant part to Achrya rantalis larval feeding." [SoyTO:001, SOYTO:006] comment: This organism has been referred to as Loxostege similalis. synonym: "Garden webworm" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001350 name: Fasciated Stem namespace: soybean_trait def: "Stem broadened and flattened, with most of pods at stem tip." [SoyTO:001] comment: Fasciated stems branch less than nonfasciated ones. Leaf number may be increased and phyllotactic pattern altered in fasciated plants. Gene associated with the trait is the F gene. xref: PO:PO\:0009006 "shoot system" xref: TO:TO\:0000893 "stem shape" is_a: SOY:0001665 ! Main Stem Architecture [Term] id: SOY:0001351 name: Flooding Tolerance namespace: soybean_trait def: "Response of plant to inundation by water of all or part of the plant." [SoyTO:001] comment: QTL symbol is "Fld tol". Plants were subjected to 2 weeks of water-logging during early flowering (R1). Tolerance was measured by plant growth and seed yield. synonym: "submergence tolerance" RELATED [] xref: GO:GO\:0009413 "response to flooding" xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0000286 "submergence sensitivity" is_a: SOY:0001406 ! Abiotic Stress Resistance [Term] id: SOY:0001352 name: Flower Color namespace: soybean_trait def: "Color of the flower petals." [SOY:001] comment: Genes involved in flower color are W1, W3, W4 and Wm. Descriptor scoring system is Dp= Dark purple, Lp= Light purple, M= Magenta, Nw= Near white, P= Purple, Pth= Dilute purple (or purple throat), W= White. xref: PO:PO\:0009046 "flower" xref: TO:TO\:0000537 "flower color" is_a: SOY:0001985 ! Flower morphology and anatomy traits [Term] id: SOY:0001353 name: Flowering Date namespace: soybean_trait def: "Date that 50% of the plants have begun to flower." [SoyTO:001] comment: Expressed as month (1 or 2 digits) and day (2 digits); Number of days after June 31 when 50% of the individuals in a plot had at least 1 flower; Beginning bloom or the number of days after May 31 when an open flower was found at any node on the main stem. Similar to the trait Reproductive stage (Reprod) and First flower (Fflr). Their definitions are similar but synonomy can not be determined. QTL symbol FT. synonym: "TO:0000366 Reproductive growth time" BROAD [] xref: PO:PO\:0009046 "flower" xref: TO:TO\:0000344 "days to flower" xref: TO:TO\:0000369 "vegitative growth time" is_a: SOY:0001639 ! Flower development traits [Term] id: SOY:0001354 name: Leaflet Chlorosis namespace: soybean_trait def: "Reduction in the chlorophyll content of a leaflet." [SOY:001] comment: This trait is usually measured in a stressed environment. synonym: "leaf paling" RELATED [] synonym: "leaf yellowing" RELATED [] synonym: "leaflet yellowing" RELATED [] xref: PO:PO\:0020049 "leaflet" xref: TO:TO\:0006060 "leaf chlorosis" is_a: SOY:0001343 ! Chlorosis created_by: rnelson creation_date: 2011-05-03T10:12:19Z [Term] id: SOY:0001355 name: Stem Chlorosis namespace: soybean_trait def: "Reduction in the chlorophyll content of the stem." [SOY:001] comment: This trait is usually measured in a stressed environment. synonym: "stem yellowing" RELATED [] synonym: "yellow stem" RELATED [] xref: PO:PO\:0009006 "shoot system" xref: TO:TO\:0000738 "plant axis anatomy and morphology trait" is_a: SOY:0001343 ! Chlorosis created_by: rnelson creation_date: 2011-05-03T10:17:28Z [Term] id: SOY:0001356 name: Seed basic glycinin subunit content namespace: soybean_trait def: "The amount of basic protein subunits of the glycinin proteins in seeds." [SOY:001] comment: Can be measured as weight or percentage of total glycinin. xref: PO:PO\:00009010 "seed" xref: TO:TO\:0000710 "globulin protein content" is_a: SOY:0001662 ! Seed glycinin content created_by: rnelson creation_date: 2011-05-03T01:37:34Z [Term] id: SOY:0001357 name: Seed acidic glycinin subunit content namespace: soybean_trait def: "The amount of acidic subunits of the glycinins in seed protein." [SOY:001] comment: Can be measured as weight or percentage of all glycinins. xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000710 "globulin protein content" is_a: SOY:0001662 ! Seed glycinin content created_by: rnelson creation_date: 2011-05-03T01:41:24Z [Term] id: SOY:0001358 name: Asynapsis namespace: soybean_trait def: "Failure to form synapsis at pachytema." [SOY:001] comment: This is a sterility trait. Associated with St2 gene. xref: GO:GO\:0007129 "synapsis" xref: TO:TO\:0000420 "fertility related trait" is_a: SOY:0001412 ! Soybean Fertility or Sterility Traits created_by: rnelson creation_date: 2011-05-16T02:38:40Z [Term] id: SOY:0001359 name: Desynapsis namespace: soybean_trait def: "Initial formation of loose synapsis during the first synapsis, but fails to maintain synapsis during subsequent stages of meiosis." [SOY:001] xref: GO:GO\:0007129 "synapsis" xref: TO:TO\:0000485 "sterility related trait" is_a: SOY:0001412 ! Soybean Fertility or Sterility Traits created_by: rnelson creation_date: 2011-05-16T02:42:12Z [Term] id: SOY:0001360 name: S1.11 Dry Seed Stage namespace: soybean_development def: "Seed has obtained a 12% moisture content and is quiescent." [SOY:001] synonym: "Dry seed stage PO:0001040" RELATED [PO:0001040] xref: GO:GO\:0010162 "seed dormancy process" xref: PO:PO\:0001040 "dry seed stage" is_a: SOY:0001283 ! Seed Developmental Stages created_by: rnelson creation_date: 2010-08-17T02:09:04Z [Term] id: SOY:0001361 name: Reaction to Fusarium oxysporum f sp tracheiphilum infection namespace: soybean_trait def: "Reaction of the plant or plant part to Fusarium oxysporum f sp tracheiphilum infection." [SoyTO:004] comment: Two races. Race 1 infects cowpea and soybean while Race 2 infects only cowpea. synonym: "Fusarium blight" NARROW [] synonym: "Fusarium wilt" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001643 ! Reaction to Fusarium oxysporum infection [Term] id: SOY:0001362 name: Seed genistein content namespace: soybean_trait def: "Genistein content of a seed." [SoyTO:001] comment: An isoflavone (5,7,4'-Trihydroxyisoflavone) synthesized via the phenylpropanoid pathway. Isoflavones possess several biological and physiological activities. xref: CHEBI:CHEBI\:28088 "genistein" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000290 "Flavonoid content" is_a: SOY:0001849 ! Seed isoflavone content [Term] id: SOY:0001363 name: Seed glycitein content namespace: soybean_trait def: "Glycitein content of a seed." [SoyTO:001] comment: An isoflavone synthesized via the phenylpropanoid pathway. Isoflavones possess several biological and physiological activities. xref: CHEBI:CHEBI\:69442 "glycitein" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000290 "Flavonoid content" is_a: SOY:0001849 ! Seed isoflavone content [Term] id: SOY:0001364 name: Reaction to Cerotoma trifurcata namespace: soybean_trait def: "Reaction of the plant or plant part to Plathypena scabra adult and larval feeding." [SoyTO:001, SOYTO:006] synonym: "Bean leaf beetle" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001365 name: Plant Height namespace: soybean_trait def: "Plant height from ground to stem tip in centimeters measured at maturity (R8)." [SoyTO:001] comment: Genes associated with plant height are S and Df. The GRIN descriptor is a numeric field; Height in centimeters of the main stem from the unifoliate node to the fifth trifoliate node on 6 plants per plot; measured at the R8 stage. xref: PO:PO\:0006341 "primary shoot system" xref: TO:TO\:0000207 "Plant height" is_a: SOY:0001399 ! Miscellaneous Soybean Morphological Traits [Term] id: SOY:0001366 name: Height/Lodging namespace: soybean_trait def: "Height in centimeters divided by lodging score." [SoyTO:001] comment: QTL map symbol is "Ht/Ldge". synonym: "Ht/Ldge (QTL symbol)" RELATED [] xref: PO:PO\:0009006 "primary shoot sytem" xref: TO:TO\:0000068 "lodging" xref: TO:TO\:0000207 "plant height" is_a: SOY:0001399 ! Miscellaneous Soybean Morphological Traits [Term] id: SOY:0001367 name: Hilum Color namespace: soybean_trait def: "Color of the soybean seed hilum." [SoyTO:001] comment: Gene associated with the trait is I. Scoring system is: -= Combination or intermediate color, Bf= Buff, Bl= Black, Blbr= Black hilum with brown outer ring, Br= Brown, D= Dark shade (prefix), G= Gray, Gn= Green, Ib= Imperfect black, Ig= Imperfect gray, L= Light shade (prefix), Rbf=Reddish buff, Rbl= Reddish black, Rbr= Reddish brown, Tn=Tan, Y= Yellow. xref: PO:PO\:0020063 "hilum" is_a: SOY:0001409 ! Soybean Quality Traits [Term] id: SOY:0001368 name: Hypocotyl Color namespace: soybean_trait def: "The color of the hypocotyl." [SoyTO:001] xref: PO:PO\:0025291 "seedling hypocotyl" xref: TO:TO\:0000759 "seedling hypocotyl color" is_a: SOY:0001675 ! Hypocotyl Morphology [Term] id: SOY:0001369 name: Hypocotyl Length namespace: soybean_trait def: "Average length from point of initiation of first secondary root to point of attachment of cotyledons." [SoyTO:001] comment: QTL map symbol is "Hypcot lgth". synonym: "Hypcot lgth (QTL symbol)" RELATED [] xref: PO:PO\:0025291 "seedling hypocotyl" xref: TO:TO\:0006065 "seedling hypocotyl length" is_a: SOY:0001675 ! Hypocotyl Morphology [Term] id: SOY:0001370 name: Index of Parasitism namespace: soybean_trait def: "Mean number of females in given subfamily divided by number of females on susceptible germplasm times 100." [SoyTO:001] xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0000384 "nematode resistance" is_a: SOY:0001411 ! Miscellaneous Soybean Traits [Term] id: SOY:0001371 name: Reaction to insect namespace: soybean_trait def: "Reaction of the plant or plant part to damage by insects." [SoyTO:001] is_a: SOY:0001401 ! Biotic Stress Resistance [Term] id: SOY:0001372 name: Iodine Number namespace: soybean_trait def: "Iodine number. Calculated from fatty acid composition on a crude basis." [SoyTO:001] xref: TO:TO\:0000602 "total fat content" is_a: SOY:0001410 ! Soybean Biochemical Traits [Term] id: SOY:0001373 name: Iron Efficiency namespace: soybean_trait def: "Iron (Fe) deficiency may occur when certain genotypes are planted on calcareous soil. Symptoms include chlorosis of the interveinal tissues of young leaves, with the veins remaining green." [SoyTO:001] comment: QTL map symbol is "Fe effic". Plants are scored to the nearest 0.5 on a scale from 1 to 5: 1=no yellowing; 2=slight yellowing; 3=moderate yellowing; 4=intense yellowing; and 5=severe yellowing with some necrosis. Evaluation occurs primarily at V4 or V5 (4 or 5 nodes with fully developed leaves). synonym: "Fe effic (QTL symbol)" RELATED [] synonym: "IDC" EXACT [] synonym: "Iron deficiency chlorosis" RELATED [] xref: TO:TO\:0000224 "Iron sensitivity" is_a: SOY:0001812 ! Inorganic salt sensitivity [Term] id: SOY:0001374 name: Reaction to Meloidogyne namespace: soybean_trait def: "Reaction of the plant or plant part to Meloidogyne species feeding." [SoyTO:001, SoyTO:004] synonym: "Root-Knot Nematode" NARROW [] is_a: SOY:0001404 ! Nematode Resistance [Term] id: SOY:0001375 name: Reaction to Meloidogyne javanica namespace: soybean_trait def: "Reaction of the plant or plant part to Meloidogyne javanica feeding." [SoyTO:004] comment: Scoring done by counting galls on root system 30 days after inoculation. synonym: "Javanese Root-Knot Nematode" EXACT [] synonym: "Javanese rootknot nematode" EXACT [] xref: GO:GO\:0009624 "response to nematode" xref: TO:TO\:0002706 "meloidogyne javanica resistance" is_a: SOY:0001374 ! Reaction to Meloidogyne [Term] id: SOY:0001376 name: Reaction to Hoplolaimus columbus namespace: soybean_trait def: "Resistance to disease caused by Hoplolaimus columbus feeding." [SoyTO:001, SoyTO:004] comment: Scoring information not available at this time. synonym: "Columbia lance nematode" EXACT [] synonym: "Lance nematode" NARROW [] xref: GO:GO\:0009624 "response to nematode" xref: TO:TO\:0000384 "nematode damage resistance" is_a: SOY:0001585 ! Reaction to Hoplolaimus [Term] id: SOY:0001377 name: Late Shattering Score namespace: soybean_trait def: "Estimated percent of pods open 2 weeks after harvest." [SOY:001] comment: Scale is: 1= 0% to trace, 2= Trace to 10%, 3= 10% - 25%, 4= 25% - 50%, and 5= Over 50% shattered. is_a: SOY:0001302 ! Shattering [Term] id: SOY:0001378 name: Leaf Necrosis namespace: soybean_trait def: "Leaf margin necrosis appearing about 3 months after planting." [SOY:001] synonym: "leaflet necrosis" EXACT [] xref: PO:PO\:0020049 "leaflet" xref: TO:TO\:0000652 "leaf necrosis" is_a: SOY:0001983 ! Leaflet growth and development traits [Term] id: SOY:0001379 name: Leaflet Length namespace: soybean_trait def: "Average length in mm of three terminal leaflets from the upper third of plant. The average length of six fully expanded leaflets (Randomly chosen)." [SOY:001] comment: This trait is also been called "leaf length" incorrectly. The QTL map symbols are "Lf lgth" and "Lft lgth". synonym: "leaf length" NARROW [] xref: PO:PO\:0020049 "leaflet" xref: TO:TO\:0002690 "leaf lamina length" is_a: SOY:0001637 ! Leaflet Morphology created_by: rexnelson creation_date: 2013-04-04T14:30:23Z [Term] id: SOY:0001380 name: Leaflet ash content namespace: soybean_trait def: "The ash content of a leaflet." [SoyTO:001] comment: Measured as milligrams per gram of dry weight. xref: PO:PO\:0020049 "leaflet" xref: TO:TO\:0000607 "ash content" is_a: SOY:0001842 ! Mineral content [Term] id: SOY:0001381 name: Reaction to Phyllophaga implicita namespace: soybean_trait def: "Reaction of the plant or plant part to feeding by P. implicita larvae." [SOY:001] synonym: "true white grub" BROAD [] synonym: "white grub" BROAD [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001567 ! Reaction to Phyllophaga species created_by: rexnelson creation_date: 2013-04-17T09:45:13Z [Term] id: SOY:0001382 name: Leaf Scorch namespace: soybean_trait def: "Browning of leaves associated with various stresses, including Cl toxicity, herbicides, and infection with fungus Fusarium solani causing Sudden Death Syndrome." [SoyTO:001] xref: PO:PO\:0020049 "leaflet" xref: TO:TO\:0000652 "leaf necrosis" is_a: SOY:0001399 ! Miscellaneous Soybean Morphological Traits [Term] id: SOY:0001383 name: Reaction to Phyllophaga rugosa namespace: soybean_trait def: "Reaction of the plant or plant part to P. rugosa larval feeding." [SOY:001] synonym: "white grub" BROAD [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001567 ! Reaction to Phyllophaga species created_by: rexnelson creation_date: 2013-04-17T09:48:45Z [Term] id: SOY:0001384 name: Seed tocopherol content namespace: soybean_trait def: "The total tocopherol content of a seed." [SOY:001] comment: The total tocopherol content can include a number of related compounds such as alpha, delta and gamma-tocopherols. synonym: "vitamin E" EXACT [] xref: CHEBI:CHEBI\:27013 "tocopherol" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000281 "metabolite content related trait" is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rexnelson creation_date: 2013-06-28T10:15:53Z [Term] id: SOY:0001385 name: Leaflet area namespace: soybean_trait def: "Area in square mm of single leaflet from central leaflets of fully expanded leaves." [SoyTO:001] comment: QTL symbols are "Lflt area" and "Lf area". Can also be measured as area of a fully developed leaflet on the main stem, taken from each of 6 plants in the plot between R5 and R6, and measured using a planimeter. synonym: "leaf area" NARROW [] xref: PO:PO\:0020049 "leaflet" xref: TO:TO\:0000827 "leaf lamina area" is_a: SOY:0001637 ! Leaflet Morphology [Term] id: SOY:0001386 name: Leaflet Arrangement namespace: soybean_trait def: "The arrangement of the leaflets on the petiole." [SoyTO:001] xref: PO:PO\:0020049 "leaflet" is_a: SOY:0001637 ! Leaflet Morphology [Term] id: SOY:0001387 name: Leaflet Color namespace: soybean_trait def: "Color of the leaflet." [SoyTO:001] synonym: "leaf color" NARROW [] xref: PO:PO\:0020049 "leaflet" xref: TO:TO\:0000299 "leaf lamina color" is_a: SOY:0001637 ! Leaflet Morphology [Term] id: SOY:0001388 name: Leaflet number namespace: soybean_trait def: "The number of leaflets on a mature leaf, usually 3-7." [SoyTO:001] synonym: "leaf number" NARROW [] xref: PO:PO\:0020049 "leaflet" xref: TO:TO\:0002636 "leaflet number" is_a: SOY:0001637 ! Leaflet Morphology [Term] id: SOY:0001389 name: Leaflet shape namespace: soybean_trait def: "The shape of the leaflet." [SOY:001] comment: Elliptic Fourier descriptor measures 5 components, including aspect ratio of leaflet shape, location of centroid of leaflets along midrib, straightness or distortion of leaflet shape, and roundness of leaflet shape. Measured on central leaflets of fully expanded leaflets. Can also be measured as the ratio of leaflet width to leaflet length from upper third of plant. This trait has been incorrectly called "Leaf shape". QTL symbols are "Lflt shape" and "Lf shape". synonym: "leaf shape" NARROW [] xref: PO:PO\:0020049 "leaflet" xref: TO:TO\:0000492 "leaf shape" is_a: SOY:0001637 ! Leaflet Morphology [Term] id: SOY:0001390 name: Reaction to Melanagromyza sojae namespace: soybean_trait def: "Reaction of the plant or plant part to feeding by Melanagromyza sojae larvae." [SoyTO:rtn] comment: Resistance is associated with short internode distance prior to V6. Resistance is correlated with sclerenchyma differentiation leading to a physical barrier to the larva. Reduction of pith cavity also contributes to resistance. Vigna radiata (mung bean), V. cylindrica(cowpea) and Phaseolus vulgaris(snap bean) also attacked. synonym: "Beanfly" BROAD [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect created_by: rnelson creation_date: 2010-07-13T04:45:56Z [Term] id: SOY:0001391 name: Seed linoleic acid content namespace: soybean_trait def: "Linoleic acid as a percent of total oil in a seed." [SOY:001] comment: This fatty acid is also known as C18:2, LA (linoleic acid), and cis, cis-9,12-octadecadienoic acid. CAS number 60-33-3. ALA is an essential fatty acid for human nutrition. synonym: "C18:2" EXACT [] synonym: "LA" EXACT [] synonym: "octadecadienoic acid" EXACT [] xref: CHEBI:CHEBI\:17351 "linoleic acid" xref: PO:PO\:000901 "seed" xref: TO:TO\:0005001 "Linoleic acid content" is_a: SOY:0001668 ! Seed oil content [Term] id: SOY:0001392 name: Seed linolenic acid content namespace: soybean_trait def: "Linolenic acid as a percent of oil extracted from a seed." [SOY:001] comment: This fatty acid is also known as C18:3, ALA (alpha linolenic acid), (9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid and all-cis-9,12,15-octadecatrienoic acid. CAS number 463-40-1. ALA is an essential fatty acid for human nutrition. synonym: "ALA" EXACT [] synonym: "alpha-linolenic acid" RELATED [] synonym: "C18:3" EXACT [] xref: CHEBI:CHEBI\:27432 "alpha-linolenic acid" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0005005 "alpha-linolenic acid content" is_a: SOY:0001668 ! Seed oil content [Term] id: SOY:0001393 name: Lodging namespace: soybean_trait def: "Tendency of plant to lodge, measured at maturity." [SoyTO:001] comment: This trait is measured using a 1 to 5 scale: 1= Almost all plants erect, 2=All plants leaning slightly or a few plants down, 3=All plants leaning moderately (45 degrees), or 25% - 50% of plants down, 4= All plants leaning considerably, or 50% - 80% of plants down, 5= Prostrate, almost all plants down. Measured at R8. QTL map symbol is "Ldge". synonym: "Ldge (QTL symbol)" RELATED [] xref: PO:PO\:0006341 "primary shoot system" xref: TO:TO\:0000051 "stem strength" xref: TO:TO\:0000068 "lodging incidence" is_a: SOY:0001399 ! Miscellaneous Soybean Morphological Traits [Term] id: SOY:0001394 name: Long Juvenile namespace: soybean_trait def: "Delayed flowering under short-day lighting conditions." [SOY:001] xref: GO:GO\:0048575 "short-day photoperiodism, flowering" xref: PO:PO\:0007616 "flowering stage" xref: TO:TO\:0000369 "vegetative growth time" is_a: SOY:0001694 ! Photoperiod sensitivity [Term] id: SOY:0001395 name: Seed alpha-tocopherol content namespace: soybean_trait def: "The alpha-tocopherol content of a seed." [SOY:001] synonym: "Vitamin E" RELATED [] xref: CHEBI:CHEBI\:22470 "alpha-tocopherol" xref: PO:PO\:0009010 "seed" xref: TO:TO\:000281 "metabolite content related trait" is_a: SOY:0001384 ! Seed tocopherol content created_by: rexnelson creation_date: 2013-06-28T10:19:33Z [Term] id: SOY:0001396 name: Seed gamma-tocopherol content namespace: soybean_trait def: "The gamma-tocopherol content of a seed." [SOY:001] synonym: "Vitamin E" RELATED [] xref: CHEBI:CHEBI\:18185 "gamma-tocopherol" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000281 "metabolite content related trait" is_a: SOY:0001384 ! Seed tocopherol content created_by: rexnelson creation_date: 2013-06-28T10:21:07Z [Term] id: SOY:0001397 name: cpDNA Diversity namespace: soybean_trait def: "PCR-RFLP analysis of chloroplast DNA used to study diversity and maternal lineage in wild and cultivated soybean." [SoyTO:001] xref: GO:GO\:0042648 "chloroplast chromosome" xref: TO:TO\:0002715 "chloroplast development trait" is_a: SOY:0001411 ! Miscellaneous Soybean Traits [Term] id: SOY:0001398 name: Soybean Morphology and Anatomy Traits namespace: soybean_trait def: "Traits that affect soybean anatomy or morphology." [SoyTO:rtn] xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0000839 "plant structure anatomy and morphology trait" is_a: SOY:0000099 ! Soybean Trait Terms [Term] id: SOY:0001399 name: Miscellaneous Soybean Morphological Traits namespace: soybean_trait def: "Miscellaneous traits that affect soybean plant stature or vigor." [SoyTO:rtn] xref: TO:TO\:0000133 "stature or vigor trait" is_a: SOY:0000099 ! Soybean Trait Terms [Term] id: SOY:0001400 name: Soybean Stress Resistance Traits namespace: soybean_trait def: "Traits that effect soybean resistance to biotic and abiotic stresses." [SoyTO:rtn] xref: GO:GO\:0006950 "response to stress" xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0000164 "stress trait" is_a: SOY:0000099 ! Soybean Trait Terms [Term] id: SOY:0001401 name: Biotic Stress Resistance namespace: soybean_trait def: "Resistance of soybean to biological stresses." [SoyTO:rtn] synonym: "bird damage" NARROW [] synonym: "fungal damage" NARROW [] synonym: "insect damage" NARROW [] synonym: "microbial damage" NARROW [] xref: GO:GO\:0009607 "response to biotic stimulus" xref: TO:TO\:0000179 "biotic stress trait" is_a: SOY:0001400 ! Soybean Stress Resistance Traits [Term] id: SOY:0001402 name: Fungal Disease Resistance Traits namespace: soybean_trait def: "Traits conferring resistance to fungal pathogens." [SoyTO:rtn] xref: GO:GO\:0009620 "response to fungus" xref: TO:TO\:000439 "fungal disease resistance" is_a: SOY:0001346 ! Disease Resistance [Term] id: SOY:0001403 name: Bacterial Disease Resistance Traits namespace: soybean_trait def: "Resistance to bacterial diseases." [SoyTO:rtn] xref: GO:GO\:0009617 "response to bacterium" xref: TO:TO\:0000315 "bacterial disease resistance" is_a: SOY:0001346 ! Disease Resistance [Term] id: SOY:0001404 name: Nematode Resistance namespace: soybean_trait def: "Resistance of soybean roots to nematode attack." [SoyTO:rtn] is_a: SOY:0001401 ! Biotic Stress Resistance [Term] id: SOY:0001405 name: Viral Disease Resistance namespace: soybean_trait def: "Traits conferring resistance to viral pathogens." [SoyTO:rtn] is_a: SOY:0001346 ! Disease Resistance [Term] id: SOY:0001406 name: Abiotic Stress Resistance namespace: soybean_trait def: "Resistance of soybean to non-biological stresses." [SoyTO:rtn] xref: GO:GO\:0009628 "response to abiotic stimulus" xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0000168 "abiotic stress trait" is_a: SOY:0001400 ! Soybean Stress Resistance Traits [Term] id: SOY:0001407 name: Soybean Yield Traits namespace: soybean_trait def: "Traits effecting directly or indirectly soybean yield in terms of bushels per acre." [SoyTO:rtn] xref: TO:TO\:0000371 "yield trait" is_a: SOY:0000099 ! Soybean Trait Terms [Term] id: SOY:0001408 name: Soybean Growth and Development Traits namespace: soybean_trait def: "Traits that effect the growth or development of soybean plants or tissues." [SoyTO:rtn] xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:000357 "growth and development trait" is_a: SOY:0000099 ! Soybean Trait Terms [Term] id: SOY:0001409 name: Soybean Quality Traits namespace: soybean_trait def: "Any trait contributing to the improvement or overall improvement of the soybean's economic and or commercial importance." [SoyTO:rtn] xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0000597 "quality trait" is_a: SOY:0000099 ! Soybean Trait Terms [Term] id: SOY:0001410 name: Soybean Biochemical Traits namespace: soybean_trait def: "The traits associated with either a metabolite profile, chemical composition, enzymatic activity or biological or physiologic process." [SoyTO:rtn] xref: TO:TO\:0000277 "biochemical trait" is_a: SOY:0000099 ! Soybean Trait Terms [Term] id: SOY:0001411 name: Miscellaneous Soybean Traits namespace: soybean_trait def: "Soybean traits, that either cannot be assigned any of top level parent terms or are yet to be assigned a parent." [SoyTO:rtn] xref: TO:TO\:0000183 "other miscellaneous trait" is_a: SOY:0000099 ! Soybean Trait Terms [Term] id: SOY:0001412 name: Soybean Fertility or Sterility Traits namespace: soybean_trait def: "Traits affecting soybean plant fertility or sterility." [SoyTO:rtn] xref: TO:TO\:0000392 "sterility or fertility trait" is_a: SOY:0000099 ! Soybean Trait Terms [Term] id: SOY:0001413 name: Reaction to Ophiomyia phaseoli namespace: soybean_trait def: "Reaction of the plant or plant part to feeding by O. phaseoli larvae." [SoyTO:rtn] comment: Resistance is associated with short internode distance prior to V6. Resistance is correlated with sclerenchyma differentiation leading to a physical barrier to the larva. Reduction of pith cavity also contributes to resistance. Vigna radiata (mung bean), V. cylindrica(cowpea) and Phaseolus vulgaris(snap bean) also attacked. synonym: "beanfly" BROAD [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001991 ! Reaction to Ophiomyia species created_by: rnelson creation_date: 2010-07-13T04:55:37Z [Term] id: SOY:0001414 name: Seed coat color namespace: soybean_trait def: "Color of the soybean seed coat." [SoyTO:001] comment: Grading scale is -= Combination or intermediate color, Bf= Buff, Bl= Black, Br= Brown, BrBl= Brownish black, D= Deotes dark shade (prefix), G= Gray, Ggn= Grayish green, Gn= Green, Gnbl= Greenish brown, Ib= Imperfect black, L= Denotes light shade (prefix), Rbf= Reddish buff, Rbl= Reddish black, Rbr= Reddish brown, Tn= Tan, Y= Yellow). xref: PO:PO\:0009088 "seed coat" xref: TO:TO\:0000190 "seed coat color" is_a: SOY:0001409 ! Soybean Quality Traits [Term] id: SOY:0001415 name: Seed Coat Hardness namespace: soybean_trait def: "Seed coat hardness (permiability) is measured by the percent seed germination in the absence of scarification. (Scarified seed is used as a control)." [SoyTO:001] comment: QTL symbol is Seed coat hardness. xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000889 "seed coat hardness" is_a: SOY:0001409 ! Soybean Quality Traits [Term] id: SOY:0001416 name: Seed Coat Luster namespace: soybean_trait def: "Luster of the soybean seed coat." [SoyTO:001] comment: No genetic map symbol. Grading scale is: B= Bloom (heavy coating of powdery substance adhering to the seed coat), D= Dull (trace bloom), Db= Dense bloom (heavy bloom), I= Intermediate (between dull and shiny), Lb= Light bloom (slight bloom), S= Shiny (absence of bloom). xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000888 "seed coat luster" is_a: SOY:0001409 ! Soybean Quality Traits [Term] id: SOY:0001417 name: Seed Shape namespace: soybean_trait def: "General shape of seed." [SOY:001] comment: Potential values are Nr= Near round, Ob= Oblong (near rectangular in lateral outline), Ov= Oval (elliptical in lateral outline). xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000484 "seed shape" is_a: SOY:0001409 ! Soybean Quality Traits created_by: rnelson creation_date: 2011-04-19T09:25:57Z [Term] id: SOY:0001418 name: Seed Quality namespace: soybean_trait def: "Visual quality evaluation considering wrinkling, defective seed coat, greenish or diseased seeds. Scored on a scale from 1 - 5, with 1= Good and 5= Poor." [SoyTO:001] xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000162 "seed quality" is_a: SOY:0001409 ! Soybean Quality Traits [Term] id: SOY:0001419 name: Seed Set namespace: soybean_trait def: "The number of fertilized ovules in a pod that mature into viable seeds." [SoyTO:001] comment: Seed set is determined by the number of ovules per pod, and the frequency of embryo abortions. synonym: "seeds per pod" EXACT [] xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000420 "fertility related trait" is_a: SOY:0001407 ! Soybean Yield Traits [Term] id: SOY:0001420 name: Reaction to Ascochyta sajaecola infection namespace: soybean_trait def: "Reaction of the plant or plant part to Ascochyta sojaecola infection." [SoyTO:003] synonym: "Ascochyta leaf spot" EXACT [] synonym: "Phoma leaf spot" RELATED [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001572 ! Reaction to Ascochyta infection [Term] id: SOY:0001421 name: Reaction to Colletotrichum dematium infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by C. dematium." [SoyTO:003] comment: Range of values could include (R) resistant, (S) sensitive, (PR) partially sensitive. synonym: "Anthracnose" BROAD [] synonym: "Soybean anthracnose" BROAD [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001574 ! Reaction to Colletotrichum infection [Term] id: SOY:0001422 name: Reaction to Curvularia lunata infection namespace: soybean_trait def: "Reaction of the plant or plant part to Curvularia lunata infection." [SoyTO:003] synonym: "Cotyledon Spot" EXACT [] synonym: "Curvularia cotyledon spot" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001576 ! Reaction to Curvularia infection [Term] id: SOY:0001423 name: Reaction to Diaporthe sojae Infection namespace: soybean_trait def: "Reaction of the plant or plant part to Diaporthe sojae." [SoyTO:003] synonym: "Phomopsis seed decay" BROAD [] synonym: "Phomopsis sojae" EXACT [] synonym: "Pod and stem blight" BROAD [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001575 ! Reaction to Diaporthe infection [Term] id: SOY:0001424 name: Reaction to Diaporthe phaseolorum var sojae Infection namespace: soybean_trait def: "Reaction of the plant or plant part to Diaporthe phaseolorum var sojae." [SoyTO:003] comment: The anamorph of Diaporthe phaseolorum is Phomopsis phaseoli. synonym: "Diaporthe pod blight" EXACT [] synonym: "Phomopsis phaseoli var sojae" EXACT [] synonym: "Phomopsis seed decay" RELATED [] synonym: "Pod and stem blight" RELATED [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001336 ! Reaction to Diaporthe phaseolorum infection [Term] id: SOY:0001425 name: Reaction to Pseudomonas savastanoi pv glycinea infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Pseudomonas savastanoi pv glycinea." [SoyTO:004] comment: Four resistance genes identified Rpg1, Rpg2, Rpg3 and Rpg4. synonym: "Bacterial blight" EXACT [] xref: TO:TO\:0000315 "bacterial disease resistance" is_a: SOY:0001340 ! Reaction to Pseudomonas savastanoi infection [Term] id: SOY:0001426 name: Reaction to Xanthomonas axonopodis pv glycines infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Xanthomonas axonopodis pv glycines." [SoyTO:004] comment: Resistance conferred by Rxp gene. synonym: "Bacterial pustule" EXACT [] xref: TO:TO\:0000315 "bacterial disease resistance" is_a: SOY:0001338 ! Reaction to Xanthomonas axonopodis infection [Term] id: SOY:0001427 name: Reaction to Pseudomonas syringae pv glycinea infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Pseudomonas syringae pv glycinea." [SoyTO:003] comment: Symptoms include, small angular translucent or water-soaked brown to light-brown spots. As centers dry they often turn red-brown to black. Leasions are ringed in a green-yellow halo. Leasions on the stem and petiole may be large and black. Pod leasions may be small and watery but can cover the pod. Other potential hosts include bean (Phaseolus sp), cow pea (Vigna cylindrica), lima bean (Phaseolus lunata) and tepary bean (Phaseolus acultifolius). synonym: "Bacterial Blight" NARROW [] xref: TO:TO\:0000315 "bacterial disease resistance" is_a: SOY:0001312 ! Reaction to Pseudomonas syringae infection [Term] id: SOY:0001428 name: Reaction to Xanthomonas campestris pv glycines infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Xanthomonas campestris pv glycines." [SoyTO:003] comment: Symptoms include interveinal and marginal small watery lesions with a light-green boarder. Lesions enlarge and become necrotic at the center. Also causes common blight on common bean (Phaesolus vulgaris), scarlet runner bean (Phaseolus coccineus), tepary bean (Phaseolus acutifolius), and vigna species. synonym: "Bacterial pustule" NARROW [] xref: TO:TO\:0000315 "bacterial disease resistance" is_a: SOY:0001686 ! Reaction to Xanthomonas campestris infection [Term] id: SOY:0001429 name: Reaction to Xanthomonas phaseoli var sojensis infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Xanthomonas phaseoli var sojensis." [SoyTO:003] comment: Symptoms include small pale green spots on the upper and lower leaf surface. Older lesions form a light colored raised pustule (can be confused with ASR). Spots can aggredate to give irregular brown areas. Pods can have small red-brown slightly raised spots. May infect Phaseolus and Vigna species. synonym: "Bacterial pustule" NARROW [] xref: TO:TO\:0000315 "bacterial disease resistance" is_a: SOY:0001337 ! Reaction to Xanthomonas phaseoli infection [Term] id: SOY:0001430 name: Reaction to Curtobacterium flaccumfaciens pv flaccumfaciens infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Curtobacterium flaccumfaciens pv flaccumfaciens." [SoyTO:003] comment: Symptoms include a progressive leaf wilt with yellowing and vascular discoloration. Also called Bacterial Wilt on Phaseolus vulgaris (common bean), Vigna angularis (Azuki bean), Vigna mungo (Black Gram), Vigna cylindrica (Cowpea), Vigna radiata (Mung bean), Phaseolus coccineus (Scarlet Runner Bean). synonym: "Bacterial tan spot" NARROW [] synonym: "Bacterial wilt" RELATED [] xref: TO:TO\:0000315 "bacterial disease resistance" is_a: SOY:0001682 ! Reaction to Curtobacterium infection [Term] id: SOY:0001431 name: Reaction to Pseudomonas syringae pv tobaci infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Pseudomonas syringae pv tobaci." [SoyTO:003] comment: Symptoms include brown necrotic leaf spots varying in size and shape. Leasions usually bordered by a broad yellow zone or halo. Other hosts include pea (Pisum staivum), cowpea (Vigna unguiculata)), and bean (Phaseolus spp). synonym: "Wildfire" EXACT [] xref: TO:TO\:0000315 "bacterial disease resistance" is_a: SOY:0001312 ! Reaction to Pseudomonas syringae infection [Term] id: SOY:0001432 name: Reaction to Pseudomonas solanacearum infection namespace: soybean_trait def: "Reaction of the plant or plant part to Infection by Pseudomonas solanacearum." [SoyTO:003] comment: Symptoms include small dark brown lesions of leaves. Mature lesions have nectroic centers which disolve leaving a ragged appearance. synonym: "Bacterial wilt" NARROW [] xref: TO:TO\:0000315 "bacterial disease resistance" is_a: SOY:0001683 ! Reaction to Pseudomonas infection [Term] id: SOY:0001433 name: Reaction to Ralstonia solanacearum infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Ralstonia solanacearum." [SoyTO:004] comment: Symptoms include leaf chlorosis with small dark-brown spots with dark boarders. Lesions elongate and may dry out and necrotic tissue disolves leaving a ragged appearance. The entire plant may be involved. Hosts include pea (Pisum sativum) and peanut (Arachis hypogaea). synonym: "Bacterial wilt" NARROW [] xref: TO:TO\:0000315 "bacterial disease resistance" is_a: SOY:0001684 ! Reaction to Ralstonia infection [Term] id: SOY:0001434 name: Reaction to Corynebacterium floccumfaciens infection namespace: soybean_trait def: "Reaction of the plant to Corynebacterium floccumfaciens infection." [SoyTO:003] comment: Other hosts include Phaseolus vulgaris (common bean), Vigna angularis (Azuki bean), Vigna mungo (Black Gram), Vigna cylindrica (Cowpea), Vigna radiata (Mung bean), Phaseolus coccineus (Scarlet Runner Bean). synonym: "Corynebacterium wilt" RELATED [] xref: TO:TO\:0000315 "bacterial disease resistance" is_a: SOY:0001681 ! Reaction to Corynebacterium infection [Term] id: SOY:0001435 name: Reaction to Bacillus subtilis infection namespace: soybean_trait def: "Reaction of the plant or plant part to Bacillus subtilis infection." [SoyTO:004] comment: Symptoms include a soft rot like decay of seeds. synonym: "Bacillus seed decay" RELATED [] xref: TO:TO\:0000315 "bacterial disease resistance" is_a: SOY:0001680 ! Reaction to Bacillus infection [Term] id: SOY:0001436 name: Reaction to Alternaria tenussima infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Alternaria tenussima." [SoyTO:004] comment: A. tenussima is synonymous with Alternaria alternata. synonym: "Alternaria leaf spot" NARROW [] synonym: "Pod necrosis" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001570 ! Reaction to Alternaria infection [Term] id: SOY:0001437 name: Reaction to Colletotrichum truncatum infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Colletotrichum truncatum ." [SoyTO:004] comment: Range of values could include (R) resistant and (S) sensitive. synonym: "Anthracnose" NARROW [] synonym: "Pod Blight" BROAD [] synonym: "Vermicularia truncata" EXACT [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001574 ! Reaction to Colletotrichum infection [Term] id: SOY:0001438 name: Reaction to Colletotrichum coccodes infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Colletotrichum coccodes." [SoyTO:004] comment: Possible values include (R) resistant, (S) sensitive. synonym: "Anthracnose" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001574 ! Reaction to Colletotrichum infection [Term] id: SOY:0001439 name: Reaction to Glomerella glycines infection namespace: soybean_trait def: "Reaction of the plant or plant part to Glomerella glycines infection." [SoyTO:004] comment: Anamorph of Glomerella glycines is Colletotrichum destructivum. Range of values could include (R) resistant, (S) sensitive or (I) intermediate. synonym: "Anthracnose" NARROW [] synonym: "Colletotrichum destructivum" EXACT [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001706 ! Reaction to Glomerella infection [Term] id: SOY:0001440 name: Reaction to Spodoptera exigua namespace: soybean_trait def: "Reaction of the plant or plant part to Spodoptera exiqua larval feeding." [SoyTO:001] comment: This organism has been referred to as Laphygma exigua. Foliar feeding damage cause by the beet armyworm (Spodoptera exigua). Scored based on a scale from 1 - 5. 1= 0% - 20% defoliated, 2= 21% - 40% defoliated, 3= 41% - 60% defoliated, 4= 61% - 80% defoliated, 5= 81% - 100% defoliated. synonym: "Beet armyworm" EXACT [] synonym: "Laphygma exigua" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001697 ! Reaction to Spodoptera species [Term] id: SOY:0001441 name: Reaction to Glomerella cingulata infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Glomerella cingulata." [SoyTO:004] comment: The anamorph of Glomerella cingulata is Colletotrichum gloeosporiodes. synonym: "Anthracnose" NARROW [] synonym: "Colletotrichum gloeosporiodes" EXACT [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001706 ! Reaction to Glomerella infection [Term] id: SOY:0001442 name: Reaction to Aristastoma comarographioides infection namespace: soybean_trait def: "Resistance to disease caused by Aristastoma camarographioides." [SoyTO:004] comment: Symptoms include small irregular interveinal leaf spots. May have chlorotic halo. May cause diffuse chlorosis on lower leaves and a stunted stature. synonym: "Aristastoma leaf spot" EXACT [] synonym: "Aristastoma yellowing" EXACT [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001571 ! Reaction to Aristastoma infection [Term] id: SOY:0001443 name: Reaction to Aristastoma guttulosom infection namespace: soybean_trait def: "Reistance to disease caused by Aristastoma guttulosom infection." [SoyTO:004] comment: Symptoms include small irregular interveinal leaf spots. May have chlorotic halo. May cause diffuse chlorosis on lower leaves and a stunted stature. synonym: "Aristastoma leaf spot" NARROW [] synonym: "Aristastoma yellowing" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001571 ! Reaction to Aristastoma infection [Term] id: SOY:0001444 name: Reaction to Arkoola nigra infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Arkoola nigra." [SoyTO:004] comment: Symptoms include severe spotting of leaves, stems and pods. Lesions are gray to brown with a thin dark brown margin. Mature lesions may merge with necrotic centers that tear out leaving a ragged appearance. synonym: "Black leaf blight" EXACT [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001445 name: Reaction to Mycosphaerella uspenskajae infection namespace: soybean_trait def: "Reaction of the plant or plant part to Mycosphaerella uspenkajae infection." [SoyTO:004] comment: The anamorph of Mycosphaerells upenskajae is Septoria glycines. Range of values could include (R) resistant, (S) sensitive and (I) intermediate. synonym: " Septoria glycine" EXACT [] synonym: "Brown spot" NARROW [] synonym: "Septoria leaf spot" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001578 ! Reaction to Mycosphaerella infection [Term] id: SOY:0001446 name: Reaction to Mycosphaerella phaseolorum infection namespace: soybean_trait def: "Reaction of the plant or plant part to Mycosphaerella phaseolorum infection." [SoyTO:004] comment: Range of values could include (R) resistant, (S) sensitive and (I) intermediate. synonym: "Brown spot" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001578 ! Reaction to Mycosphaerella infection [Term] id: SOY:0001447 name: Reaction to Botrytis cinerae infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Botrytis cinerae." [SoyTO:003] synonym: "Botryotinia fuckeliana" EXACT [] synonym: "Botrytis stem rot" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001448 name: Reaction to Cercospora kikuchii infection namespace: soybean_trait def: "Reaction of the plant or plant part to Cercospora kikuchii infection." [SoyTO:003, SoyTO:004] synonym: "Cercospora blight" NARROW [] synonym: "Cercospora leaf spot" NARROW [] synonym: "Lavender spot" RELATED [] synonym: "Purple blotch" RELATED [] synonym: "Purple seed stain" RELATED [] synonym: "Purple spot" NARROW [] synonym: "Purple stain" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001573 ! Reaction to Cercospora infection [Term] id: SOY:0001449 name: Reaction to Ascochyta sojae infection namespace: soybean_trait def: "Reaction of the plant or plant part to Ascochyta sojae infection." [SoyTO:003] synonym: "Aschochyta leaf spot" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001572 ! Reaction to Ascochyta infection [Term] id: SOY:0001450 name: Reaction to Ascochyta phaseolorum infection namespace: soybean_trait def: "Reaction of the plant or plant part to Ascochyta phaseolorum infection." [SoyTO:003] comment: This taxon is a synonym of Phoma exigua. synonym: "Ascochyta leaf spot" RELATED [] synonym: "Phoma exigua" EXACT [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001572 ! Reaction to Ascochyta infection [Term] id: SOY:0001451 name: Reaction to Curvularia lunata var aeria infection namespace: soybean_trait def: "Reaction of the plant or plant part to Curvularia lunata var aeria infection." [SoyTO:003] synonym: "Cotyledon Spot" NARROW [] synonym: "Curvularia cotyledon spot" RELATED [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001576 ! Reaction to Curvularia infection [Term] id: SOY:0001452 name: Reaction to Peronospora sojae infection namespace: soybean_trait def: "Reaction of the plant or plant part to Peronopora sojae infection." [SoyTO:003] synonym: "Downy mildew" NARROW [] synonym: "leaf spot" BROAD [] synonym: "Peronospora manshurica" EXACT [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001580 ! Reaction to Peronospora infection [Term] id: SOY:0001453 name: Reaction to Drechslera glycines infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Drechslera glycines." [SoyTO:004] synonym: "Drechslera blight" EXACT [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001454 name: Reaction to Fusarium oxysporum f sp vasinfectum infection namespace: soybean_trait def: "Reaction of the plant or plant part to Fusarium oxysporum f sp vasinfectum infection." [SoyTO:004] synonym: "Fusarium blight" NARROW [] synonym: "Fusarium wilt" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001643 ! Reaction to Fusarium oxysporum infection [Term] id: SOY:0001455 name: Reaction to Fusarium pallidoroseum infection namespace: soybean_trait def: "Resistance to disease caused by Fusarium pallidoroseum infection." [SoyTO:004] synonym: "Pod and collor rot" EXACT [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001577 ! Reaction to Fusarium infection [Term] id: SOY:0001456 name: Reaction to Fusarium solani infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Fusarium solani." [SoyTO:004] synonym: "Fusarium root rot" RELATED [] synonym: "Preemergence damping-off" NARROW [] synonym: "Root rot" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001577 ! Reaction to Fusarium infection [Term] id: SOY:0001457 name: Reaction to Diaporthe longicolla Infection namespace: soybean_trait def: "Reaction of the plant or plant part to Diaporthe longicolla infection." [SoyTO:004] comment: Along with other Diaporthe species this organism causes phomopsis seed decay (PSD). synonym: "Phomopsis longicolla" EXACT [] synonym: "Phomopsis seed decay" EXACT [] synonym: "Seed decay" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001575 ! Reaction to Diaporthe infection [Term] id: SOY:0001458 name: Reaction to Diaporthe phaseolorum var caulivora Infection namespace: soybean_trait def: "Reaction of the plant or plant part to Diaporthe phaseolorum var caulivora infection." [SoyTO:004] comment: The anamorph of Diaporthe phaseolorum is Phomopsis phaseoli. synonym: "Northern stem canker" RELATED [] synonym: "Phomopsis phaseoli" EXACT [] synonym: "Phomopsis phaseolorum var caulivora" EXACT [] synonym: "Stem canker" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001336 ! Reaction to Diaporthe phaseolorum infection [Term] id: SOY:0001459 name: Reaction to Diaporthe phaseolorum var meridionalis Infection namespace: soybean_trait def: "Reaction of the plant or plant part to Diaporthe phaseolorum var meridionalis infection." [SoyTO:004] synonym: "Phomopsis paseolorum var meridionalis" EXACT [] synonym: "Southern stem canker" RELATED [] synonym: "Stem canker" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001336 ! Reaction to Diaporthe phaseolorum infection [Term] id: SOY:0001460 name: Reaction to Fusarium solani f sp glycines infection namespace: soybean_trait def: "Reaction of the plant or plant part to Fusarium solani f. sp. glycines infection." [SOY:001] synonym: "SDS" EXACT [] synonym: "Sudden Death Syndrome" RELATED [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001456 ! Reaction to Fusarium solani infection [Term] id: SOY:0001461 name: Reaction to Phytophthora megasperma f sp glycinea infection namespace: soybean_trait def: "Reaction of the plant or plant part to Phytophthora megasperma f sp glycinea infection." [SoyTO:004] comment: This organism has been known as P megasperma f sp sojae, P sojae, and P cactorum. Seven resistance genes have been identified, Rps 1a, 1b, 1c, 1d, 1k, 3a, 6 and 7. QTL symbol is Rps. synonym: "Phytophthora root and stem rot" RELATED [] synonym: "Phytophthora rot" RELATED [] synonym: "Phytophthora stem rot" RELATED [] synonym: "Rps (QTL symbol)" RELATED [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001582 ! Reaction to Phytophthora infection [Term] id: SOY:0001462 name: Reaction to Pythium aphanidermatum infection namespace: soybean_trait def: "Reaction of the plant or plant part to Pythium aphanidermatum infection." [SoyTO:004] synonym: "Pythium damping-off" NARROW [] synonym: "Pythium root rot" NARROW [] synonym: "Root rot" BROAD [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001584 ! Reaction to Pythium infection [Term] id: SOY:0001463 name: Reaction to Pythium debaryanum infection namespace: soybean_trait def: "Reaction of the plant or plant part to Pythium debaryanum infection." [SoyTO:004] synonym: "Globisporangium debaryanum" EXACT [] synonym: "Pythium damping-off" RELATED [] synonym: "Pythium root rot" NARROW [] synonym: "Root rot" RELATED [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001584 ! Reaction to Pythium infection [Term] id: SOY:0001464 name: Reaction to Pythium irregulare infection namespace: soybean_trait def: "Reaction of the plant or plant part to Pythium irregulare infection." [SoyTO:004] synonym: "Globioporangium irregulare" EXACT [] synonym: "Pythium damping-off" RELATED [] synonym: "Pythium root rot" NARROW [] synonym: "Root rot" RELATED [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001584 ! Reaction to Pythium infection [Term] id: SOY:0001465 name: Reaction to Pythium ultimum infection namespace: soybean_trait def: "Reaction of the plant or plant part to Pythium ultimum infection." [SoyTO:004] synonym: "Globiosporangium ultimum" EXACT [] synonym: "Pythium damping-off" RELATED [] synonym: "Pythium root rot" NARROW [] synonym: "Root rot" RELATED [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001584 ! Reaction to Pythium infection [Term] id: SOY:0001466 name: Reaction to Choanephora infundibulifera infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Choanephora infundibulifera." [SoyTO:004] synonym: "Blakeslea leaf blight" RELATED [] synonym: "Choanephora leaf blight" EXACT [] synonym: "Choanephora wet rot" RELATED [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001467 name: Reaction to Leptosphaerulina trifolii infection namespace: soybean_trait def: "Reaction of the plant or plant part to Leptophaerulina trifolii infection." [SoyTO:004] comment: Range of values could include (R) resistant, (S) sensitive and (I) intermediate. synonym: "Leptoshaerulina leaf spot" EXACT [] xref: GO:GO\:0009620 "response to fungus" xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001468 name: Reaction to Pleosphaerulina sojicola infection namespace: soybean_trait def: "Reaction of the plant or plant part to Pleosphaerulina sojicola infection." [SoyTO:0001, SoyTO:004] comment: The anamorph of Pleosphaerulina sojicola is Phyllosticta sojicola.\nThis organism has also been referred to as Phylosticta sojaecola, Phylosticta sojicola, Phylosticta glycinea, and Phylosticta glycineum. synonym: "Phyllosticta leaf spot" EXACT [] synonym: "Phyllosticta sojicola" EXACT [] synonym: "Phylosticta glycinea" EXACT [] synonym: "Phylosticta glycineum" EXACT [] synonym: "Phylosticta leaf blight" EXACT [] synonym: "Phylosticta sojaecola" EXACT [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001469 name: Reaction to Dactuliochaeta glycines infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Dactuliochaeta glycines." [SoyTO:004] comment: The sclerotial state of Dactuliochaeta glycines is Dactuliophora glycines. synonym: "Dactuliophora glycines" EXACT [] synonym: "Pyrenochaeta glycines" EXACT [] synonym: "Red leaf blotch" EXACT [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001470 name: Reaction to Thanatephorus cucumeris infection namespace: soybean_trait def: "Reaction of the plant or plant part by Thanatephorus cucumeris infection." [SoyTO:004] comment: The anamorph of Thanatephorus cucumeris is Rhizoctonia solani. Disease in soybean is caused by T. cucumeris anastimosis group 1, intraspecific group A (IA) and intraspecific group B (IB). Causes Rhizoctonia root rot in common beans. synonym: "Rhizoctonia aerial blight" RELATED [] synonym: "Rhizoctonia damping-off" BROAD [] synonym: "Rhizoctonia foliage blight" RELATED [] synonym: "Rhizoctonia foliar blight" EXACT [] synonym: "Rhizoctonia hypotcoyl rot" BROAD [] synonym: "Rhizoctonia leaf blight" RELATED [] synonym: "Rhizoctonia preemergence blight" BROAD [] synonym: "Rhizoctonia root decay" RELATED [] synonym: "Rhizoctonia root rot" RELATED [] synonym: "Rhizoctonia solani." EXACT [] synonym: "Rhizoctonia web blight" RELATED [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001471 name: Reaction to Phakopsora meibomiae infection namespace: soybean_trait def: "Reaction of the plant or plant part to Phakopsora meibomiae infection." [SoyTO:004] comment: The anamorph of Phakopsora meibomiae is Malupa vignae. Disease severity scale is 1= no visible lesions, 2= few scattered lesions present, 3= moderate number of lesions on at least part of the leaf, 4= abundant number of lesions on part of the leaf, 5= prolific lesions over most of the leaf. Note, measurements taken on the first trifoliolate leaf but other leaf nodes have been used. synonym: "Malupa vignae" EXACT [] synonym: "Soybean rust" EXACT [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001581 ! Reaction to Phakopsora infection [Term] id: SOY:0001472 name: Reaction to Phakopsora pachyrhizi infection namespace: soybean_trait def: "Reaction of the plant or plant part to Phakopsora pachyrhizi infection." [SoyTO:004] comment: The anamorph of Phakopsora pachyrhizi is Malupa sojae. Disease severity scale is 1= no visible lesions, 2= few scattered lesions present, 3= moderate number of lesions on at least part of the leaf, 4= abundant number of lesions on part of the leaf, 5= prolific lesions over most of the leaf. Note, measurements taken on the first trifoliolate leaf but other leaf nodes have been used. synonym: "Asian Soybean Rust" NARROW [] synonym: "Malupa sojae" EXACT [] synonym: "Soybean Rust" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001581 ! Reaction to Phakopsora infection [Term] id: SOY:0001473 name: Reaction to Sphaceloma glycines infection namespace: soybean_trait def: "Reaction of the plant or plant part to Sphaceloma glycines infection." [SoyTO:004] comment: Primarily a disease in Japan. Considered destructive. synonym: "KoKuto-byo" RELATED [] synonym: "Scab" EXACT [] synonym: "Sphaceloma scab" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001474 name: Reaction to Pleospora tarda infection namespace: soybean_trait def: "Reaction of the plant or plant part to Pleospora tarda infection." [SoyTO:004] comment: The anamorph of Pleospora tarda is Stemphylium botryosum. Known to have a broad host range. synonym: "Stemphylium botryosum" EXACT [] synonym: "Stemphylium leaf blight" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001583 ! Reaction to Pleospora infection [Term] id: SOY:0001475 name: Reaction to Pleospora herbarum infection namespace: soybean_trait def: "Reaction of the plant or plant part by Pleospora herbarum infection." [SoyTO:004] comment: The anamorph of Pleospora herbarum is Stemphylium herbarum. synonym: "Stemphylium herbarum" EXACT [] synonym: "Stemphylium leaf blight" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001583 ! Reaction to Pleospora infection [Term] id: SOY:0001476 name: Reaction to Pleospora allii infection namespace: soybean_trait def: "Reaction of the plant or plant part by Pleospora allii infection." [SoyTO:004] comment: The anamorph of Pleospora allii is Stemphylium vesicaium. synonym: "Stemphylium leaf blight" NARROW [] synonym: "Stemphylium vesicaium" EXACT [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001583 ! Reaction to Pleospora infection [Term] id: SOY:0001477 name: Reaction to Corynespora cassiicola infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Corynepora cassicola." [SoyTO:004] synonym: "Target spot" EXACT [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001478 name: Reaction to Macrophomina phaseolina infection namespace: soybean_trait def: "Reaction of the plant or plant part to Macrophomina phaseolina infection." [SoyTO:004] comment: Range of values could include (R) resistant, (S) sensitive and (I) intermediate. synonym: "Charcoal rot" EXACT [] synonym: "Dry-weather wilt" RELATED [] synonym: "Summer wilt" RELATED [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001479 name: Reaction to Sclerotinia sclerotiorum infection namespace: soybean_trait def: "Reaction of the plant or plant part to Sclerotinia sclerotiorum infection." [SoyTO:003, SoyTO:004, SoyTO:005] comment: Broad host range. Causes disease in soybean, Phaseolus ssp, pea and peanut. Causes Sclerotinia White Mold on peas, White Mold on beans and Sclerotinia Blight on peanuts. synonym: "Sclerotinia stem rot" EXACT [] synonym: "Soybean white mold" EXACT [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001687 ! Reaction to Sclerotinia infection [Term] id: SOY:0001480 name: Reaction to Athelia rolfsii infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Athelia rolfsii." [SoyTO:004] comment: The anamorph to Athelia rolfsii is Sclerotium rolfsii. This organism has also been known as Corticium rolfsii, Pellacularia rolfsii and Sclerotia delphinii. The organism attacks a wide variety of plants. synonym: "Sclerotium blight" EXACT [] synonym: "Southern Blight" EXACT [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001481 name: Reaction to Thielaviopsis basicola infection namespace: soybean_trait def: "Reaction of the plant or plant part to Thielaviopsis basicola infection." [SoyTO:004] comment: This organism has also been referred to as Chalaria elegans, and Torula basicola. It has a wide host range infecting soybean, pea, peanut, common bean, cotton, corn, carrot, tomato, tobacco, celery, squash and sweet potato. The disease in pea is called Theilaviopsis root rot, black hull in peanut and black root rot in beans. synonym: "Black hull (peanut)" EXACT [] synonym: "Black root rot (beans)" RELATED [] synonym: "Chalaria elegans" EXACT [] synonym: "Thielaviopsis root rot" EXACT [] synonym: "Torula basicola" EXACT [] synonym: "Trichocladium basicola" EXACT [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001482 name: Reaction to Gliochadium roseum infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Gliocladium roseum." [SoyTO:004] comment: The teleomorph of this organism may be Nectria ochroleuca. synonym: "Nectria ochroleuca" NARROW [] synonym: "Verticillium stem rot" RELATED [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001483 name: Reaction to Mycoleptodiscus terrestris infection namespace: soybean_trait def: "Reaction of the plant or plant part to Mycoleptodiscus terrestris infection." [SoyTO:004] comment: Range of values could include (R) resistant, (S) sensitive and (I) intermediate. synonym: "Crown and root rot" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001484 name: Reaction to Neocosmospora vasinfecta infection namespace: soybean_trait def: "Reaction of the plant or plant part to Neocosmospora vasinfecta infection." [SOY:001] comment: The anamorph of Neocosmospora vasinfecta is Acremonium sp. Range of values could include (R) resistant, (S) sensitive and (I) intermediate. synonym: "Acremonium" NARROW [] synonym: "Neocosmospora Stem Rot" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001485 name: Reaction to Myrothecium roridum infection namespace: soybean_trait def: "Reaction of the plant or plant part to Myrothecium roridum infection." [SoyTO:003] synonym: "Myrothecium leaf spot" NARROW [] synonym: "Myrothecium leaf spot and pod blight" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001579 ! Reaction to Myrothecium infection [Term] id: SOY:0001486 name: Reaction to Myrothecium verrucaria infection namespace: soybean_trait def: "Reaction of the plant or plant part to Myrothecium verrucaria infection." [SoyTO:003] synonym: "Gliocladium fimbriatum" EXACT [] synonym: "Metarhizium glutinosum" EXACT [] synonym: "Myrothecium leaf spot" NARROW [] synonym: "Myrothecium leaf spot and pod blight" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001579 ! Reaction to Myrothecium infection [Term] id: SOY:0001487 name: Reaction to Microsphaera diffusa infection namespace: soybean_trait def: "Reaction of the plant or plant part to Microsphaera diffusa infection." [SoyTO:003, SoyTO:004] comment: Range of values could include (R) resistant, (S) sensitive and (I) intermediate. synonym: "Powdery mildew" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001488 name: Reaction to Pseudomonas adropogonis pv sojae infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Pseudomonas andropogonis pv sojae." [SoyTO:003] synonym: "Pseudomonas adropogonis leaf spot" EXACT [] xref: TO:TO\:0000315 "bacterial disease resistance" is_a: SOY:0001339 ! Reaction to Pseudomonas adropogonis infection [Term] id: SOY:0001489 name: Reaction to Black Gram Mottle Virus Infection (BMoV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Black gram mottle Virus." [SoyTO:003, SoyTO:004] synonym: "Black gram mottle carmovirus" EXACT [] synonym: "BMoV" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001490 name: Reaction to Bean Pod Mottle Virus Infection (BPMV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Bean pod mottle Virus." [SoyTO:004] synonym: "Bean pod mottle comovirus" EXACT [] synonym: "BPMV" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001491 name: Reaction to Cowpea severe mosaic Virus Infection (CPSMV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Cowpea severe mosaic Virus." [SoyTO:004] synonym: "Cowpea Severe Mosaic Comovirus" EXACT [] synonym: "CPSMV" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001492 name: Reaction to Soybean Stunt Virus Infection (SSV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Soybean Stunt Virus." [SoyTO:004] comment: This virus infects a wide range of species. synonym: "banana infectious chlorosis virus" EXACT [] synonym: "Coleus mosaic virus" EXACT [] synonym: "Cowpea banding mosaic virus" EXACT [] synonym: "Cowpea ringspot virus" EXACT [] synonym: "lily ringspot virus" EXACT [] synonym: "pea top necrosis virus" EXACT [] synonym: "Pea western ringspot virus" EXACT [] synonym: "Peanut yellow mosaic virus" EXACT [] synonym: "Southern celery mosaic virus" EXACT [] synonym: "Soybean stunt cucumovirus" EXACT [] synonym: "spinach blight virus" EXACT [] synonym: "SSV" EXACT [] synonym: "Tomato fern leaf virus" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001493 name: Reaction to Peanut Stunt Virus Infection (PSV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Peanut Stunt Virus." [SoyTO:004] synonym: "black locust true mosaic virus" RELATED [] synonym: "clover blotch virus" RELATED [] synonym: "Peanut Stunt Cucumovirus" EXACT [] synonym: "Peanut stunt cucumovirus" EXACT [] synonym: "Peanutstunt virus" EXACT [] synonym: "PSV" EXACT [] synonym: "Robinia mosaic virus" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001494 name: Reaction to Soybean Yellow Vein Virus Infection (SbYVV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Soybean Yellow Vein Virus." [SoyTO:004] synonym: "SbYVV" EXACT [] synonym: "Soybean Yellow Vein Furovirus" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001495 name: Reaction to Tobacco Streak Virus Infection (TSV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Tobacco Streak Virus." [SoyTO:004] synonym: "Asparagus stunt virus" EXACT [] synonym: "Brazilian bud blight" EXACT [] synonym: "Strawberry necrotic shock virus" EXACT [] synonym: "Tobacco Streak Ilarvirus" EXACT [] synonym: "TSV" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001496 name: Reaction to Indonesian Soybean Dwarf Virus Infection (ISDV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Indonesian Soybean Dwarf Virus." [SoyTO:004] synonym: "Indonesian Soybean Dwarf Luetovirus" EXACT [] synonym: "ISDV" EXACT [] synonym: "Soybean indonesian dwarf virus" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001497 name: Reaction to Soybean Dwarf Virus Infection (SbDV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Soybean Dwarf Virus." [SoyTO:004] comment: Plant Viruses Online database says that this organism is also known as strawberry mild yellow edge luteovirus and subterranean clover red leaf luteovirus. synonym: "SbDV" EXACT [] synonym: "Soybean Dwarf luteovirus" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001498 name: Reaction to Soybean Severe Stunt Virus Infection (SSSV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Soybean Severe Stunt Virus." [SoyTO:004] comment: This virus was not in Plant Viruses Online database. synonym: "Soybean Severe Stunt Nepovirus" EXACT [] synonym: "SSSV" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001499 name: Reaction to Peanut Mottle Virus Infection (PeMoV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Peanut Mottle Virus." [SoyTO:004] synonym: "Groundnut mottle virus" EXACT [] synonym: "Mottle" NARROW [] synonym: "Peanut mild mosaic virus" EXACT [] synonym: "Peanut Mottle Potyvirus" EXACT [] synonym: "Peanut severe mosaic virus" EXACT [] synonym: "PeMoV" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001500 name: Reaction to Peanut Stripe Virus Infection (PStV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Peanut Stripe Virus." [SoyTO:004] comment: This organism is not in the ICTV database. Plant viruses online database says this organism is synonymous with Bean common mosaic virus. synonym: "Peanut Stripe Potyvirus" EXACT [] synonym: "PStV" RELATED [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001501 name: Reaction to Soybean Mosaic Virus Infection (SMV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Soybean Mosaic Virus." [SoyTO:004] synonym: "SMV" EXACT [] synonym: "Soybean crinkle" EXACT [] synonym: "Soybean Mosaic Potyvirus" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001502 name: Reaction to Tobacco Mosaic Virus Infection (TMV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Tobacco Mosaic Virus." [SoyTO:004] synonym: "TMV" EXACT [] synonym: "TMV-S" EXACT [] synonym: "Tobacco Mosaic Tobamovirus" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001503 name: Reaction to African Soybean Dwarf Virus Infection (SbDV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by African Soybean Dwarf Virus." [SoyTO:004] synonym: "African Soybean Dwarf Alfamovirus" EXACT [] synonym: "African Soybean Dwarf virus" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001504 name: Reaction to Mung Bean Yellow Mosaic Virus Infection (MYMV) namespace: soybean_trait def: "Resistance to disease caused by Mung Bean Yellow Mosaic Virus infection." [SoyTO:004] comment: Plant viruses online has this organism a member of the bigeminiviridae but ICTV has it as a begomo virus. synonym: "Mung Bean Yellow Mosaic Bigeminivirus" EXACT [] synonym: "Mungbean Yellow Mosaic Begomovirus" EXACT [] synonym: "Mungbean Yellow Mosaic Virus" EXACT [] synonym: "MYMV" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001505 name: Reaction to Soybean Crinkle Leaf Virus Infection (SCLV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Soybean Crinkle Leaf Virus." [SOY:001] comment: Plant Viruses Online has this organism as a bigeminivirus, but ICTV has it as a begomovirus. synonym: "SCLV" EXACT [] synonym: "Soybean crinkle leaf begomovirus" EXACT [] synonym: "Soybean Crinkle Leaf Virus" RELATED [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001506 name: Reaction to Soybean Chlorotic Mottle Virus Infection (SbCmV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Soybean Chlorotic Mottle Virus." [SoyTO:004] comment: Not in the Plant Viruses Online database. In ICTV online. synonym: "SbCmV" EXACT [] synonym: "Soybean Chlorotic Mottle Luteovirus" EXACT [] synonym: "Soybean chlorotic mottle soymovirus" EXACT [] synonym: "Subterranean clover red leaf virus" EXACT [] synonym: "subterranean red leaf luteovirus" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001507 name: Reaction to Soybean Mild Mosaic Virus Infection (SMMV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Soybean Mild Mosaic Virus." [SoyTO:004] comment: SMMV has yet to be assigned to a virus family group. synonym: "SMMV" EXACT [] synonym: "Soybean Mild Mosaic" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001508 name: Reaction to Cucumber Mosaic Virus Infection (CuMV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Cucumber Mosaic Virus." [SoyTO:003] synonym: "Cucumber Mosaic Cucumoirus" EXACT [] synonym: "CuMV" EXACT [] synonym: "Soybean stunt" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001509 name: Reaction to Azuki Mosaic Virus Infection (AzMV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Azuki Mosaic virus." [SoyTO:003] comment: Plant Viruses Online database lists this organism as a synonym of Bean Common Mosaic Virus. synonym: "AzMV" EXACT [] synonym: "Azuki mosaic" EXACT [] synonym: "Bean Common Mosaic Virus" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001510 name: Reaction to Abutilon Mosaic Virus Infection (AbMV) namespace: soybean_trait def: "Reaction of a plant or plant part to infection by Abutilon Mosaic Virus." [SoyTO:003] synonym: "AbMV" EXACT [] synonym: "Abutilon mosaic" RELATED [] synonym: "Abutilon Mosaic Bigeminivirus" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001511 name: Reaction to Bean Chlorotic Ringspot virus Infection (BCRV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Bean Chlorotic Ringspot virus." [SoyTO:003] comment: This virus is not listed with the Plant Viruses Online database. synonym: "Bean chlorotic ringspot" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001512 name: Reaction to Bean Common Mosaic Virus Infection (BCMV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Bean Common Mosaic Virus." [SoyTO:003] synonym: "BCMV" EXACT [] synonym: "Bean Common Mosaic" EXACT [] synonym: "Bean Common mosaic potyvirus" EXACT [] synonym: "Blackeye Cowpea Mosaic Virus" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001513 name: Reaction to Blackeye Cowpea Mosaic Virus Infection (BICMV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Blackeye Cowpea Mosaic Virus." [SoyTO:003] synonym: "Bean Common Mosaic potyvirus" EXACT [] synonym: "Bean Common MosaicVirus" EXACT [] synonym: "Blackeye Cowpea Mosaic Potyvirus" EXACT [] synonym: "BlCMV" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance [Term] id: SOY:0001514 name: Phytoplasma disease resistance traits namespace: soybean_trait def: "Resistance to disease caused by phytoplasma or mycobacterial like organism." [SoyTO:004] xref: TO:TO\:0000013 "resistance to disease by mycoplasma-like organisms" is_a: SOY:0001346 ! Disease Resistance [Term] id: SOY:0001515 name: Bud proliferation namespace: soybean_trait def: "Resistance to the development of Bud proliferation." [SoyTO:003, SoyTO:004] comment: May be called Q disease or soybean bud proliferation. Causitive agent unknown at this time. Symptoms include delayed maturity and plants still green at harvest time. There may be proliferation of adventitious budding. Can be transmitted by Scaphytopius acutus (leafhopper) feeding. synonym: "Q disease" EXACT [] synonym: "Soybean bud proliferation" EXACT [] xref: TO:TO\:0000013 "resistance to disease by mycoplasma-like organisms" is_a: SOY:0001514 ! Phytoplasma disease resistance traits [Term] id: SOY:0001516 name: Machismo namespace: soybean_trait def: "Resistance to disease caused by the Machismo organism." [SoyTO:003, SoyTO:004] comment: Machismo symptoms include floral organs appearing leaf-like and proliferation of buds from leaf axils. May resemble Withes-broom. May be unilateral with one part of the plant symptomatic and other parts apparently unaffected. May be transmitted by the leafhopper Scaphytopius fulininosus. May infect field bean, and pigeon pea. synonym: "Amachamiento" NARROW [] synonym: "Shoot proliferation" RELATED [] xref: TO:TO\:0000013 "resistance to disease by mycoplasma-like organisms" is_a: SOY:0001514 ! Phytoplasma disease resistance traits [Term] id: SOY:0001517 name: Witches broom namespace: soybean_trait def: "Resistance to disease caused by the Witches broom organism." [SoyTO:003, SoyTO:004] comment: Symptoms include abnormal development of buds causing a "witches' broom" appearance. Leaves are reduced in size and pods, if formed, can be curved or flat with few developed seeds. Can resemble Machismo or Bud proliferation. Can be transmitted by the leafhoppers Orosius spp and Neosphrosyne orientalis. synonym: "Phyllody" NARROW [] xref: TO:TO\:0000013 "resistance to disease by mycoplasma-like organisms" is_a: SOY:0001514 ! Phytoplasma disease resistance traits [Term] id: SOY:0001518 name: Reaction to Phoma exigua infection namespace: soybean_trait def: "Reaction of the plant or plant part to Phoma exigua infection." [SoyTO:005] comment: This organism has also been referred to as Ascohyta phaseolorum. Symptoms include isolated leaf spots with dark margins and brown streaks on stems. Pod infection appears as small brown spots to browning of undeveloped pods. Broad host range of beans. Partial resistance found in Phaseolus vulgaris and P. coccinius. synonym: "Ascochyta leaf spot" BROAD [] synonym: "Ascochyta phaseolorum" RELATED [] synonym: "Phoma exigua var. solanicola" EXACT [] synonym: "Phoma solanicola" EXACT [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001519 name: Reaction to Colias eurytheme namespace: soybean_trait def: "Reaction of the plant or plant part to Colias eurytheme larval feeding." [SOYTO:006] synonym: "Alfalfa caterpillar" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001520 name: Reaction to Rhopalosiphum maidis namespace: soybean_trait def: "Reaction of the plant or plant part to feeding by Rhopalosiphum maidis." [SOYTO:006] synonym: "Corn leaf aphid" RELATED [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001696 ! Reaction to Rhapalosiphum species [Term] id: SOY:0001521 name: Reaction to Aphis spraecola namespace: soybean_trait def: "Reaction of the plant or plant part to feeding by Aphis spraecola." [SOYTO:006] synonym: "Spirea aphid" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0006067 "aphid resistance" is_a: SOY:0001605 ! Reaction to Aphis species [Term] id: SOY:0001522 name: Reaction to Myzus persicae namespace: soybean_trait def: "Reaction of the plant or plant part to feeding by Myzus persicae." [SOYTO:006] synonym: "Green peach aphid" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001523 name: Reaction to Rhapalosiphum padi namespace: soybean_trait def: "Reaction of the plant or plant part to feeding by Rhapalosiphum padi." [SOYTO:006] synonym: "Bird-cherry oat aphid" RELATED [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001696 ! Reaction to Rhapalosiphum species [Term] id: SOY:0001524 name: Reaction to Aphis craccivora namespace: soybean_trait def: "Reaction of the plant or plant part to feeding by the aphid Aphis craccivora." [SOYTO:006] synonym: "Bird-cherry oat aphid" NARROW [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0006067 "aphid resistance" is_a: SOY:0001605 ! Reaction to Aphis species [Term] id: SOY:0001525 name: Reaction to Aphis gossypii namespace: soybean_trait def: "Reaction of the plant or plant part to Aphis gossypii feeding." [SOYTO:006] synonym: "cotton aphid" EXACT [] synonym: "melon aphid" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0006067 "aphid resistance" is_a: SOY:0001605 ! Reaction to Aphis species [Term] id: SOY:0001526 name: Reaction to Spodoptera frugiperda namespace: soybean_trait def: "Reaction of the plant or plant part to feeding by Spodoptera frugiperda." [SOYTO:006] synonym: "Fall army worm" EXACT [] synonym: "Fall armyworm" EXACT [] synonym: "Laphygma frugipera" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001697 ! Reaction to Spodoptera species [Term] id: SOY:0001527 name: Reaction to Spodoptera ornithogalli namespace: soybean_trait def: "Reaction of the plant or plant part to feeding by Spodoptera ornithogalli." [SOYTO:006] synonym: "Prodenia ornithogalli" EXACT [] synonym: "yellowstriped armyworm" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001697 ! Reaction to Spodoptera species [Term] id: SOY:0001528 name: Reaction to Diabrotica balteata namespace: soybean_trait def: "Reaction of the plant or plant part to Diabrotica balteata feeding." [SOYTO:006] synonym: "Banded cucumber beetle" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001607 ! Reaction to Diabrotica species [Term] id: SOY:0001529 name: Reaction to Epicauta funebris namespace: soybean_trait def: "Reaction of the plant or plant part to feeding by Epicauta funebris adults." [SOYTO:006] comment: This organism has been referred to as Epicauta pestifera. synonym: "Epicauta pestifera" EXACT [] synonym: "Margined blister beetle" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001530 name: Reaction to Hypera punctata namespace: soybean_trait def: "Reaction of the plant or plant part to Hypera punctata adult feeding." [SOYTO:006] synonym: "Clover leaf weevil" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001531 name: Reaction to Agotis ipsilon namespace: soybean_trait def: "Reaction of the plant or plant part to Agotis ipsilon larval feeding." [SOYTO:006] synonym: "Black cutworm" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001532 name: Reaction to Feltia ducens namespace: soybean_trait def: "Reaction of the plant or plant part to Felta ducens larval feeding." [SOYTO:006] synonym: "Dingy cutworm" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001533 name: Reaction to Peridroma saucia namespace: soybean_trait def: "Reaction of the plant or plant part to Peridroma saucia larval feeding." [SOYTO:006] synonym: "Variegated cutworm" NARROW [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001534 name: Reaction to Dectes texanus ssp. texanus namespace: soybean_trait def: "Reaction of the plant or plant part to Dectes texanus ssp texanus larval feeding." [SOYTO:006] comment: This organism has been referred to as Dectes brevis, Dectes latitarsus and Dectes spinosus. synonym: "Dectes brevis" EXACT [] synonym: "Dectes latitarsus" EXACT [] synonym: "Dectes spinosus" RELATED [] synonym: "Dectes stem borer" RELATED [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000454 "stem borer resistance" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001535 name: Reaction to Halticus bractatus namespace: soybean_trait def: "Reaction of the plant or plant part to Halticus bractatus adult and larval feeding." [SOYTO:006] synonym: "Garden fleahopper" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001536 name: Reaction to Ophiomyia centrosematis namespace: soybean_trait def: "Reaction of the plant or plant part to O. centrosematis larval feeding." [SoyTO:rtn] comment: Resistance is associated with short internode distance prior to V6. Resistance is correlated with sclerenchyma differentiation leading to a physical barrier to the larva. Reduction of pith cavity also contributes to resistance. Vigna radiata (mung bean), V. cylindrica(cowpea) and Phaseolus vulgaris(snap bean) also attacked. synonym: "Beanfly" BROAD [] xref: GO:GO\:0009625 "respose to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001991 ! Reaction to Ophiomyia species created_by: rnelson creation_date: 2010-07-13T04:57:45Z [Term] id: SOY:0001537 name: Reaction to Melanoplus femurrubrum namespace: soybean_trait def: "Reaction of the plant or plant part to Melanoplus femurrubrum adult and larval feeding." [SOYTO:006] synonym: "Red legged grasshopper" EXACT [] synonym: "Redlegged grasshopper" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001695 ! Reaction to Melanoplus species [Term] id: SOY:0001538 name: Reaction to Melanoplus differentialis namespace: soybean_trait def: "Reaction of the plant or plant part to Melanoplus differentialis adult and larval feeding." [SOYTO:006] synonym: "Differential grasshopper" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001695 ! Reaction to Melanoplus species [Term] id: SOY:0001539 name: Reaction to Plathypena scabra namespace: soybean_trait def: "Reaction of the plant or plant part to Plathypen scabra larval feeding." [SOYTO:006] synonym: "Green cloverworm" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001540 name: Reaction to Calomycterus setarius namespace: soybean_trait def: "Reaction of the plant or plant part to Calomycterus setarius adult feeding." [SOYTO:006] synonym: "Imported longhorned weevil" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001541 name: Reaction to Popilliae japnoica namespace: soybean_trait def: "Reaction of the plant or plant part to Popilliae japonica adult feeding." [SOYTO:006] synonym: "Japanese beetle" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001542 name: Reaction to Elasmopalpus lignosellus namespace: soybean_trait def: "Reaction of the plant or plant part to Elasmopalpus lignosellus larval feeding." [SOYTO:006] comment: This organism has been referred to as Pempelia lignosella, Dasypyga carbonella, Elasmpalpus angustellus and Elasmopalpus puer. synonym: "Lesser cornstalk borer" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001543 name: Reaction to Pseudoplusia includens namespace: soybean_trait def: "Reaction of the plant or plant part to Pseudoplusia includens larval feeding." [SOYTO:006] synonym: "Soybean looper" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001544 name: Reaction to Trichoplusia ni namespace: soybean_trait def: "Reaction of the plant or plant part to Trichoplusia ni larval feeding." [SOYTO:006] comment: Resistance to Trichoplusia ni larval feeding. synonym: "Cabbage looper" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001545 name: Reaction to Epilachna varivestis namespace: soybean_trait def: "Reaction of the plant or plant part to Epilachna varivestis adult and larval feeding." [SOYTO:006] synonym: "MBB" EXACT [] synonym: "Mexican bean beetle" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001546 name: Reaction to Vanessa cardui namespace: soybean_trait def: "Reaction of the plant or plant part to Vanessa cardui larval feeding." [SOYTO:006] comment: This organism has been referred to as Cynthia cardui. synonym: "Cynthia cardui" EXACT [] synonym: "Painted lady" EXACT [] synonym: "Thistle caterpillars" RELATED [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001547 name: Reaction to Lygus lineolaris namespace: soybean_trait def: "Reaction of the plant or plant part to Lygus lineolaris adult feeding." [SOYTO:006] synonym: "Tarnished plant bug" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001548 name: Reaction to Empoasca fabae namespace: soybean_trait def: "Reaction of the plant or plant part to Empoasca fabae adult and nymphal feeding." [SOYTO:006] synonym: "Potato leafhopper" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001549 name: Reaction to Delia platura namespace: soybean_trait def: "Reaction of the plant or plant part to Delia platura larval feeding." [SOYTO:006] comment: This organism has been referred to as Hylemia platura and Hylemia cilcrura. synonym: "Hylemia cilcrura" EXACT [] synonym: "Hylemia platura" EXACT [] synonym: "Seedcorn maggot" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001550 name: Reaction to Odontota horni namespace: soybean_trait def: "Reaction of the plant or plant part to Odontota horni adult and larval feeding." [SOYTO:006] synonym: "Soybean leafminer" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001698 ! Reaction to Odontota species [Term] id: SOY:0001551 name: Reaction to Odontota dorsalis namespace: soybean_trait def: "Reaction of the plant or plant part to Odontota dorsalis adult and larval feeding." [SOYTO:006] synonym: "Locust leafminer" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:000961 "reaction to insect damage" is_a: SOY:0001698 ! Reaction to Odontota species [Term] id: SOY:0001552 name: Reaction to Sumitosis rosea namespace: soybean_trait def: "Reaction of the plant or plant part to Sumitrosis rosea adult and larval feeding." [SOYTO:006] synonym: "Leafminer" BROAD [] xref: GO:GO\:0009625 "response to insec" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001553 name: Reaction to Rivellia quadrifasciata namespace: soybean_trait def: "Reaction of the plant or plant part to Rivellia quadriasciata larval feeding." [SOYTO:006] comment: Larvae feed on root nodules. synonym: "Soybean nodule fly" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001554 name: Reaction to Sericothrips variabilis namespace: soybean_trait def: "Reaction of the plant or plant part to Sericothrips variabilis adult and larval feeding." [SOYTO:006] synonym: "Soybean thrips" NARROW [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001555 name: Reaction to Frankliniella tritici namespace: soybean_trait def: "Reaction of the plant or plant part to Frankliniella tritici adult and larval feeding." [SOYTO:006] synonym: "Flower thrips" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001556 name: Reaction to Colaspis louisianae namespace: soybean_trait def: "Reaction of the plant or plant part to Colaspis louisianae adult and larval feeding." [SOYTO:006] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001606 ! Reaction to Colaspis species [Term] id: SOY:0001557 name: Reaction to Colaspis floridana namespace: soybean_trait def: "Reaction of the plant or plant part to Colaspis floridana adult and larval feeding." [SOYTO:006] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001606 ! Reaction to Colaspis species [Term] id: SOY:0001558 name: Reaction to Papaipema nebris namespace: soybean_trait def: "Reaction of the plant or plant part to Papaipema nebris larval feeding." [SOYTO:006] synonym: "Stalk borer" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001559 name: Reaction to Nezara viridula namespace: soybean_trait def: "Reaction of the plant or plant part to Nezara viridula adult and nymphal feeding." [SOYTO:006] synonym: "Southern green stink bug" EXACT [] synonym: "Southern green stinkbug" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001560 name: Reaction to Acrosternum hilare namespace: soybean_trait def: "Reaction of the plant or plant part to Acrosternum hilare adult and nymphal feeding." [SOYTO:006] synonym: "Green stink bug" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000022 "stink bug resistance" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001561 name: Reaction to Euschistus servus namespace: soybean_trait def: "Reaction of the plant or plant part to Euschistus servus adult and nymphal feeding." [SOYTO:006] synonym: "Brown stink bug" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001562 name: Reaction to Spissistilus festinus namespace: soybean_trait def: "Reaction of the plant or plant part to Spissistilus festinus feeding." [SOYTO:006] comment: This organism has been referred to as Membracis fesina and Stictocephala festina. synonym: "Membracis festin" EXACT [] synonym: "Stictocephala festina" EXACT [] synonym: "three cornered alfalfa hopper" EXACT [] synonym: "Threecornered alfalfa hopper" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001563 name: Reaction to Tetranychus urticae namespace: soybean_trait def: "Reaction of the plant or plant part to Tetranychus urticae feeding." [SOYTO:006] synonym: "Tetranychus atlanticus" EXACT [] synonym: "Tetranychus bimaculatus" EXACT [] synonym: "Tetranychus telarius" EXACT [] synonym: "Tetranychus turkestani" EXACT [] synonym: "two spotted spider mite" EXACT [] synonym: "Twospotted spider mite" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001992 ! Reaction to Tetranychus species [Term] id: SOY:0001564 name: Reaction to Tetranychus pacificus namespace: soybean_trait def: "Reaction of the plant or plant part to Tetranychus pacificus feeding." [SOYTO:006] synonym: "Pacific spider mite" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001992 ! Reaction to Tetranychus species [Term] id: SOY:0001565 name: Reaction to Anticarsia gemmatalis namespace: soybean_trait def: "Reaction of the plant or plant part to Anticarsia gemmatalis larval feeding." [SOYTO:006] comment: Common misspelling is Anticarsia gemmatilis. synonym: "Anticarsia gemmatilis" EXACT [] synonym: "Velvetbean caterpillar" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001566 name: Reaction to Bemisia tabaci namespace: soybean_trait def: "Reaction of the plant or plant part to Bremisia tobaci adult and larval feeding." [SOYTO:006] synonym: "Sweetpotato whitefly" EXACT [] synonym: "Whitefly" BROAD [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001567 name: Reaction to Phyllophaga species namespace: soybean_trait def: "Reaction of the plant or plant part to larval feeding by Phyllophaga species." [SOYTO:006] comment: Phyllophaga species include Phyllophaga congrua, P implicita and P rugosa. synonym: "White grub" NARROW [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001568 name: Reaction to Melanotus namespace: soybean_trait def: "Reaction of the plant or plant part to larval feeding by Melanotus species." [SOYTO:006] comment: Melanotus species are in the family Elateridae. The Elateridae are commonly referred to as Click beetles, Elaters, Skipjacks, Snapping beetles or Spring beetles. synonym: "Click beetles" BROAD [] synonym: "Wireworms" NARROW [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001569 name: Reaction to Spilosma virginica namespace: soybean_trait def: "Reaction of the plant or plant part to Spilosma virginica larval feeding." [SOYTO:006] synonym: "Yellow woollybear" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect [Term] id: SOY:0001570 name: Reaction to Alternaria infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Alternaria species." [SoyTO:001] is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001571 name: Reaction to Aristastoma infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Aristastoma species." [SoyTO:001] is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001572 name: Reaction to Ascochyta infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Ascochyta species." [SoyTO:001] is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001573 name: Reaction to Cercospora infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Cercopsora species." [SoyTO:001] is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001574 name: Reaction to Colletotrichum infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Colletotrichum species." [SOY:001] synonym: "anthracnose" BROAD [] is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001575 name: Reaction to Diaporthe infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Diaporthe species." [SoyTO:001] is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001576 name: Reaction to Curvularia infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Curvularia species." [SoyTO:001] is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001577 name: Reaction to Fusarium infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Fusarium species." [SoyTO:001] is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001578 name: Reaction to Mycosphaerella infection namespace: soybean_trait def: "Reaction of the plant or plant part to Mycosphaerella infection." [SoyTO:001] is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001579 name: Reaction to Myrothecium infection namespace: soybean_trait def: "Reaction of the plant or plant part to Myrothecium infection." [SoyTO:001] comment: Range of values could include (R) resistant, (S) sensitive and (I) intermediate. is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001580 name: Reaction to Peronospora infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Peronospora species." [SoyTO:001] is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001581 name: Reaction to Phakopsora infection namespace: soybean_trait def: "Reaction of the plant of plant part to infection by Phakopsora species." [SoyTO:001] is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001582 name: Reaction to Phytophthora infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Phytophthora species." [SoyTO:001] is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001583 name: Reaction to Pleospora infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Pleospora species." [SoyTO:001] is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001584 name: Reaction to Pythium infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Pythium species." [SoyTO:001] is_a: SOY:0001402 ! Fungal Disease Resistance Traits [Term] id: SOY:0001585 name: Reaction to Hoplolaimus namespace: soybean_trait def: "Reaction of the plant or plant part to Hoplolaimus feeding." [SoyTO:001] synonym: "Lance nematode" NARROW [] is_a: SOY:0001404 ! Nematode Resistance [Term] id: SOY:0001586 name: Reaction to Hoplolaimus galeatus namespace: soybean_trait def: "Reaction of the plant or plant part to Hoplolaimus galeatus feeding." [SoyTO:004] synonym: "Lance nematode" NARROW [] xref: GO:GO\:0009624 "response to nematode" xref: TO:TO\:0000384 "nematode damage resistance" is_a: SOY:0001585 ! Reaction to Hoplolaimus [Term] id: SOY:0001587 name: Reaction to Hoplolaimus magnistylus namespace: soybean_trait def: "Reaction of the plant or plant part to Hoplolaimus magnistylus feeding." [SoyTO:004] synonym: "crown-headed lance nematode" EXACT [] synonym: "Lance nematode" NARROW [] xref: GO:GO\:0009624 "response to nematode" xref: TO:TO\:0000384 "nematode damage resistance" is_a: SOY:0001585 ! Reaction to Hoplolaimus [Term] id: SOY:0001588 name: Reaction to Meloidogyne arenaria namespace: soybean_trait def: "Reaction of the plant or plant part to Meloidogyne arenaria feeding." [SoyTO:004] synonym: "Peanut Root-Knot Nematode" EXACT [] synonym: "Root-Knot Nematode" NARROW [] xref: GO:GO\:0009624 "response to nematode" xref: TO:TO\:0000384 "nematode damage resistance" is_a: SOY:0001374 ! Reaction to Meloidogyne [Term] id: SOY:0001589 name: Reaction to Meloidogyne hapla namespace: soybean_trait def: "Reaction of the plant or plant part to Meloidogyne hapla feeding." [SoyTO:004] synonym: "Northern Root-Knot Nematode" EXACT [] synonym: "Root-Knot Nematode" NARROW [] xref: GO:GO\:0009624 "response to nematode" xref: TO:TO\:0000384 "nematode damage resistance" is_a: SOY:0001374 ! Reaction to Meloidogyne [Term] id: SOY:0001590 name: Reaction to Meloidogyne incognita namespace: soybean_trait def: "Reaction of the plant or plant part to Meloidogyne incognita feeding." [SoyTO:004] synonym: "Root-Knot Nematode" NARROW [] synonym: "rootknot nematode" NARROW [] synonym: "Southern Root-Knot Nematode" EXACT [] synonym: "Southern rootknot nematode" EXACT [] xref: GO:GO\:0009624 "response to nematode" xref: TO:TO\:0002704 "meloidogyne incognita resistance" is_a: SOY:0001374 ! Reaction to Meloidogyne [Term] id: SOY:0001591 name: Chromosome Number namespace: soybean_trait def: "2n number of Chromosomes." [SoyTO:001] xref: GO:GO\:0090485 "chromosome number maintenance" is_a: SOY:0001411 ! Miscellaneous Soybean Traits [Term] id: SOY:0001592 name: Reaction to Spodoptera litura namespace: soybean_trait def: "Reaction of the plant or plant part to Spodoptera litura larval feeding." [SoyTO:001, SoyTO:007] comment: QTL symbol is "CCW". synonym: "CCW" EXACT [] synonym: "Common Cutworm" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:000037 "cutworm resistance" is_a: SOY:0001697 ! Reaction to Spodoptera species [Term] id: SOY:0001593 name: Reaction to Pseudomonas syringae pv phaseolicola infectiion namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Pseudomonas syringae pv phaseolicola." [SoyTO:005] comment: This organism infects many bean species including azuki bean (Vigna angularis), lima bean (Phaseolus lunatus), mung bean (Vigna radiata), scarlet runner bean (Phaseolus coccineus) and tepary bean (Phaseolus acultifolius). synonym: "Halo Blight" NARROW [] xref: TO:TO\:0000315 "bacterial disease resistance" is_a: SOY:0001312 ! Reaction to Pseudomonas syringae infection [Term] id: SOY:0001594 name: Seed filling 1 namespace: soybean_trait def: "Number of days between R1 and R8." [SoyTO:rtn] synonym: "Sd fill" RELATED [] is_obsolete: true created_by: rnelson creation_date: 2009-12-03T06:41:24Z [Term] id: SOY:0001595 name: Seed filling 2 namespace: soybean_trait def: "Based on the number of days after planting when 50% of the plants on the plot had reached that particular stage." [SoyTO:rtn] synonym: "Sd fill" RELATED [] is_obsolete: true created_by: rnelson creation_date: 2009-12-03T06:42:07Z [Term] id: SOY:0001596 name: Seed filling period namespace: soybean_trait def: "Period in days when the seed is growing in size and weight. Commonly referred to as the number of days between the beginning of R4 (full pod) and the end of R6 (full seed)." [SOY:001] comment: QTL symbol is "Sd fill". This is synonymous to seed fill. Also expressed as the number of days between stages R1 and R8. synonym: "seed development stage" RELATED [] synonym: "seed fill" NARROW [] synonym: "seed maturation" RELATED [] xref: GO:GO\:0010431 "seed maturation" xref: PO:PO\:0001170 "seed development stage" xref: TO:TO\:0002661 "seed maturation" is_a: SOY:0002190 ! Seed development trait created_by: rnelson creation_date: 2009-12-03T06:38:53Z [Term] id: SOY:0001597 name: Seed width namespace: soybean_trait def: "The width of the seed measured from side to side with the hilum on the top." [SoyTO:rtn] comment: The width is the shorter of the two dimensions. synonym: "seed thickness" NARROW [] xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000149 "seed width" is_a: SOY:0001657 ! Seed Morphology created_by: rnelson creation_date: 2009-12-03T06:30:46Z [Term] id: SOY:0001598 name: Seed height namespace: soybean_trait def: "The height of the seed measured from the hylum to the bottom of the seed." [SoyTO:rtn] xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000184 "seed anatomy and morphology trait" is_a: SOY:0001657 ! Seed Morphology created_by: rnelson creation_date: 2009-12-03T06:28:57Z [Term] id: SOY:0001599 name: Seed length namespace: soybean_trait def: "Length of a seed in its longest dimension with the hilum face up." [SoyTO:rtn] xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000146 "seed length" is_a: SOY:0001657 ! Seed Morphology created_by: rnelson creation_date: 2009-12-03T06:26:14Z [Term] id: SOY:0001600 name: Seed size namespace: soybean_trait def: "The physical size or volume of a seed." [SOY:001] comment: Has been measured as height x length x width. xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000391 "seed size" is_a: SOY:0001657 ! Seed Morphology created_by: rnelson creation_date: 2009-12-03T06:23:04Z [Term] id: SOY:0001601 name: Manganese ion sensitivity namespace: soybean_trait def: "Resistance of a plant or plant part to manganese ion toxicity." [SoyTO:rtn] comment: QTL map symbol is Necro. Synonymous with "Root necrosis resistance". synonym: "Necro (QTL symbol)" EXACT [] synonym: "Root Necrosis Resistance (Trait Name)" RELATED [] xref: TO:TO\:0000073 "manganese sensitivity" is_a: SOY:0001812 ! Inorganic salt sensitivity created_by: rnelson creation_date: 2010-05-21T04:31:58Z [Term] id: SOY:0001602 name: Shoot phosphorus content namespace: soybean_trait def: "The amount of phosphorus in shoots." [SoyTO:rtn] comment: QTL symbol is "Lf Phos". Often measured as percentage of dry weight. xref: PO:PO\:0006341 "primary shoot system" xref: TO:TO\:0020114 "shoot phosphorus content" is_a: SOY:0001833 ! Phosphorus content created_by: rnelson creation_date: 2010-05-24T08:30:28Z [Term] id: SOY:0001603 name: Seed arabinose content namespace: soybean_trait def: "Arabinose content of a plant or plant part." [SoyTO:rtn] synonym: "Ara (symbol)" RELATED [] synonym: "Arabino-pentose" EXACT [] xref: CAS:CAS\:147-81-9 "Arabinose" xref: CHEBI:CHEBI\:33943 "Arabinose" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0006006 "monosaccharide content" is_a: SOY:0001674 ! Saccharide:mono content created_by: rnelson creation_date: 2010-07-14T08:58:59Z [Term] id: SOY:0001604 name: Seed namespace: soybean_structure def: "A reproductive structure, derived from the ovule and enclosing an embryo." [SOY:001] synonym: "seed PO:0009010" RELATED [PO:0009010] is_a: SOY:0001632 ! Seed Structures created_by: rnelson creation_date: 2010-08-17T02:17:35Z [Term] id: SOY:0001605 name: Reaction to Aphis species namespace: soybean_trait def: "Reaction of the plant or plant part to feeding by members of the genus Aphis." [SoyTO:rtn] is_a: SOY:0001371 ! Reaction to insect created_by: rnelson creation_date: 2010-07-14T09:04:39Z [Term] id: SOY:0001606 name: Reaction to Colaspis species namespace: soybean_trait def: "Reaction of the plant or plant part to Colaspis species feeding." [SoyTO:rtn] is_a: SOY:0001371 ! Reaction to insect created_by: rnelson creation_date: 2010-07-14T09:06:58Z [Term] id: SOY:0001607 name: Reaction to Diabrotica species namespace: soybean_trait def: "Reaction of the plant or plant part to feeding by members of the genus Diabrotica." [SoyTO:rtn] is_a: SOY:0001371 ! Reaction to insect created_by: rnelson creation_date: 2010-07-14T09:09:01Z [Term] id: SOY:0001608 name: Pod Maturity Date namespace: soybean_trait def: "Number of days past planting when pods are mature.\n\nUse SOY:0001646 R8 Full maturity" [SOY:001] comment: QTL symbol is "Pod mat". This trait is synonymous with seed pod maturity. Maturity defined as pods have reached their final color. Obsolete, use SOY:0001646 R8 Full maturity synonym: "Maturity date" RELATED [] synonym: "Pod mat (QTL symbol)" RELATED [] synonym: "Reproductive stage R8" EXACT [] synonym: "Seed pod maturity" EXACT [] xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000469 "days to maturity" xref: TO:TO\:0020110 "gynoecium development trait" is_obsolete: true created_by: rnelson creation_date: 2009-12-03T03:39:49Z [Term] id: SOY:0001609 name: Sodium ion sensitivity namespace: soybean_trait def: "Resistance to damage by elevated sodium content of the medium." [SoyTO:rtn] synonym: "Salt reaction" RELATED [] xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0000429 "salt sensitivity" is_a: SOY:0001812 ! Inorganic salt sensitivity created_by: rnelson creation_date: 2009-12-03T03:37:07Z [Term] id: SOY:0001610 name: Seed delta-tocopherol content namespace: soybean_trait def: "The delta-tocopherol content of a seed." [SOY:001] synonym: "Vitamin E" RELATED [] xref: CHEBI:CHEBI\:47772 "Delta tocopherol" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000281 "metabolite content related trait" is_a: SOY:0001384 ! Seed tocopherol content created_by: rexnelson creation_date: 2013-06-28T10:23:49Z [Term] id: SOY:0001611 name: Female sterile namespace: soybean_trait def: "Inability to produce functional female gametophytes." [SoyTO:rtn] synonym: "Female sterility" RELATED [] xref: GO:GO\:0009561 "megagametogenesis" xref: PO:0009062 "gynoecium" xref: TO:TO\:0000358 "female sterility" xref: TO:TO\:0000420 "fertility related trait" is_a: SOY:0001412 ! Soybean Fertility or Sterility Traits created_by: rnelson creation_date: 2009-12-03T03:30:37Z [Term] id: SOY:0001612 name: Male sterile namespace: soybean_trait def: "Inability to produce functional male gametophytes." [SoyTO:rtn] comment: Gene symbol is Ms. synonym: "ms" RELATED [] xref: GO:GO\:0055046 "microgametogenesis" xref: PO:PO\:0009066 "anther" xref: TO:TO\:0000420 "fertility related trait" xref: TO:TO\:0000437 "male sterility" is_a: SOY:0001412 ! Soybean Fertility or Sterility Traits created_by: rnelson creation_date: 2009-12-03T03:11:00Z [Term] id: SOY:0001613 name: Supernodulation namespace: soybean_trait def: "Nodulation up to 40 times more than wild type, produce nodules in presence of otherwise inhibitory levels of nitrate, increased nitrogen fixation ability in presence of nitrate, partially tolerant to soil acidity." [SOY:001] xref: GO:GO\:0044005 "induction by symbiont in host of tumor, nodule, or growth" xref: PO:PO\:0009005 "root" is_a: SOY:0001793 ! Root Nodulation created_by: rnelson creation_date: 2009-12-03T03:01:27Z [Term] id: SOY:0001614 name: Leaflet Width namespace: soybean_trait def: "The width of a fully expanded leaflet." [SoyTO:rtn] comment: Can be measured as the average width in mm of three terminal leaflets from the upper third of plant or the average measurement of six full expanded leaflets at their widest point (randomly chosen). This trait has been incorrectly called "Leaf Width". QTL map symbols are "Lflt width" and "Lf width". xref: PO:PO\:0020049 "leaflet" xref: TO:TO\:0000370 "leaf width" is_a: SOY:0001637 ! Leaflet Morphology created_by: rnelson creation_date: 2009-12-03T02:56:41Z [Term] id: SOY:0001615 name: Pod weight namespace: soybean_trait def: "The fresh weight of a soybean pod." [SOY:001] xref: PO:PO\:0009001 "fruit" xref: TO:TO\:0002746 "fruit weight" is_a: SOY:0001659 ! Pod Morphology created_by: rexnelson creation_date: 2013-06-28T10:39:25Z [Term] id: SOY:0001616 name: Seeds per plant namespace: soybean_trait def: "The number of seeds collected from a single plant." [SOY:001] comment: This measurement can be an average over a number of plants, but expressed as seeds per plant. xref: TO:TO\:0000905 "seed yield" is_a: SOY:0001407 ! Soybean Yield Traits created_by: rexnelson creation_date: 2013-06-28T11:03:47Z [Term] id: SOY:0001617 name: Seed soluble oligosaccharides namespace: soybean_trait def: "Amount of a seed that is composed of soluble oligosaccharides." [SoyTO:rtn] comment: Sd oligosacc (QTL symbol). xref: CHEBI:CHEBI\:50699 "oligosaccharide" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0006003 "oligosaccharide content" is_a: SOY:0001844 ! Saccharide:oligo content created_by: rnelson creation_date: 2009-12-03T02:32:41Z [Term] id: SOY:0001618 name: Twining date namespace: soybean_trait def: "Date when 50% of the plants have begun to twine, expressed as month (1 or 2 digits) and day (2 digits)." [SOY:001] is_a: SOY:0001408 ! Soybean Growth and Development Traits created_by: rnelson creation_date: 2009-12-03T02:31:49Z [Term] id: SOY:0001619 name: Upper pubescence type namespace: soybean_trait def: "Type of pubescence present on the upper side of the leaf, used to discern if there is appressed pubescence." [SoyTO:rtn] xref: PO:PO\:0000282 "trichome" xref: TO:TO\:0000055 "leaf lamina pubescence" is_a: SOY:0001718 ! Pubescence Traits created_by: rnelson creation_date: 2009-12-03T02:30:20Z [Term] id: SOY:0001620 name: Reaction to Heliothis virescens namespace: soybean_trait def: "Reaction of the plant or plant part to damage caused by H. virescens larval feeding." [SOY:001] synonym: "Tobacco budworm" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect created_by: rnelson creation_date: 2011-04-19T09:35:09Z [Term] id: SOY:0001621 name: Seed yield/Plant height namespace: soybean_trait def: "Yield per unit height as kg/ha/cm." [SoyTO:rtn] xref: TO:TO\:0000207 "plant height" xref: TO:TO\:0000396 "grain yield trait" is_a: SOY:0001407 ! Soybean Yield Traits created_by: rnelson creation_date: 2009-12-03T02:24:32Z [Term] id: SOY:0001622 name: Seed yield namespace: soybean_trait def: "Yield of a soybean field in terms of seed weight per unit area at a specified moisture content." [SOY:001] comment: Yield has been expressed in a number of ways, megagrams per hectare (Mg/ha) at 13% seed moisture, Kg ha-1 on a 13% moisture basis. Can be measured as bushels per unit area by defining a bushel as 60 pounds (US) of soybeans. synonym: "Seed yield" RELATED [] xref: TO:TO\:0000396 "grain yield" is_a: SOY:0001407 ! Soybean Yield Traits created_by: rnelson creation_date: 2009-12-03T02:19:37Z [Term] id: SOY:0001623 name: Seed sucrose content namespace: soybean_trait def: "The amount of total seed soluble carbohydrates that is sucrose." [SOY:001] synonym: "1-alpha-D-glucopyranosyl-2-beta-D-fructofuranoside" EXACT [] synonym: "cane sugar" EXACT [] synonym: "CAS 57-50-1" RELATED [] synonym: "saccharose" RELATED [] synonym: "Sucrose (trait)" RELATED [] synonym: "sucrose content" BROAD [] xref: CHEBI:CHEBI\:17992 "sucrose" xref: PO:PO\:0009010 "seed" xref: TO:TO\:000328 "sucrose content" is_a: SOY:0001843 ! Saccharide:Di content created_by: rnelson creation_date: 2009-12-06T03:19:22Z [Term] id: SOY:0001624 name: Main Stem Diameter namespace: soybean_trait def: "The average measurement with calipers midway between the unifoliate and the first trifoliate nodes for three mature plants per plot." [SOY:001] comment: Stem diam (QTL symbol). xref: PO:PO\:0006341 "primary shoot system" xref: TO:TO\:0020083 "stem diameter" is_a: SOY:0001661 ! Main Stem Morphology created_by: rnelson creation_date: 2009-12-06T03:22:58Z [Term] id: SOY:0001625 name: Main Stem Length namespace: soybean_trait def: "The distance from the soil surface to the uppermost node with a pod on the main stem." [SoyTO:rtn] synonym: "Stm lgth (QTL symbol)" RELATED [] xref: PO:PO\:0006341 "primary shoot system" xref: TO:TO\:0000576 "stem length" is_a: SOY:0001661 ! Main Stem Morphology created_by: rnelson creation_date: 2009-12-06T03:26:21Z [Term] id: SOY:0001626 name: Seed stearic acid content namespace: soybean_trait def: "Stearic acid as a percent of total oil extracted from seeds." [SoyTO:rtn] comment: This fatty acid has been referred to as octadecanoic acid and C18:0. CAS number 57-11-4. synonym: "C18:0" EXACT [] synonym: "CAS 57-11-4" RELATED [] synonym: "octadecanoic acid" EXACT [] synonym: "octadecoic acid" EXACT [] xref: CHEBI:CHEBI\:28842 "stearic acid" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0005003 "steric acid content" is_a: SOY:0001668 ! Seed oil content created_by: rnelson creation_date: 2009-12-06T03:31:33Z [Term] id: SOY:0001627 name: Sprout yield namespace: soybean_trait def: "Total fresh weight of soybean sprouts produced from a 50-seed sample divided by dry weight of the 50-seed sample." [SoyTO:rtn] synonym: "germination ratio" BROAD [] synonym: "Sprt yld (QTL symbol)" RELATED [] xref: TO:TO\:0000202 "germination ratio" is_a: SOY:0001407 ! Soybean Yield Traits created_by: rnelson creation_date: 2009-12-06T03:38:12Z [Term] id: SOY:0001628 name: Specific leaflet weight namespace: soybean_trait def: "Leaf dry weight/leaf area, measured as mg/sq cm." [SoyTO:rtn] comment: SLW (QTL symbol). xref: PO:PO\:0020049 "leaflet" is_a: SOY:0001637 ! Leaflet Morphology created_by: rnelson creation_date: 2009-12-06T03:42:40Z [Term] id: SOY:0001629 name: Seed weight namespace: soybean_trait def: "The weight of a soybean seed." [SoyTO:rtn] comment: QTL symbol is Sd wt. This trait has been defined in a number of similar ways. Expressed as milligram seed-1, based on a 200 seed sample, per plot or based on a 100 seed sample. synonym: "Sd wt (QTL symbol)" RELATED [] xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000181 "seed weight" is_a: SOY:0001657 ! Seed Morphology created_by: rnelson creation_date: 2009-12-06T03:55:20Z [Term] id: SOY:0001630 name: Seed Number namespace: soybean_trait def: "Number of seeds per unit area." [SOY:001] comment: QTL symbol is "Sd no". Can be expressed as number of seeds per acer or hectare. Has also been defined as yield/seed weight which also converts to the number of seeds per acer or hectare. synonym: "Sd no (QTL symbol)" RELATED [] xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000420 "fertility related trait" is_a: SOY:0001412 ! Soybean Fertility or Sterility Traits created_by: rnelson creation_date: 2009-12-06T04:46:25Z [Term] id: SOY:0001631 name: Seed nitrogen content namespace: soybean_trait def: "Nitrogen content of a seed." [SoyTO:rtn] xref: PO:PO\:0009010 "seed" xref: TO:TO\:0020093 "nitrogen content" is_a: SOY:0001848 ! Nitrogen content created_by: rnelson creation_date: 2009-12-06T05:02:38Z [Term] id: SOY:0001632 name: Seed Structures namespace: soybean_structure def: "Structures associated with a seed." [SOY:001] is_a: SOY:0000098 ! Soybean Structure Terms created_by: rnelson creation_date: 2010-08-17T02:37:36Z [Term] id: SOY:0001633 name: Hilum namespace: soybean_structure def: "Scar on the ovule produced by the abscision of the funiculus." [SOY:001] is_a: SOY:0001632 ! Seed Structures created_by: rnelson creation_date: 2010-08-17T02:39:24Z [Term] id: SOY:0001634 name: Micropyle namespace: soybean_structure def: "Pore in the seed coat derived from the ovular micropyle." [SOY:001] synonym: "Seed micropyle PO:0006334" EXACT [] xref: PO:0006334 "A pore on the seed coat which is a remnant of the ovular micropyle" is_a: SOY:0001632 ! Seed Structures created_by: rnelson creation_date: 2010-08-17T02:50:23Z [Term] id: SOY:0001635 name: Seed Coat namespace: soybean_structure def: "The outer coat of the seed derived from the inner integument." [SoyGRO:002] synonym: "Covering of the seed PO:0009088" EXACT [] xref: PO:0009088 "Covering of seed derived from ovular - mainly integumentary tissue" is_a: SOY:0001632 ! Seed Structures created_by: rnelson creation_date: 2010-08-17T03:03:20Z [Term] id: SOY:0001636 name: Seed stachyose content namespace: soybean_trait def: "The amount of total seed soluble carbohydrates that is stachyose." [SoyTO:rtn] synonym: "beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1-6)-alpha-D-galactopyranosyl-(1-6)-alpha-D-glucopyranoside " RELATED [] synonym: "O-alpha-D-galactopyranosyl-(1->6)o-alpha-D-galactopyranosyl-(1-6)O-alpha-D-galactopyranosyl-beta-D-fructofuranoside " EXACT [] xref: CAS:CAS\:470-55-3 "stachyose" xref: CHEBI:CHEBI\:17164 "stachyose" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0006003 "oligosaccharide content" is_a: SOY:0001617 ! Seed soluble oligosaccharides created_by: rnelson creation_date: 2009-12-06T05:29:00Z [Term] id: SOY:0001637 name: Leaflet Morphology namespace: soybean_trait def: "Gross morphology of the leaflets." [SOY:001] synonym: "leaf morphology" NARROW [] synonym: "leaves" RELATED [] xref: PO:PO\:0020049 "leaflet" is_a: SOY:0001398 ! Soybean Morphology and Anatomy Traits created_by: rnelson creation_date: 2010-09-23T04:16:06Z [Term] id: SOY:0001638 name: Reproductive stage, field namespace: soybean_trait def: "Based on the number of days after planting when 50% of the plants on the plot had reached reproductive stage (R1)." [SoyTO:rtn] comment: Reprod (QTL symbol). Similar to the trait Flowering date but synonomy can not be determined based on different definitions of time. Similar to First flower (Fflr). Reproductive stage (Reprod) differs from First flower (Fflr) in that Reprod refers to the developmental state of a plot not of an individual plant like Fflr. synonym: "First flower" RELATED [] xref: PO:PO\:0007016 "whole plant flowering stage" xref: TO:TO\:0000344 "Days to flower" is_a: SOY:0001639 ! Flower development traits created_by: rnelson creation_date: 2009-12-07T11:27:10Z [Term] id: SOY:0001639 name: Flower development traits namespace: soybean_trait def: "Traits associated with the development of the flower and its parts." [SoyTO:rtn] xref: GO:0009909 "regulation of flower development" xref: GO:\:GO\:0048437 "floral organ development" xref: GO:GO\:0009908 "flower development" xref: PO:PO\:0007600 "flower organ development stage" is_a: SOY:0001408 ! Soybean Growth and Development Traits created_by: rnelson creation_date: 2009-12-07T11:34:39Z [Term] id: SOY:0001640 name: First flower namespace: soybean_trait def: "Days from planting when there is an open flower on any node on the main stem (R1)." [SoyTO:rtn] comment: QTL symbol is "Fflr". This trait is actually the measure of the vegetative growth phase of the plant ending in the production of the first reproductive structure, the flower. synonym: "Fflr (QTL symbol)" RELATED [] xref: PO:PO\:0007016 "whole plant flowering stage" xref: PO:PO\:0009046 "flower" xref: TO:TO\:0000369 "vegitative growth time" is_a: SOY:0001639 ! Flower development traits created_by: rnelson creation_date: 2009-12-07T12:46:03Z [Term] id: SOY:0001641 name: Seed raffinose content namespace: soybean_trait def: "Raffinose content of a plant or plant part." [SOY:001] comment: Sometimes expressed as a percent of total sugars. synonym: "6G-alpha-D-galactosylsucrose" EXACT [] synonym: "beta-D-Fructofuranosyl-(1-6)-alpha-D-glucopyranoside" EXACT [] xref: CAS:CAS\:512-69-6 "raffinose" xref: CHEBI:CHEBI\:16634 "Raffinose" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0006003 "oligosaccharide content" xref: TO:TO\:0006004 "raffinose content" is_a: SOY:0001617 ! Seed soluble oligosaccharides created_by: rnelson creation_date: 2009-12-07T01:53:47Z [Term] id: SOY:0001642 name: Seed Raphe namespace: soybean_structure def: "Ridge on the seed derived from the funiculus." [SOY:001] synonym: "Seed raphe PO:0006331" EXACT [] xref: PO:0006331 "Seed raphe" is_a: SOY:0001632 ! Seed Structures created_by: rnelson creation_date: 2010-08-17T03:16:00Z [Term] id: SOY:0001643 name: Reaction to Fusarium oxysporum infection namespace: soybean_trait def: "Reaction of the plant or plant part to Fusarium oxysporum infection." [SoyTO:rtn] synonym: "Fusarium blight" RELATED [] synonym: "Fusarium root rot" NARROW [] synonym: "Fusarium wilt" RELATED [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001577 ! Reaction to Fusarium infection created_by: rnelson creation_date: 2010-01-05T03:01:33Z [Term] id: SOY:0001644 name: R3 Beginning pod namespace: soybean_trait def: "Number of days after planting when 50% of plants had presented the first 5 mm pod at one of the top four nodes with a fully expanded leaf." [SOY:001] synonym: "R3" EXACT [] synonym: "Reproductive stage 3" EXACT [] xref: GO:GO\:0010154 "fruit development" xref: PO:PO\:0007029 "fruit formation stage 30 to 50%" xref: TO:TO\:0000653 "seed development trait" is_a: SOY:0001987 ! Pod growth and development traits created_by: rnelson creation_date: 2010-02-24T01:46:38Z [Term] id: SOY:0001645 name: R7 Beginning Maturity namespace: soybean_trait def: "Number of days after planting when 50% of pods had mature pod color." [SOY:001] synonym: "R7" EXACT [] synonym: "Reproductive stage 7" EXACT [] xref: GO:GO\:0010154 "fruit development" xref: PO:PO\:0007632 "seed maturation stage" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000653 "seed development trait" is_a: SOY:0001987 ! Pod growth and development traits created_by: rnelson creation_date: 2010-02-24T02:00:48Z [Term] id: SOY:0001646 name: R8 Full Maturity namespace: soybean_trait def: "Number of days past planting when 95% of pods have reached their mature color." [SOY:001] synonym: "dry seed stage" RELATED [] synonym: "R8" EXACT [] synonym: "Reproductive stage 8" EXACT [] xref: GO:GO\:0010154 "fruit development" xref: PO:PO\:0001040 "dry seed stage" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0002661 "seed maturation" is_a: SOY:0001987 ! Pod growth and development traits created_by: rnelson creation_date: 2010-02-24T02:03:25Z [Term] id: SOY:0001647 name: Brittle bean syndrome namespace: soybean_trait def: "Susceptibility to damage by pendimethalin herbicide (N-(l-ethylpropyl)-3,4-dimethyl-2,6-dinitro-benzenamine)." [SoyTO:rtn] xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000058 "herbicide sensitivity" is_a: SOY:0001406 ! Abiotic Stress Resistance created_by: rnelson creation_date: 2010-02-24T02:07:12Z [Term] id: SOY:0001648 name: Hilar Groove namespace: soybean_structure def: "Narrow cleft in the hilar region of a seed." [SOY:001] is_a: SOY:0001632 ! Seed Structures created_by: rnelson creation_date: 2010-08-17T03:25:34Z [Term] id: SOY:0001649 name: Seed arabinose-galactose content namespace: soybean_trait def: "The amount of seed monosaccharides consisting of arabinose and glucose." [SoyTO:rtn] comment: QTL symbol is "Ara/Gal". synonym: "Ara/Gal (QTL symbol)" RELATED [] xref: CHEBI:CHEBI\:28260 "galactose" xref: CHEBI:CHEBI\:33943 "arabinose" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0006006 "monosaccharide content" is_a: SOY:0001674 ! Saccharide:mono content created_by: rnelson creation_date: 2010-02-24T02:45:37Z [Term] id: SOY:0001650 name: Soybean Development Stages def: "Developmental stages of soybean plant and structure development." [SOY:001] is_a: SOY:0000000 ! Soybean Growth and Trait Ontology V10 revision 1.4 created_by: rnelson creation_date: 2010-08-19T12:46:32Z [Term] id: SOY:0001651 name: Seed beta-conglycinin beta-subunit protein content namespace: soybean_trait def: "Amount of beta-conglycinin beta-subunit in seed protein." [SOY:001] comment: QTL symbol is "beta conglycinin". synonym: "beta conglycinin fraction" RELATED [] xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000710 "globulin protein content" is_a: SOY:0001654 ! Seed beta-conglycinin protein content created_by: rnelson creation_date: 2010-02-24T03:05:14Z [Term] id: SOY:0001652 name: Seed beta-conglycinin alpha-prime subunit protein content namespace: soybean_trait def: "Amount of alpha-prime subunit of beta-conglycinin in seed protein." [SOY:001] comment: QTL symbol is "alpha-prime conglycinin". synonym: "alpha-prime conglycinin" RELATED [] xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000710 "globulin protein content" is_a: SOY:0001654 ! Seed beta-conglycinin protein content created_by: rnelson creation_date: 2010-02-24T03:13:39Z [Term] id: SOY:0001653 name: Cell wall polysaccharide composition namespace: soybean_trait def: "Composition of the polysaccharides composing the cell wall." [SoyTO:rtn] comment: QTL symbol is "CWP". synonym: "CWP" RELATED [] xref: GO:GO\:0044426 "cell wall part" xref: TO:TO\:0006007 "polysaccharide content" is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rnelson creation_date: 2010-02-24T03:23:10Z [Term] id: SOY:0001654 name: Seed beta-conglycinin protein content namespace: soybean_trait def: "Amount of total protein of a seed that is composed of beta-conglycinin." [SoyTO:rtn] comment: QTL symbol is "conglycinin". synonym: "conglycinin fraction" RELATED [] synonym: "globulin" RELATED [] xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000710 "globulin protein content" is_a: SOY:0002050 ! Seed storage protein content created_by: rnelson creation_date: 2010-02-24T03:45:59Z [Term] id: SOY:0001655 name: Reaction to Cercospora sojina infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Cercospora sojia." [SOY:001] comment: Foliar disease - lesions are brown to grey in the center. Minute dark stomata. Stem disease - round lesions brown to grey centers. Pod disease - circular lesions with brown to grey centers. Distributed in North and South America, Europe, Australia and Asia. 20 races have been identified. Resistance genes Rcs1 and Rcs 2 confer resistance to races 1 and 2. Rcs3 provides resistance to races 2 and 5. synonym: "Cercospora leaf spot" NARROW [] synonym: "Frogeye leaf spot" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001573 ! Reaction to Cercospora infection created_by: rnelson creation_date: 2010-02-24T04:12:32Z [Term] id: SOY:0001656 name: Seed fucose content namespace: soybean_trait def: "Fucose content of a seed." [SoyTO:rtn] comment: Fucose (QTL symbol). synonym: "6-deoxygalactose" EXACT [] synonym: "Fuc" RELATED [] xref: CAS:CAS\:7724-73-4 "Galactose, 6-deoxy-" xref: CHEBI:CHEBI\:33984 "fucose" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0006006 "monosaccharide content" is_a: SOY:0001674 ! Saccharide:mono content created_by: rnelson creation_date: 2010-02-25T10:25:14Z [Term] id: SOY:0001657 name: Seed Morphology namespace: soybean_trait def: "Gross appearance of the seed." [SOY:001] xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000184 "seed anatomy and morphology trait" is_a: SOY:0001398 ! Soybean Morphology and Anatomy Traits created_by: rnelson creation_date: 2010-09-23T04:23:36Z [Term] id: SOY:0001658 name: Seed galactose content namespace: soybean_trait def: "Galactose content of seed." [SoyTO:rtn] comment: Galactose (QTL symbol). synonym: "Gal (symbol)" RELATED [] synonym: "galacto-hexose" RELATED [] xref: CHEBI:CHEBI\:28260 "galactose" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000307 "hexose content" xref: TO:TO\:0006006 "monosaccharide content" is_a: SOY:0001674 ! Saccharide:mono content created_by: rnelson creation_date: 2010-02-25T10:27:34Z [Term] id: SOY:0001659 name: Pod Morphology namespace: soybean_trait def: "Gross physical appearance of the pod." [SOY:001] xref: PO:PO\:0009001 "fruit" xref: TO:TO\:0002629 "fruit anatomy and morphology trait" is_a: SOY:0001398 ! Soybean Morphology and Anatomy Traits created_by: rnelson creation_date: 2010-09-23T04:25:13Z [Term] id: SOY:0001660 name: Seed glucose content namespace: soybean_trait def: "Glucose content of a seed." [SoyTO:rtn] synonym: "Glc (symbol)" RELATED [] synonym: "gluco-hexose" EXACT [] xref: CHEBI:CHEBI\:17234 "glucose" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000300 "glucose content" xref: TO:TO\:0006006 "monosaccharide content" is_a: SOY:0001674 ! Saccharide:mono content created_by: rnelson creation_date: 2010-02-25T10:30:17Z [Term] id: SOY:0001661 name: Main Stem Morphology namespace: soybean_trait def: "The gross physical appearance of the stem forming the central axis of the plant." [SOY:001] xref: PO:PO\:0006341 "primary shoot system" is_a: SOY:0001733 ! Shoot Morphology created_by: rnelson creation_date: 2010-09-23T04:28:09Z [Term] id: SOY:0001662 name: Seed glycinin content namespace: soybean_trait def: "The amount of total seed protein that is composed of glycinin ." [SoyTO:rtn] comment: QTL map symbol is "Glycinin". synonym: "globulin" RELATED [] xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000710 "globulin protein content" is_a: SOY:0002050 ! Seed storage protein content created_by: rnelson creation_date: 2010-02-25T10:33:35Z [Term] id: SOY:0001663 name: Main Stem Number namespace: soybean_trait def: "The number of stems forming the central axis of the plant." [SOY:001] xref: PO:PO\:0006341 "primary shoot system" is_a: SOY:0001661 ! Main Stem Morphology created_by: rnelson creation_date: 2010-09-23T04:32:13Z [Term] id: SOY:0001664 name: Seed meal content namespace: soybean_trait def: "Amount of the total weight of a seed remaining after extraction of oils from the tissue." [SoyTO:rtn] xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000281 "metabolite content related trait" is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rnelson creation_date: 2010-03-17T11:53:02Z [Term] id: SOY:0001665 name: Main Stem Architecture namespace: soybean_trait def: "The architecture of the main stem." [SOY:001] comment: Values could include twisted, straight, curved. xref: PO:PO\:00006341 "primary shoot system" xref: TO:TO\:0000739 "shoot axis anatomy and morphology trait" is_a: SOY:0001661 ! Main Stem Morphology created_by: rnelson creation_date: 2010-09-23T04:34:06Z [Term] id: SOY:0001666 name: Lateral Branch Morphology namespace: soybean_trait def: "Gross physical appearance of the lateral branches originating from the main stem or stems." [SOY:001] xref: PO:PO\:0006343 "axillary shoot system" xref: TO:TO\:0000740 "branch anatomy and morphology trait" is_a: SOY:0001733 ! Shoot Morphology created_by: rnelson creation_date: 2010-09-23T04:37:26Z [Term] id: SOY:0001667 name: Isoflavone content namespace: soybean_trait def: "Isoflavone content of a plant or plant part." [SoyTO:rtn] xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0000290 "flavonoid content" is_a: SOY:0001927 ! Flavanone content created_by: rnelson creation_date: 2010-03-17T03:26:50Z [Term] id: SOY:0001668 name: Seed oil content namespace: soybean_trait def: "Oil content of a seed." [SOY:001] xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000604 "fat and essential oil content" is_a: SOY:0001845 ! Oil content created_by: rnelson creation_date: 2010-03-17T03:30:28Z [Term] id: SOY:0001669 name: Lateral Branch Diameter namespace: soybean_trait def: "The diameter of a lateral branch taken at maturity." [SOY:001] xref: PO:PO\:0025073 "branch" xref: TO:TO\:0000077 "shoot system anatomy and morphology trait" is_a: SOY:0001666 ! Lateral Branch Morphology created_by: rnelson creation_date: 2010-09-23T04:44:58Z [Term] id: SOY:0001670 name: Lateral Branch Length namespace: soybean_trait def: "The length of a lateral branch from the originating axilla to the tip of the stem." [SOY:001] xref: PO:PO\:0025073 "branch" xref: TO:TO\:0000077 "shoot system anatomy and morphology trait" is_a: SOY:0001666 ! Lateral Branch Morphology created_by: rnelson creation_date: 2010-09-24T08:53:17Z [Term] id: SOY:0001671 name: Seed oleic acid content namespace: soybean_trait def: "Oleic acid content of a seed." [SOY:001] comment: This fatty acid has been referred to as (9Z)-Octadec-9-enoic acid,(9Z)-Octadecenoic acid, (Z)-Octadec-9-enoic acid, cis-9-Octadecenoic acid, cis-delta 9-Octadecenoic acid and C18:1 cis-9. CAS number 112-80-1. Elaidic acid is the trans isomer of oleic acid. synonym: "18:1 n-9" EXACT [] synonym: "C18:1 n-9" EXACT [] synonym: "Octadec-9-enoic acid" EXACT [] synonym: "Octadecenoic acid" EXACT [] xref: CHEBI:CHEBI\:16196 "oleic acid" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0005002 "oleic acid content" is_a: SOY:0001668 ! Seed oil content created_by: rnelson creation_date: 2010-03-17T03:39:21Z [Term] id: SOY:0001672 name: Lateral Branch Architecture namespace: soybean_trait def: "The gross physical appearance of a lateral shoot." [SOY:001] comment: Possible values include, straight, curved and twisted. xref: PO:PO\:0025073 "branch" xref: TO:TO\:0000654 "shoot development trait" is_a: SOY:0001666 ! Lateral Branch Morphology created_by: rnelson creation_date: 2010-09-24T09:11:53Z [Term] id: SOY:0001673 name: Seed palmitic acid content namespace: soybean_trait def: "Palmitic acid content of a seed." [SoyTO:rtn] comment: This fatty acid has been referred to as hexadecanoic acid, and C16:0. Palmitic acid is the first fatty acid produced during lipogenesis (fatty acid synthesis). CAS number is 57-10-3. synonym: "16:0" EXACT [] synonym: "C16:0" EXACT [] synonym: "CAS 57-10-3" RELATED [] synonym: "cetylic acid" EXACT [] synonym: "hexadecanoic acid" EXACT [] synonym: "hexadecylic acid" EXACT [] synonym: "palmitate" BROAD [] xref: CHEBI:CHEBI\:15756 "palmitic acid" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000491 "fat and essential oil composition related trait." is_a: SOY:0001668 ! Seed oil content created_by: rnelson creation_date: 2010-03-17T03:43:02Z [Term] id: SOY:0001674 name: Saccharide:mono content namespace: soybean_trait def: "Monosaccharide content of a plant or plant part." [SoyTO:rtn] xref: CHEBI:CHEBI\:35381 "monosaccharide" xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0006006 "monosaccharide content" is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rnelson creation_date: 2010-03-17T03:48:38Z [Term] id: SOY:0001675 name: Hypocotyl Morphology namespace: soybean_trait def: "The gross physical appearance of the hypocotyl." [SOY:001] xref: PO:PO\:0025291 "seeling hypocotyl" xref: TO:TO\:0000757 "hypocotyl anatomy and morphology trait" is_a: SOY:0001398 ! Soybean Morphology and Anatomy Traits created_by: rnelson creation_date: 2010-09-24T09:14:46Z [Term] id: SOY:0001676 name: Seed protein content namespace: soybean_trait def: "Protein content of a seed." [SOY:001] comment: Prot (QTL symbol). xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000598 "protein content" is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rnelson creation_date: 2010-03-17T04:03:06Z [Term] id: SOY:0001677 name: Hypocotyl Architecture namespace: soybean_trait def: "The gross morphology of the hypocotyl." [SOY:001] comment: Possible values include: straight, curved and twisted. xref: PO:PO\:0025291 "seedling hypocotyl" xref: TO:TO\:0000769 "seedling hypocotyl anatomy and morphology trait" is_a: SOY:0001675 ! Hypocotyl Morphology created_by: rnelson creation_date: 2010-09-24T09:17:39Z [Term] id: SOY:0001678 name: Secondary Branching namespace: soybean_trait def: "The tendency of a primary lateral branch to form secondary branches." [SOY:001] xref: TO:TO\:0000557 "secondary branch number" is_a: SOY:0001666 ! Lateral Branch Morphology created_by: rnelson creation_date: 2010-09-24T09:21:39Z [Term] id: SOY:0001679 name: Internode length namespace: soybean_trait def: "The distance between nodes on a stem." [SOY:001] xref: PO:PO\:0005005 "shoot internode" xref: TO:TO\:0000145 "internode length" is_a: SOY:0001733 ! Shoot Morphology created_by: rnelson creation_date: 2010-09-24T09:23:27Z [Term] id: SOY:0001680 name: Reaction to Bacillus infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Bacteria of the Bacillus genus." [SoyTO:rtn] is_a: SOY:0001403 ! Bacterial Disease Resistance Traits created_by: rnelson creation_date: 2010-03-22T09:13:40Z [Term] id: SOY:0001681 name: Reaction to Corynebacterium infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Corynebacterium." [SoyTO:rtn] is_a: SOY:0001403 ! Bacterial Disease Resistance Traits created_by: rnelson creation_date: 2010-03-22T10:34:12Z [Term] id: SOY:0001682 name: Reaction to Curtobacterium infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Curtobacterium." [SoyTO:rtn] is_a: SOY:0001403 ! Bacterial Disease Resistance Traits created_by: rnelson creation_date: 2010-03-22T10:36:06Z [Term] id: SOY:0001683 name: Reaction to Pseudomonas infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Pseudomonas species." [SoyTO:rtn] is_a: SOY:0001403 ! Bacterial Disease Resistance Traits created_by: rnelson creation_date: 2010-03-22T10:38:37Z [Term] id: SOY:0001684 name: Reaction to Ralstonia infection namespace: soybean_trait def: "Reaction of the plant or plant part to Ralstonia species infection." [SoyTO:rtn] is_a: SOY:0001403 ! Bacterial Disease Resistance Traits created_by: rnelson creation_date: 2010-03-22T10:47:49Z [Term] id: SOY:0001685 name: Reaction to Xanthomonas infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Xanthomonas species." [SoyTO:rtn] is_a: SOY:0001403 ! Bacterial Disease Resistance Traits created_by: rnelson creation_date: 2010-03-22T10:49:52Z [Term] id: SOY:0001686 name: Reaction to Xanthomonas campestris infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Xanthomonas campestris." [SoyTO:rtn] xref: TO:TO\:0000315 "bacterial disease resistance" is_a: SOY:0001685 ! Reaction to Xanthomonas infection created_by: rnelson creation_date: 2010-03-22T10:52:35Z [Term] id: SOY:0001687 name: Reaction to Sclerotinia infection namespace: soybean_trait def: "Reaction of a plant or plant part to infection by Sclerotinia species." [SoyTO:rtn] is_a: SOY:0001402 ! Fungal Disease Resistance Traits created_by: rnelson creation_date: 2010-04-05T03:11:16Z [Term] id: SOY:0001688 name: Stem Termination Type namespace: soybean_trait def: "Termination type of the axial growth of a soybean plant." [SOY:001] comment: Values are determinative and indeterminative. The main stem growth terminates in a final terminal inflorescence in determinative growth whereas, growth terminates at in a terminal node. synonym: "Determinacy" EXACT [] xref: PO:PO\:0006341 "primary shoot system" xref: TO:TO\:0006017 "meristem identity" is_a: SOY:0001408 ! Soybean Growth and Development Traits created_by: rnelson creation_date: 2010-07-15T02:16:00Z [Term] id: SOY:0001689 name: Seed oil/protein ratio namespace: soybean_trait def: "Ratio of Oil to protein by weight in a seed." [SoyTO:rtn] comment: QTL symbol is "Oil/Prot ". xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000491 "fat and essential oil composition related trait." xref: TO:TO\:0000598 "protein content" is_a: SOY:0001668 ! Seed oil content is_a: SOY:0001676 ! Seed protein content created_by: rnelson creation_date: 2010-05-21T03:56:01Z [Term] id: SOY:0001690 name: 3,4-dichloropropionanilide sensitivity namespace: soybean_trait def: "The resistance to toxicity from 3,4-dichloroprionanilide herbicide." [SoyTO:rtn] comment: 3,4-dichloroproionanilide is also known as DPA, and Propanil. QTL symbol is "CHLORO". synonym: "CHLORO (QTL symbol)" EXACT [] xref: TO:TO\:0000058 "herbicide sensitivity" is_a: SOY:0001954 ! Anilide herbicide sensitivity created_by: rnelson creation_date: 2010-05-24T08:52:16Z [Term] id: SOY:0001691 name: Pectin content namespace: soybean_trait def: "Pectin content of a plant or plant part." [SoyTO:rtn] comment: Genetic map symbol is "Pectin". Can be measured as the sum of uronic acids, galactose, arabinose, rhamnose and fucose. synonym: "Pectin (QTL symbol)" EXACT [] xref: CHEBI:CHEBI\:28057 "amylopectin" xref: GO:GO\:0010021 "amylopectin biosynthetic process" xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0000097 "amylopectin content" is_a: SOY:0001653 ! Cell wall polysaccharide composition created_by: rnelson creation_date: 2010-05-24T11:36:24Z [Term] id: SOY:0001692 name: Seed phytate content namespace: soybean_trait def: "The amount of Phytic acid in a seed." [SoyTO:rtn] comment: Can be measured in absorbance units per miligram tissue at 645 and 882 nm using Chen's reagent. QTL map symbol is "Phytate". synonym: "myo-inositol 1,2,3,4,5,6-hexakisphosphate" EXACT [] synonym: "myo-inositol hexakisphosphate" EXACT [] synonym: "Phytate (QTL symbol)" BROAD [] xref: CHEBI:CHEBI\:17401 "myo-inositol hexakisphosphate" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000281 "metabolite content related trait" is_a: SOY:0001835 ! Seed phosphorus content created_by: rnelson creation_date: 2010-05-24T02:13:22Z [Term] id: SOY:0001693 name: Leaflet trigonelline content namespace: soybean_trait def: "The trigonelline content of a leaflet." [SoyTO:rtn] comment: QTL symbol is "TRG(DW)" and "TRG(FW)". Trigonelline concentration can be expressed in terms of Dry Weight (DW) or Fresh Weight (FW). synonym: "betain nicotinate" EXACT [] synonym: "betaine nicotinate" EXACT [] synonym: "caffearine" EXACT [] synonym: "TRG(DW) (QTL symbol)" EXACT [] synonym: "TRG(FW) (QTL symbol)" EXACT [] xref: CHEBI:CHEBI\:18123 "N-methylnicotinate" xref: PO:PO\:0020049 "leaflet" xref: TO:TO\:0000381 "metabolite content related trait" is_a: SOY:0001841 ! Leaflet alkaloid content created_by: rnelson creation_date: 2010-05-24T03:10:17Z [Term] id: SOY:0001694 name: Photoperiod sensitivity namespace: soybean_trait def: "Reaction of the plant to photoperiod changes." [SOY:001] xref: GO:GO\:0009909 "regulation of flower development" xref: GO:GO\:0010017 "Red or far-red light signalling pathway" xref: GO:GO\:0048573 "photoperiodism, flowering" xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0000229 "photoperiod sensitivity" is_a: SOY:0001408 ! Soybean Growth and Development Traits created_by: rnelson creation_date: 2010-05-24T03:20:45Z [Term] id: SOY:0001695 name: Reaction to Melanoplus species namespace: soybean_trait def: "Reaction of the plant or plant part to feeding by members of the genus Melanoplus." [SoyTO:rtn] is_a: SOY:0001371 ! Reaction to insect created_by: rnelson creation_date: 2010-07-14T09:10:50Z [Term] id: SOY:0001696 name: Reaction to Rhapalosiphum species namespace: soybean_trait def: "Reaction of the plant or plant part to damage caused by feeding of members of the genus Rhapalosiphum." [SoyTO:rtn] is_a: SOY:0001371 ! Reaction to insect created_by: rnelson creation_date: 2010-07-14T09:12:58Z [Term] id: SOY:0001697 name: Reaction to Spodoptera species namespace: soybean_trait def: "Reaction of the plant or plant part to damage caused by Spodoptera species feeding." [SoyTO:rtn] is_a: SOY:0001371 ! Reaction to insect created_by: rnelson creation_date: 2010-07-14T09:16:08Z [Term] id: SOY:0001698 name: Reaction to Odontota species namespace: soybean_trait def: "Reaction of the plant or plant part to damage caused by the feeding of members of the genus Odontota." [SoyTO:rtn] is_a: SOY:0001371 ! Reaction to insect created_by: rnelson creation_date: 2010-07-14T09:18:51Z [Term] id: SOY:0001699 name: Reaction to Rotylenchulus reniformis namespace: soybean_trait def: "Reaction of the plant or plant part to feeding by Rotylenchulus reniformis feeding." [SoyTO:rtn] synonym: "Reniform nematode" NARROW [] xref: GO:GO\:0009624 "response to nematode" xref: TO:TO\:0000384 "nematode damage resistance" is_a: SOY:0001404 ! Nematode Resistance created_by: rnelson creation_date: 2010-07-14T09:39:17Z [Term] id: SOY:0001700 name: Reaction to Cowpea Mosaic Virus Infection (CPMV) namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Cowpea Mosaic Virus." [SoyTO:rtn] comment: Cowpea mosaic virus (CPMV) is a member of the Comoviridae. Viral particles appear as 24 nm isomeric viroids. Symptoms include chlorotic mottled leaflets and other leaflet deformities. CPMV infects soybean and other legumes. This disease has also been referred to as Cowpea Yellow Mosaic Virus (CPYMV). Transmitted by the beetles Ceratoma ruficornis and Diabrotica balteata. synonym: "Cowpea Mosaic Virus" EXACT [] synonym: "Cowpea Yellow Mosaic Virus" RELATED [] synonym: "CPMV" EXACT [] synonym: "CPYMV" EXACT [] xref: GO:GO\:0009615 "response to virus" xref: TO:TO\:0000148 "viral disease resistance" is_a: SOY:0001405 ! Viral Disease Resistance created_by: rnelson creation_date: 2010-07-14T09:48:27Z [Term] id: SOY:0001701 name: Drought Tolerance namespace: soybean_trait def: "Resistance to damage by water restriction." [SoyTO:rtn] xref: TO:TO\:0000276 "drought tolerance" is_a: SOY:0001406 ! Abiotic Stress Resistance created_by: rnelson creation_date: 2010-07-14T11:08:23Z [Term] id: SOY:0001702 name: Pods per plant namespace: soybean_trait def: "The number of pods harvested from a plant." [SOY:001] comment: This trait can be an average of a number of plants and expressed as the number of pods per plant. xref: TO:TO\:0000894 "fruit number" is_a: SOY:0001407 ! Soybean Yield Traits created_by: rexnelson creation_date: 2013-06-28T11:10:34Z [Term] id: SOY:0001703 name: Reaction to Cercospora daizu infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Cercospora diazu." [SoyTO:rtn] comment: Foliar disease - lesions are brown to grey in the center. Minute dark stomata. Stem disease - round lesions brown to grey centers. Pod disease - circular lesions with brown to grey centers. Distributed in North and South America, Europe, Australia and Asia. 20 races have been identified. Resistance genes Rcs1 and Rcs 2 confer resistance to races 1 and 2. Rcs3 provides resistance to races 2 and 5. synonym: "Cercospora leaf spot" NARROW [] synonym: "Frogeye leaf spot" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001573 ! Reaction to Cercospora infection created_by: rnelson creation_date: 2010-07-14T03:35:05Z [Term] id: SOY:0001704 name: Reaction to Cercospora melonis infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Cercospora melonis." [SoyTO:rtn] synonym: "Target spot" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001573 ! Reaction to Cercospora infection created_by: rnelson creation_date: 2010-07-14T03:52:13Z [Term] id: SOY:0001705 name: Reaction to Cercospora vignicola infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Cercospora vignicola." [SoyTO:rtn] synonym: "Target spot" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001573 ! Reaction to Cercospora infection created_by: rnelson creation_date: 2010-07-14T03:54:04Z [Term] id: SOY:0001706 name: Reaction to Glomerella infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Glomerella species." [SoyTO:rtn] is_a: SOY:0001402 ! Fungal Disease Resistance Traits created_by: rnelson creation_date: 2010-07-14T04:22:51Z [Term] id: SOY:0001707 name: Reaction to Fusarium tricinctum infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Fusarium tricinctum." [SoyTO:rtn] comment: One of many Fusarium species that cause fusarium root rot. synonym: "Fusarium root rot" NARROW [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001577 ! Reaction to Fusarium infection created_by: rnelson creation_date: 2010-07-14T04:32:01Z [Term] id: SOY:0001708 name: Maturity group namespace: soybean_trait def: "Maturity group designation of a germplasm." [SOY:001] comment: Maturity group ranges from 000 (extreme north) to X (extreme south). Rankings are based on each germplasms photoperiod sensitivity and thus its flowering date. This limits a germplasms range north to south. is_a: SOY:0001408 ! Soybean Growth and Development Traits created_by: rnelson creation_date: 2010-07-15T09:12:49Z [Term] id: SOY:0001709 name: Seed methionine content namespace: soybean_trait def: "The amount of total seed protein that is composed of methionine." [SoyTO:rtn] xref: CHEBI:CHEBI\:16643 "L-methionine" xref: GO:GO\:0009086 "methionine biosynthetic process" xref: PO:PO\:0009010 "seed" is_a: SOY:0001757 ! Amino Acid Composition created_by: rnelson creation_date: 2010-07-15T09:31:30Z [Term] id: SOY:0001710 name: Metribuzin Sensitivity namespace: soybean_trait def: "Sensitivity to damage by the herbicide Metribuzin." [SoyTO:rtn] comment: This herbicides generic name is 4-amino-6(1,1-dimethyl)-3-(methylthio)-1,2,4- triazin-5(4H). It is also known under the following trade names: Sencor and Luxone. (CAS) Number:21097-64-9. Germplasm Hood is tolerant and Semmes is sensitive. Metribuzin is a triazinone class herbicide. Gene symbols associated with Metribuzin sensitivity are Hm. synonym: "4-amino-[tert-butyl-3(methyithio)-as-trazine-5)4H)one]" EXACT [] synonym: "Hm (gene symbol)" RELATED [] xref: TO:TO\:0000058 "herbicide sensitivity" is_a: SOY:0001952 ! Triazinone herbicide sensitivity created_by: rnelson creation_date: 2010-07-15T09:37:33Z [Term] id: SOY:0001711 name: Bentazone Sensitivity namespace: soybean_trait def: "Sensitivity to damage by the herbicide bentazone." [SoyTO:rtn] comment: Chemical name is 3-(1-methylethyl)-1H-2,1,3-benzothiadiazin-4(3H)-one\n-2,2-dioxide. Trade names are: Basagran and Laddock Postemergence Herbicide. Resistance gene is Hb. synonym: "Basagran" EXACT [] synonym: "Hb (gene symbol)" RELATED [] synonym: "Laddock" EXACT [] xref: TO:TO\:0000058 "herbicide sensitivity" is_a: SOY:0001814 ! Herbicide sensitivity created_by: rnelson creation_date: 2010-07-15T09:53:24Z [Term] id: SOY:0001712 name: Pendimethalin Sensitivity namespace: soybean_trait def: "Sensitivity to damage by the herbicide Pendimethalin." [SOY:001] comment: Trade names include AC 92553, Accotab, Go-Go-San, Herbadox, Penoxalin, Prowl, Sipaxol, Stomp and Way-Up. CAS number 40487-42-1. Pendimethalin is a dinitroaniline class herbicide. synonym: "CAS 40487-42-1" RELATED [] synonym: "Penoxalin" EXACT [] synonym: "Prowl" EXACT [] synonym: "Sipaxol" EXACT [] synonym: "Stomp" EXACT [] xref: TO:TO\:0000058 "hebicide sensitivity" is_a: SOY:0001953 ! Dinitroaniline herbicide sensitivity created_by: rnelson creation_date: 2010-07-15T10:02:50Z [Term] id: SOY:0001713 name: Seed Coat Mottling namespace: soybean_trait def: "Amount of seed coat discolored by mottling." [SoyTO:rtn] comment: Can be judged on a 0 to 10 scale with 0 less than 10% of the seed surface discolored, and 10 greater than 90% of the seed surface discolored. synonym: "Mottling" EXACT [] synonym: "Mottling score" EXACT [] xref: PO:PO\:0009010 "seed" xref: TO:TO\:0020017 "seed coat spots" is_a: SOY:0001409 ! Soybean Quality Traits created_by: rnelson creation_date: 2010-07-15T10:26:22Z [Term] id: SOY:0001714 name: Peroxidase activity namespace: soybean_trait def: "The amount of peroxidase activity present in the plant or plant part." [SoyTO:rtn] comment: Controlled by the Ep locus. xref: EC:1.11.1.7 "Peroxidase" xref: GO:GO\:0004601 "Peroxidase activity" xref: PO:PO\:0000003 "whole plant" is_a: SOY:0001846 ! Enzymatic activity created_by: rnelson creation_date: 2010-07-15T10:32:11Z [Term] id: SOY:0001715 name: Pod color namespace: soybean_trait def: "Color of the mature pod." [SoyTO:rtn] comment: Pod color varies. Colors include black, tan, brown and grey. Gene is L1. synonym: "L1 (gene symbol)" RELATED [] xref: PO:PO\:0009001 "fruit" xref: TO:TO\:0002617 "fruit color" is_a: SOY:0001659 ! Pod Morphology created_by: rnelson creation_date: 2010-07-15T10:36:05Z [Term] id: SOY:0001716 name: Reaction to Phytophthora sojae infection namespace: soybean_trait def: "Reaction of the plant or plant part to Phytophthora sojae infection." [SoyTO:rtn] comment: Many races of P. sojae have been identified (greater than 20). Resistance genes have been identified (Rps1a, Rps1b, Rps1c, Rps 1d, Rps1k, Rps3a, Rps6 and Rps7). Genetic map symbol is PRR. synonym: "phytophthora megasperma var. sojae" RELATED [] synonym: "Phytophthora root rot" EXACT [] synonym: "Phytophthora stem rot" RELATED [] synonym: "PRR" EXACT [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001582 ! Reaction to Phytophthora infection created_by: rnelson creation_date: 2010-07-15T11:08:37Z [Term] id: SOY:0001717 name: Pod length namespace: soybean_trait def: "Length of the pod from the caylx to the pod tip." [SoyTO:rtn] xref: PO:PO\:0009001 "fruit" xref: TO:TO\:0002626 "fruit length" is_a: SOY:0001659 ! Pod Morphology created_by: rnelson creation_date: 2010-07-15T11:19:27Z [Term] id: SOY:0001718 name: Pubescence Traits namespace: soybean_trait def: "Traits involved in the presentation of soybean pubescence (hairs, trichomes)." [SoyTO:rtn] comment: Pubescence is generic term used for soybean trichomes. Pubescence may form on various structures including pods, leaves and stems. synonym: "hair" BROAD [] synonym: "hairs" BROAD [] synonym: "Trichome" RELATED [] xref: PO:PO\:0000282 "trichome" xref: TO:TO\:0000055 "leaf lamina pubescence" is_a: SOY:0001398 ! Soybean Morphology and Anatomy Traits created_by: rnelson creation_date: 2010-07-15T12:27:59Z [Term] id: SOY:0001719 name: Pubescence Color namespace: soybean_trait def: "The color of soybean pubescence." [SoyTO:rtn] comment: Controlled by the T (tawny) and Td loci. Colors include tawny, light tawny, near-grey and grey. xref: PO:PO\:0000282 "trichome" xref: TO:TO\:0000911 "trichome anatomy and morphology trait" is_a: SOY:0001718 ! Pubescence Traits created_by: rnelson creation_date: 2010-07-15T12:29:49Z [Term] id: SOY:0001720 name: Pubescence Form namespace: soybean_trait def: "Physical form of a soybean pubescence shaft." [SoyTO:rtn] comment: Possible values are erect, semi-appressed, glaborus, appressed, normal, pubescent, puberulent, and curly. Genes involved are Pa1, Pa2, P1, P2, and Pc. xref: PO:PO\:0000282 "Trichome" xref: TO:TO\:0000911 "trichome anatomy and morphology trait" is_a: SOY:0001718 ! Pubescence Traits created_by: rnelson creation_date: 2010-07-15T12:38:47Z [Term] id: SOY:0001721 name: Pubescence Density namespace: soybean_trait def: "The density of pubescence growth on a soybean plant part." [SoyTO:rtn] comment: Possible values are normal, dense, sparse and semi-sparse. The absence of trichomes is called glaborous. Genes involved are Pd1,Pd2 and Ps. xref: PO:PO\:0006504 "leaf trichome" xref: TO:TO\:0006066 "leaf trichome density" is_a: SOY:0001718 ! Pubescence Traits created_by: rnelson creation_date: 2010-07-15T12:49:31Z [Term] id: SOY:0001722 name: Pubescence tip type namespace: soybean_trait def: "The form of the tip of a soybean pubescence." [SoyTO:rtn] comment: The locus involved is Pb. Values include, blunt and sharp. xref: PO:PO\:0000282 "trichome" xref: TO:TO\:0000911 "trichome anatomy and morphology trait" is_a: SOY:0001718 ! Pubescence Traits created_by: rnelson creation_date: 2010-07-15T01:20:16Z [Term] id: SOY:0001723 name: Adventitious Leaves namespace: soybean_trait def: "Generation of leaves or leaflets from abnormal locations." [SOY:001] xref: GO:GO\:0048366 "leaf development" xref: PO:PO\:0025034 "leaf" xref: TO:TO\:0000655 "leaf development trait" is_a: SOY:0001983 ! Leaflet growth and development traits created_by: rnelson creation_date: 2010-09-24T09:28:21Z [Term] id: SOY:0001724 name: Specific leaflet area namespace: soybean_trait def: "Specific leaflet area is the area of the leaflet divided by the leaflet dry weight." [SOY:001] xref: PO:PO\:0020049 "leaflet" is_a: SOY:0001637 ! Leaflet Morphology created_by: rexnelson creation_date: 2013-06-28T11:21:45Z [Term] id: SOY:0001725 name: Floral Abscission namespace: soybean_trait def: "The tendency of flowers to prematurely abscise." [SOY:001] comment: Flowers fall off before they senescence. xref: PO:PO\:0000499 "flower abscission zone" xref: PO:PO\:0009046 "flower" is_a: SOY:0001639 ! Flower development traits created_by: rnelson creation_date: 2010-09-24T09:43:20Z [Term] id: SOY:0001726 name: Ovule Abortion namespace: soybean_trait def: "An ovule that does not produce an embryo." [SOY:001] comment: This could occur by failure of fertilization or the ovule is fertilized but the embryo fails to form. This results in a seed compartment with an undeveloped ovule. synonym: "Female sterile" BROAD [] synonym: "female sterility" BROAD [] xref: GO:GO\:0048481 "ovule development" xref: PO:PO\:0009062 "gynoecium" xref: TO:TO\:0000358 "female sterility" xref: TO:TO\:0000420 "fertility related trait" is_a: SOY:0001412 ! Soybean Fertility or Sterility Traits created_by: rnelson creation_date: 2010-09-24T10:14:34Z [Term] id: SOY:0001727 name: Embryo Abortion namespace: soybean_trait def: "An embryo fails to complete development from a fertilized ovule." [SOY:001] comment: This results in a partially formed seed being produced in a seed compartment. synonym: "female sterile" BROAD [] synonym: "female sterility" BROAD [] synonym: "seed abortion" BROAD [] xref: GO:GO\:0009790 "embryo development" xref: TO:TO\:0000416 "embryosac abortion" xref: TO:TO\:0000420 "fertility related trait" is_a: SOY:0001412 ! Soybean Fertility or Sterility Traits created_by: rnelson creation_date: 2010-09-24T10:19:43Z [Term] id: SOY:0001728 name: Germination Time namespace: soybean_trait def: "Time from planting until the hypocotyl emerges from the substrate." [SOY:001] xref: GO:GO\:0009845 "seed germination" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0006061 "Days to germinate" is_a: SOY:0001408 ! Soybean Growth and Development Traits created_by: rnelson creation_date: 2010-09-24T10:25:27Z [Term] id: SOY:0001729 name: Podless namespace: soybean_trait def: "Flowers form but produce no pods." [SOY:001] comment: This could be due to fertility or to ovule/gynecium development deficits. xref: GO:GO\:0010154 "fruit development" xref: PO:PO\:0009001 "fruit" xref: TO:TO\:0000420 "fertility related trait" is_a: SOY:0001412 ! Soybean Fertility or Sterility Traits created_by: rnelson creation_date: 2010-09-24T10:29:37Z [Term] id: SOY:0001730 name: Specific leaflet nitrogen content namespace: soybean_trait def: "Specific leaflet nitrogen content is the nitrogen content of a leaflet divided by the area of the leaflet." [SOY:001] comment: This measurement can be averaged over a number of leaflets sampled. synonym: "specific leaflet nitrogen content" BROAD [] xref: PO:PO\:0020049 "leaflet" xref: TO:TO\:0020093 "nitrogen content" is_a: SOY:0001848 ! Nitrogen content relationship: measured_in SOY:0001995 ! Leaflet created_by: rexnelson creation_date: 2013-06-28T11:37:03Z [Term] id: SOY:0001731 name: Net photosynthetic rate namespace: soybean_trait def: "The difference between the gross photosynthesis rate and the respiration rate." [SOY:001] comment: Often measured on a Li-Cor portable photosynthesis system in situ in the field. synonym: "photosynthesis" RELATED [] xref: GO:GO\:0009507 "chloroplast" xref: GO:GO\:0010109 "regulation of photosynthesis" xref: TO:TO\:0001027 "net photosynthetic rate" is_a: SOY:0001874 ! Photosynthesis created_by: rexnelson creation_date: 2013-06-28T11:59:07Z [Term] id: SOY:0001732 name: Root Morphology namespace: soybean_trait def: "The gross appearance of the root system." [SOY:001] xref: PO:PO\:0009005 "root" xref: TO:TO\:0000043 "root anatomy and morphology trait" is_a: SOY:0001398 ! Soybean Morphology and Anatomy Traits created_by: rnelson creation_date: 2010-09-24T01:23:02Z [Term] id: SOY:0001733 name: Shoot Morphology namespace: soybean_trait def: "The gross physical appearance of shoot morphology." [SOY:001] xref: PO:PO\:0009006 "shoot system" xref: TO:TO\:0000739 "shoot axis anatomy and morphology trait" is_a: SOY:0001398 ! Soybean Morphology and Anatomy Traits created_by: rnelson creation_date: 2010-09-24T01:24:59Z [Term] id: SOY:0001734 name: Primary Root Morphology namespace: soybean_trait def: "The gross appearance of the main or tap root." [SOY:001] xref: PO:PO\:0020127 "primary root" xref: TO:TO\:0000043 "root anatomy and morphology trait" is_a: SOY:0001732 ! Root Morphology created_by: rnelson creation_date: 2010-09-24T01:26:47Z [Term] id: SOY:0001735 name: Lateral Root Morphology namespace: soybean_trait def: "The gross physical appearance of the lateral or secondary root structure." [SOY:001] xref: TO:TO\:0000043 "root anatomy and morphology trait" is_a: SOY:0001732 ! Root Morphology created_by: rnelson creation_date: 2010-09-24T01:28:20Z [Term] id: SOY:0001736 name: Lateral root length namespace: soybean_trait def: "The length of a lateral root. Measured from the tip to the root axila." [SOY:001] xref: PO:PO\:0020121 "lateral root" xref: TO:TO\:0001012 "lateral root length" is_a: SOY:0001735 ! Lateral Root Morphology created_by: rnelson creation_date: 2010-09-24T01:33:55Z [Term] id: SOY:0001737 name: Lateral root size namespace: soybean_trait def: "The diameter of a lateral root measured at the proximal end of the root." [SOY:001] xref: PO:PO\:0020121 "lateral root" xref: TO:TO\:0000306 "root thickness" is_a: SOY:0001735 ! Lateral Root Morphology created_by: rnelson creation_date: 2010-09-24T01:36:07Z [Term] id: SOY:0001738 name: Lateral root shape namespace: soybean_trait def: "The shape of the lateral root." [SOY:001] comment: Possible values include, round, flat, straight, curved. xref: PO:PO\:0020121 "lateral root" xref: TO:TO\:0002710 "root shape" is_a: SOY:0001735 ! Lateral Root Morphology created_by: rnelson creation_date: 2010-09-24T01:37:51Z [Term] id: SOY:0001739 name: Lateral root number namespace: soybean_trait def: "The number of lateral roots originating from the primary root." [SOY:001] comment: This can be expressed as the number of lateral roots per main root or the number of lateral roots per unit area of the main root at a specified level of the root. xref: PO:PO\:0020121 "lateral root" xref: TO:TO\:0001013 "lateral root number" is_a: SOY:0001735 ! Lateral Root Morphology created_by: rnelson creation_date: 2010-09-24T01:39:18Z [Term] id: SOY:0001740 name: Flower Number namespace: soybean_trait def: "The total number of flowers produced by the plant." [SOY:001] xref: PO:PO\:0009046 "flower" xref: TO:TO\:0002736 "flower number" is_a: SOY:0001985 ! Flower morphology and anatomy traits created_by: rnelson creation_date: 2011-09-27T01:58:05Z [Term] id: SOY:0001741 name: Pod Number namespace: soybean_trait def: "The total number of pods produced by a plant." [SOY:001] comment: Pod num (QTL symbol). xref: PO:PO\:0009001 "fruit" xref: TO:TO\:0000371 "yield trait" is_a: SOY:0001412 ! Soybean Fertility or Sterility Traits created_by: rnelson creation_date: 2011-09-27T01:59:55Z [Term] id: SOY:0001742 name: Lateral roots absent namespace: soybean_trait def: "Absence of formation of lateral roots." [SOY:001] xref: PO:PO\:0020121 "lateral root" xref: TO:TO\:0000198 "rootless" is_a: SOY:0001735 ! Lateral Root Morphology created_by: rnelson creation_date: 2010-09-24T02:02:50Z [Term] id: SOY:0001743 name: Root Weight namespace: soybean_trait def: "Dry weight of the entire root system of a plant." [SOY:001] xref: PO:PO\:0025025 "root system" xref: TO:TO\:0000078 "root dry weight" is_a: SOY:0001732 ! Root Morphology created_by: rnelson creation_date: 2011-09-27T02:06:39Z [Term] id: SOY:0001744 name: Plant weight namespace: soybean_trait def: "Dry weight of the plants shoots and roots." [SOY:001] xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0000352 "plant dry weight" is_a: SOY:0001399 ! Miscellaneous Soybean Morphological Traits created_by: rnelson creation_date: 2011-09-27T02:08:07Z [Term] id: SOY:0001745 name: Root Surface Area namespace: soybean_trait def: "The total surface area of the plant root system." [SOY:001] xref: PO:PO\:0025025 "root system" is_a: SOY:0001732 ! Root Morphology created_by: rnelson creation_date: 2011-09-27T02:16:47Z [Term] id: SOY:0001746 name: Shoot weight namespace: soybean_trait def: "The dry weight of the plant shoots." [SOY:001] xref: PO:PO\:0009006 "shoot system" xref: TO:TO\:0000568 "shoot weight" is_a: SOY:0001733 ! Shoot Morphology created_by: rnelson creation_date: 2011-09-27T02:20:04Z [Term] id: SOY:0001747 name: Primary Root Size namespace: soybean_trait def: "The diameter of the main root." [SOY:001] comment: Measured at a stipulated level of the root. xref: PO:PO\:0020127 "primary root" xref: TO:TO\:0000306 "root thickness" is_a: SOY:0001734 ! Primary Root Morphology created_by: rnelson creation_date: 2010-09-24T02:39:36Z [Term] id: SOY:0001748 name: Primary Root Shape namespace: soybean_trait def: "The shape of the primary root." [SOY:001] xref: PO:PO\:0020127 "primary root" xref: TO:TO\:0002710 "root shape" is_a: SOY:0001734 ! Primary Root Morphology created_by: rnelson creation_date: 2010-09-24T02:43:33Z [Term] id: SOY:0001749 name: Primary Root Length namespace: soybean_trait def: "The length of the primary root." [SOY:001] comment: Measured at a specified vegetative or reproductive stage. xref: PO:PO\:0020127 "primary root" xref: TO:TO\:0000227 "root length" is_a: SOY:0001734 ! Primary Root Morphology created_by: rnelson creation_date: 2010-09-24T02:44:47Z [Term] id: SOY:0001750 name: Root dry weight to shoot dry weight ratio namespace: soybean_trait def: "Dry weight of the roots divided by the dry weight of the shoots of a plant." [SOY:001] xref: PO:PO\:0009006 "shoot sytem" xref: PO:PO\:0025025 "root system" xref: TO:TO\:0000078 "root dry weight" xref: TO:TO\:0000552 "shoot dry weight" is_a: SOY:0001732 ! Root Morphology is_a: SOY:0001733 ! Shoot Morphology created_by: rnelson creation_date: 2011-09-27T02:27:33Z [Term] id: SOY:0001751 name: Drought Susceptibility Index namespace: soybean_trait def: "Defined as 1 - (Yds/Yns)/DII." [SOY:001] comment: Where Yds is seed yield in drought stress, Yns is seed yield in non-stressed conditions. DII is (1-Xds/Xns) where Xds is the yield mean of all drought stressed genotypes, Xns is the mean yield of all genotypes in non-stressed conditions. xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0000155 "drought susceptibility index" is_a: SOY:0001399 ! Miscellaneous Soybean Morphological Traits created_by: rnelson creation_date: 2011-09-27T02:30:29Z [Term] id: SOY:0001752 name: Node Number namespace: soybean_trait def: "The number of nodes on the main stem." [SOY:001] xref: PO:PO\:0005004 "shoot node" xref: TO:TO\:0000634 "node number" is_a: SOY:0001399 ! Miscellaneous Soybean Morphological Traits created_by: rnelson creation_date: 2011-09-27T02:43:54Z [Term] id: SOY:0001753 name: Pods Per Node namespace: soybean_trait def: "The average number of pods per node of a plant." [SOY:001] comment: Pod/node (QTL symbol). xref: PO:PO\:0009001 "fruit" xref: TO:TO\:0000371 "yield trait" is_a: SOY:0001412 ! Soybean Fertility or Sterility Traits created_by: rnelson creation_date: 2011-09-27T02:47:18Z [Term] id: SOY:0001754 name: pH Sensitivity namespace: soybean_trait def: "Reaction of the plant to extremes in pH." [SOY:001] xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0000254 "growth media pH sensitivity" is_a: SOY:0001406 ! Abiotic Stress Resistance created_by: rnelson creation_date: 2011-09-27T03:33:42Z [Term] id: SOY:0001755 name: Reaction to Acidity namespace: soybean_trait def: "The reaction of the plant to low pH growth conditions." [SOY:001] xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0000178 "acid soil sensitivity" is_a: SOY:0001754 ! pH Sensitivity created_by: rnelson creation_date: 2011-09-27T03:34:53Z [Term] id: SOY:0001756 name: Reaction to Alkalinity namespace: soybean_trait def: "Reaction of the plant to alkaline growth conditions." [SOY:001] xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0000003 "alkali soil sensitivity" is_a: SOY:0001754 ! pH Sensitivity created_by: rnelson creation_date: 2011-09-27T03:36:05Z [Term] id: SOY:0001757 name: Amino Acid Composition namespace: soybean_trait def: "The amino acid composition of proteins extracted from a plant or plant part." [SOY:001] xref: GO:GO\:0006520 "cellular amino acid metabolic process" xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0002673 "amino acid content" is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rnelson creation_date: 2011-09-27T03:38:19Z [Term] id: SOY:0001758 name: Seed alanine content namespace: soybean_trait def: "The amount of total seed protein that is composed of alanine." [SOY:001] xref: CHEBI:CHEBI\:16977 "L-alanine" xref: GO:GO\:0006523 "alanine biosynthetic process" xref: PO:PO\:0009010 "seed" is_a: SOY:0001757 ! Amino Acid Composition created_by: rnelson creation_date: 2011-09-27T03:43:01Z [Term] id: SOY:0001759 name: Seed valine content namespace: soybean_trait def: "The amount of total seed protein that is composed of valine." [SOY:001] xref: CHEBI:CHEBI\:16414 "L-valine" xref: GO:GO\:0009099 "valine biosynthetic process" xref: PO:PO\:0009010 "seed" is_a: SOY:0001757 ! Amino Acid Composition created_by: rnelson creation_date: 2011-09-27T03:44:37Z [Term] id: SOY:0001760 name: Seed lysine content namespace: soybean_trait def: "The amount of total seed protein that is composed of lysine." [SOY:001] xref: CHEBI:CHEBI\:18019 "L-lysine" xref: GO:GO\:0009085 "lysine biosynthetic process" xref: PO:PO\:0009010 "seed" is_a: SOY:0001757 ! Amino Acid Composition created_by: rnelson creation_date: 2011-09-27T03:46:16Z [Term] id: SOY:0001761 name: Seed proline content namespace: soybean_trait def: "The amount of total seed protein that is composed of proline." [SOY:001] xref: CHEBI:CHEBI\:17203 "L-proline" xref: GO:GO\:0006561 "proline biosynthetic process" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0006002 "proline content" is_a: SOY:0001757 ! Amino Acid Composition created_by: rnelson creation_date: 2011-09-27T03:47:10Z [Term] id: SOY:0001762 name: Seed histidine content namespace: soybean_trait def: "The amount of total seed protein that is composed of histidine." [SOY:001] xref: CHEBI:CHEBI\:15971 "L-histidine" xref: GO:GO\:0000105 "histidine biosynthetic process" xref: PO:PO\:0009010 "seed" is_a: SOY:0001757 ! Amino Acid Composition created_by: rnelson creation_date: 2011-09-27T03:48:17Z [Term] id: SOY:0001763 name: Seed glutamine content namespace: soybean_trait def: "The amount of total seed protein that is composed of glutamine." [SOY:001] xref: CHEBI:CHEBI\:18050 "L-glutamine" xref: GO:GO\:0006542 "glutamine biosynthetic process" xref: PO:PO\:0009010 "seed" is_a: SOY:0001757 ! Amino Acid Composition created_by: rnelson creation_date: 2011-09-27T03:49:19Z [Term] id: SOY:0001764 name: Seed arginine content namespace: soybean_trait def: "The amount of total seed protein that is composed of arginine." [SOY:001] xref: CHEBI:CHEBI\:16467 "L-arginine" xref: GO:GO\:0006526 "arginine biosynthetic process" xref: PO:PO\:0009010 "seed" is_a: SOY:0001757 ! Amino Acid Composition created_by: rnelson creation_date: 2011-09-27T03:50:51Z [Term] id: SOY:0001765 name: Seed glycine content namespace: soybean_trait def: "The amount of total seed protein that is composed of glycine." [SOY:001] xref: CHEBI:CHEBI\:15428 "glycine" xref: GO:GO\:0006545 "glycine biosynthetic process" xref: PO:PO\:0009010 "seed" is_a: SOY:0001757 ! Amino Acid Composition created_by: rnelson creation_date: 2011-09-27T03:52:36Z [Term] id: SOY:0001766 name: Seed asparagine content namespace: soybean_trait def: "The amount of total seed protein that is composed of asparagine." [SOY:001] xref: CHEBI:CHEBI\:17196 "L-asparagine" xref: GO:GO\:0006529 "asparagine biosynthetic process" xref: PO:PO\:0009010 "seed" is_a: SOY:0001757 ! Amino Acid Composition created_by: rnelson creation_date: 2011-09-27T03:53:31Z [Term] id: SOY:0001767 name: Seed threonine content namespace: soybean_trait def: "The amount of total seed protein that is composed of threonine." [SOY:001] xref: CHEBI:CHEBI\:16857 "L-threonine" xref: GO:GO\:0009088 "threonine biosynthetic process" xref: PO:PO\:0009010 "seed" is_a: SOY:0001757 ! Amino Acid Composition created_by: rnelson creation_date: 2011-09-27T03:54:52Z [Term] id: SOY:0001768 name: Calcium content namespace: soybean_trait def: "Calcium content of a plant or plant part." [SOY:001] comment: Often expressed as a concentration (mg Ca++/mg tissue). xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0006047 "calcium concentration" is_a: SOY:0001842 ! Mineral content created_by: rexnelson creation_date: 2013-06-28T12:18:06Z [Term] id: SOY:0001769 name: Seed tryptophan content namespace: soybean_trait def: "The amount of total seed protein that is composed of tryptophan." [SOY:001] xref: CHEBI:CHEBI\:16828 "L-tryptophan" xref: GO:GO\:0000162 "tryptophan biosynthetic process" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0002674 "tryptophan content" is_a: SOY:0001757 ! Amino Acid Composition created_by: rnelson creation_date: 2011-09-27T03:55:50Z [Term] id: SOY:0001770 name: Seed serine content namespace: soybean_trait def: "The amount of total seed protein that is composed of serine." [SOY:001] xref: CHEBI:CHEBI\:17115 "L-serine" xref: GO:GO\:0006564 "L-serine biosynthetic process" xref: PO:PO\:0009010 "seed" is_a: SOY:0001757 ! Amino Acid Composition created_by: rnelson creation_date: 2011-09-27T03:57:00Z [Term] id: SOY:0001771 name: Seed phenylalanine content namespace: soybean_trait def: "The amount of total seed protein that is composed of phenylalanine." [SOY:001] xref: CHEBI:CHEBI\:17295 "L-phenylalanine" xref: GO:GO\:0009094 "L-phenylalanine biosynthetic process" xref: PO:PO\:0009010 "seed" is_a: SOY:0001757 ! Amino Acid Composition created_by: rnelson creation_date: 2011-09-27T03:58:00Z [Term] id: SOY:0001772 name: Seed tyrosine content namespace: soybean_trait def: "The amount of total seed protein that is composed of tyrosine." [SOY:001] xref: CHEBI:CHEBI\:17895 "L-tyrosine" xref: GO:O\:0006571 "tyrosine biosynthetic process" xref: PO:PO\:0009010 "seed" is_a: SOY:0001757 ! Amino Acid Composition created_by: rnelson creation_date: 2011-09-27T03:59:14Z [Term] id: SOY:0001773 name: Petiole Morphology namespace: soybean_trait def: "Gross physical appearance of the petiole." [SOY:001] xref: PO:PO\:0020038 "petiole" xref: TO:TO\:0000765 "petiole anatomy and morphology trait" is_a: SOY:0001398 ! Soybean Morphology and Anatomy Traits created_by: rnelson creation_date: 2010-09-27T11:01:46Z [Term] id: SOY:0001774 name: Petiole length namespace: soybean_trait def: "The length of the petiole." [SOY:001] xref: PO:PO\:0020038 "petiole" xref: TO:TO\:0000766 "petiole length" is_a: SOY:0001773 ! Petiole Morphology created_by: rnelson creation_date: 2010-09-27T11:02:37Z [Term] id: SOY:0001775 name: Petiole Shape namespace: soybean_trait def: "The shape of the petiole." [SOY:001] xref: PO:PO\:0020038 "petiole" xref: TO:TO\:0000767 "petiole shape" is_a: SOY:0001773 ! Petiole Morphology created_by: rnelson creation_date: 2010-09-27T11:03:00Z [Term] id: SOY:0001776 name: Petiole Size namespace: soybean_trait def: "Diameter of the petiole measured at the mid point of the petiole." [SOY:001] xref: PO:PO\:0020038 "petiole" xref: TO:TO\:0000767 "petiole size" is_a: SOY:0001773 ! Petiole Morphology created_by: rnelson creation_date: 2010-09-27T11:03:29Z [Term] id: SOY:0001777 name: Petiolule Morphology namespace: soybean_trait def: "Gross physical appearance of the petiolule." [SOY:001] xref: PO:PO\:0020050 "petiolule" xref: TO:TO\:0000884 "petiolule anatomy and morphology trait" is_a: SOY:0001773 ! Petiole Morphology created_by: rnelson creation_date: 2010-09-27T11:06:40Z [Term] id: SOY:0001778 name: Petiolule Length namespace: soybean_trait def: "The length of the petiolule." [SOY:001] xref: PO:PO\:0020050 "petiolule" xref: TO:TO\:0000887 "petiolule length" is_a: SOY:0001777 ! Petiolule Morphology created_by: rnelson creation_date: 2010-09-27T11:07:32Z [Term] id: SOY:0001779 name: Petiolule Shape namespace: soybean_trait def: "The shape of the petiolule." [SOY:001] xref: PO:PO\:0020050 "petiolule" xref: TO:TO\:0000886 "petiolule shape" is_a: SOY:0001777 ! Petiolule Morphology created_by: rnelson creation_date: 2010-09-27T11:07:52Z [Term] id: SOY:0001780 name: Petiolule Size namespace: soybean_trait def: "Diameter of the petiolule measured at its mid-point." [SOY:001] xref: PO:PO\:0000884 "petiolule anatomy and morphology trait" xref: PO:PO\:0020050 "petiolule" is_a: SOY:0001777 ! Petiolule Morphology created_by: rnelson creation_date: 2010-09-27T11:08:15Z [Term] id: SOY:0001781 name: Determinant stem namespace: soybean_trait def: "Synchronous conversion of stem apices and axillary nodes to floral meristems. Determinant stems have a distinct terminal raceme." [SOY:001] xref: PO:PO\:0006341 "primary shoot sytem" xref: TO:TO\:0006017 "meristem identity" is_a: SOY:0001688 ! Stem Termination Type created_by: rnelson creation_date: 2010-09-27T11:10:37Z [Term] id: SOY:0001782 name: Indeterminant stem namespace: soybean_trait def: "Asynchronous conversion of stem apices and axillary nodes to floral meristems. Indeterminant stems can have terminal racemes that are associated with very short internode distances superficially resembling a determinant terminal raceme." [SoyGRO:002] xref: PO:PO\:0006341 "primary shoot system" xref: TO:TO\:0006017 "meristem identity" is_a: SOY:0001688 ! Stem Termination Type created_by: rnelson creation_date: 2010-09-27T11:10:58Z [Term] id: SOY:0001783 name: Seed leucine content namespace: soybean_trait def: "The amount of total seed protein that is composed of leucine." [SOY:001] xref: CHEBI:CHEBI\:15603 "L-leucine" xref: GO:GO\:0009098 "leucine biosynthetic process" xref: PO:PO\:0009010 "seed" is_a: SOY:0001757 ! Amino Acid Composition created_by: rnelson creation_date: 2011-09-27T04:00:49Z [Term] id: SOY:0001784 name: Seed isoleucine content namespace: soybean_trait def: "The amount of total seed protein that is composed of isoleucine." [SOY:001] xref: CHEBI:CHEBI\:17191 "L-isoleucine" xref: GO:GO\:0009097 "isoleucine biosynthetic process" xref: PO:PO\:0009010 "seed" is_a: SOY:0001757 ! Amino Acid Composition created_by: rnelson creation_date: 2011-09-27T04:01:42Z [Term] id: SOY:0001785 name: Seed aspartic acid content namespace: soybean_trait def: "The amount of total seed protein that is composed of aspartic acid." [SOY:001] xref: CHEBI:CHEBI\:17053 "l-aspartic acid" xref: PO:PO\:0009010 "seed" is_a: SOY:0001757 ! Amino Acid Composition created_by: rnelson creation_date: 2011-09-27T04:07:20Z [Term] id: SOY:0001786 name: Seed glutamic acid content namespace: soybean_trait def: "The amount of total seed protein that is composed of glutamic acid." [SOY:001] xref: CHEBI:CHEBI\:16015 "L-glutamic acid" xref: GO:GO\:0006537 "glutamate biosynthetic process" xref: PO:PO\:0009010 "seed" is_a: SOY:0001757 ! Amino Acid Composition created_by: rnelson creation_date: 2011-09-27T04:08:09Z [Term] id: SOY:0001787 name: Seed calcium content namespace: soybean_trait def: "The content of a seed." [SOY:001] comment: Often expressed as a concentration (mg Ca++/mg tissue). xref: PO:PO\:0009010 "seed" xref: TO:TO\:0006047 "calcium content" is_a: SOY:0001768 ! Calcium content created_by: rexnelson creation_date: 2013-06-28T12:18:59Z [Term] id: SOY:0001788 name: Reaction to Maruca vitrata namespace: soybean_trait def: "Reaction of the plant or plant part to feeding by Maruca vitrata larvae." [SOY:001] synonym: "Soybean pod borer" EXACT [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0000961 "reaction to insect damage" is_a: SOY:0001371 ! Reaction to insect created_by: rexnelson creation_date: 2013-06-28T12:35:37Z [Term] id: SOY:0001789 name: Stem strength namespace: soybean_trait def: "Measured as the force needed to push the main stem 45 degrees off vertical." [SOY:001] xref: PO:PO\:0006341 "primary shoot system" xref: TO:TO\:0000051 "stem strength" is_a: SOY:0001399 ! Miscellaneous Soybean Morphological Traits created_by: rnelson creation_date: 2011-10-06T12:39:39Z [Term] id: SOY:0001790 name: Seed oil plus protein content namespace: soybean_trait def: "The amount of total seed weight of a seed that is composed of oils and protein." [SOY:001] comment: This is a compound trait in which the amount of oil and protein are determined separately as weight and then added together. xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000491 "fat and essential oil composition related trait." xref: TO:TO\:0000589 "protein content" is_a: SOY:0001668 ! Seed oil content is_a: SOY:0001676 ! Seed protein content created_by: rnelson creation_date: 2011-10-28T12:44:56Z [Term] id: SOY:0001791 name: Seed weight per plant namespace: soybean_trait def: "The weight of all the seeds harvested from a single plant." [SOY:001] comment: Often expressed as an average across a number of plants. xref: TO:TO\:0000449 "grain yield per plant" is_a: SOY:0001407 ! Soybean Yield Traits created_by: rnelson creation_date: 2011-10-28T12:48:41Z [Term] id: SOY:0001792 name: Seed hardness namespace: soybean_trait def: "The ability of cooked seeds to resist penetration." [SOY:001] xref: PO:PO\:0009010 "seed" xref: TO:TO\:0020016 "seed texture" is_a: SOY:0001409 ! Soybean Quality Traits created_by: rnelson creation_date: 2011-10-28T12:50:43Z [Term] id: SOY:0001793 name: Root Nodulation namespace: soybean_trait def: "Root nodule formation due to interaction with microorganisms." [SOY:001] xref: GO:GO\:0009877 "nodulation" xref: GO:GO\:0051819 "induction of tumor, nodule, or growth in other organism involved in symbiotic interaction" xref: PO:PO\:0003023 "root nodule" is_a: SOY:0001984 ! Root growth and development traits created_by: rnelson creation_date: 2010-09-27T01:58:56Z [Term] id: SOY:0001794 name: Leaflet margin namespace: soybean_trait def: "Appearance of the margin of a leaflet." [SOY:001] synonym: "Leaf margin" NARROW [] xref: PO:PO\:0020049 "leaflet" xref: PO:PO\:0025009 "leaf lamina margin" is_a: SOY:0001637 ! Leaflet Morphology created_by: rnelson creation_date: 2011-11-10T03:21:22Z [Term] id: SOY:0001795 name: Seed cadmium concentration namespace: soybean_trait def: "The cadmium concentration in seeds." [SOY:001] xref: PO:PO\:0009010 "seed" xref: TO:TO\:0006059 "cadmium concentration" is_a: SOY:0001842 ! Mineral content created_by: rnelson creation_date: 2012-02-11T11:02:21Z [Term] id: SOY:0001796 name: Root Nodule Morphology namespace: soybean_trait def: "The morphology of a root nodule." [SOY:001] xref: PO:PO\:0003023 "root nodule" xref: TO:TO\:0000898 "root nodule anatomy and morphology trait" is_a: SOY:0001398 ! Soybean Morphology and Anatomy Traits created_by: rnelson creation_date: 2010-09-27T02:07:43Z [Term] id: SOY:0001797 name: Root Nodule Color namespace: soybean_trait def: "The color of a root nodule." [SOY:001] xref: PO:PO\:0003023 "root nodule" xref: TO:TO\:0000898 "root nodule anatomy and morphology trait" is_a: SOY:0001796 ! Root Nodule Morphology created_by: rnelson creation_date: 2010-09-27T02:08:07Z [Term] id: SOY:0001798 name: Root Nodule Size namespace: soybean_trait def: "The volume of a root nodule." [SOY:001] xref: PO:PO\:0003023 "root nodule" xref: TO:TO\:0000898 "root nodule anatomy and morphology trait" is_a: SOY:0001796 ! Root Nodule Morphology created_by: rnelson creation_date: 2010-09-27T02:08:22Z [Term] id: SOY:0001799 name: Root Nodule Growth namespace: soybean_trait def: "Growth characteristics of a root nodule." [SOY:001] synonym: "nodule morphogenesis" RELATED [] xref: GO:GO\:0009878 "nodule morphogenesis" xref: PO:PO\:0003023 "root nodule" is_a: SOY:0001984 ! Root growth and development traits created_by: rnelson creation_date: 2010-09-27T02:11:15Z [Term] id: SOY:0001800 name: Determinate Root Nodule Growth Habit namespace: soybean_trait def: "Nodule degenerates 50 - 60 days after infection." [SOY:001] synonym: "determinate nodule" EXACT [] xref: PO:PO\:0004539 "determinate nodule" xref: PO:PO\:0009005 "root" is_a: SOY:0001799 ! Root Nodule Growth created_by: rnelson creation_date: 2010-09-27T02:12:35Z [Term] id: SOY:0001801 name: Indeterminate Root Nodule Growth Habit namespace: soybean_trait def: "Nodule growth for longer than 60 days post infection." [SOY:001] xref: PO:PO\:0004538 "indeterminate nodule" xref: PO:PO\:0009005 "root" is_a: SOY:0001799 ! Root Nodule Growth created_by: rnelson creation_date: 2010-09-27T02:13:08Z [Term] id: SOY:0001802 name: Pod wall width namespace: soybean_trait def: "The width of the wall of a pod." [SOY:001] xref: PO:PO\:0009001 "fruit" is_a: SOY:0001659 ! Pod Morphology created_by: rexnelson creation_date: 2013-06-28T12:42:57Z [Term] id: SOY:0001803 name: Canopy wilt namespace: soybean_trait def: "The extent to which a plants leaf canopy has wilted due to dessication." [SOY:001] comment: Can be qualitatively measured on a 0 to 100 scale, with 0 having no visible wilting, 40 having moderate wilting, 60 having severe wilting and 100 being dead. synonym: "leaf rolling" NARROW [] synonym: "wilting" NARROW [] xref: PO:PO\:0020049 "leaflet" xref: TO:TO\:0000085 "leaf rolling" is_a: SOY:0001701 ! Drought Tolerance created_by: rexnelson creation_date: 2013-07-02T13:04:17Z [Term] id: SOY:0001804 name: Pubescence Length namespace: soybean_trait def: "The length of the trichome from the base to the tip." [SOY:001] xref: PO:PO\:0000282 "trichome" xref: TO:TO\:0000911 "trichome anatomy and morphology trait" is_a: SOY:0001718 ! Pubescence Traits created_by: rnelson creation_date: 2010-09-30T11:46:13Z [Term] id: SOY:0001805 name: Flower form namespace: soybean_trait def: "Final developmental form of a flower." [SoyTO:rtn] comment: Final form could be cleistogamous (closed, TO:0000882) or chasmogamous (open, TO:0000883). xref: GO:GO\:0048439 "flower morphogenesis" xref: PO:PO\:00009046 "flower" xref: TO:TO\:0000881 "flower type" is_a: SOY:0001985 ! Flower morphology and anatomy traits created_by: rnelson creation_date: 2012-04-25T08:00:38Z [Term] id: SOY:0001806 name: Somatic embryogenesis namespace: soybean_trait def: "The frequency of somatic embryogenesis (FSE) defined as the number of regenerated explants divided by the total inoculated explants." [DOI:10.1007/s00299-009-0804-1] synonym: "somatic plant embryo" EXACT [] xref: GO:GO\:0010262 "somatic embroygenesis" xref: PO:PO\:0025302 "somatic plant embryo" is_a: SOY:0001986 ! Somatic embryo growth and development created_by: rnelson creation_date: 2012-04-25T04:32:43Z [Term] id: SOY:0001807 name: Phototropism namespace: soybean_trait def: "Directional growth of a plant or plant part in relation to a light source." [SOY:001] xref: GO:GO\:0009638 "phototropism" xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0002650 "Phototropism" is_a: SOY:0001408 ! Soybean Growth and Development Traits created_by: rnelson creation_date: 2010-10-04T08:56:38Z [Term] id: SOY:0001808 name: Gravitropism namespace: soybean_trait def: "The ability of a plant or plant part to respond to gravity." [SOY:001] xref: GO:GO\:0009629 "response to gravity" xref: TO:TO\:0002693 "gravity response trait." is_a: SOY:0001408 ! Soybean Growth and Development Traits created_by: rnelson creation_date: 2010-10-04T09:30:40Z [Term] id: SOY:0001809 name: Heliotropism namespace: soybean_trait def: "The movement of plants or plant parts in response to the movement of the sun." [SOY:001] comment: Heliotropism does not involve growth. synonym: "phototropism" EXACT [] xref: GO:GO\:0009638 "phototropism" xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0002650 "Phototropism" is_a: SOY:0001408 ! Soybean Growth and Development Traits created_by: rnelson creation_date: 2010-10-04T09:36:13Z [Term] id: SOY:0001810 name: Root Gravitropism namespace: soybean_trait def: "The ability of the root to respond to gravity." [SOY:001] xref: GO:GO\:0009629 "response to gravity" xref: PO:PO\:0009005 "root" xref: TO:TO\:0002693 "gravity response trait" is_a: SOY:0001808 ! Gravitropism created_by: rnelson creation_date: 2010-10-04T09:07:59Z [Term] id: SOY:0001811 name: Stem Gravitropism namespace: soybean_trait def: "The ability of a stem to respond to gravity." [SOY:001] xref: GO:GO\:0009629 "response to gravity" xref: PO:PO\:0009047 "stem" xref: TO:TO\:0002693 "gravity response trait" is_a: SOY:0001808 ! Gravitropism created_by: rnelson creation_date: 2010-10-04T09:15:48Z [Term] id: SOY:0001812 name: Inorganic salt sensitivity namespace: soybean_trait def: "Reaction of the plant or plant part to inorganic salts or ions." [SOY:001] xref: TO:TO\:0000429 "salt sensitivity" is_a: SOY:0001406 ! Abiotic Stress Resistance created_by: rnelson creation_date: 2011-04-15T01:13:42Z [Term] id: SOY:0001813 name: Chloride ion sensitivity namespace: soybean_trait def: "Reaction of the plant or plant part to chloride ion concentration." [SOY:001] xref: TO:TO\:0000029 "chlorine sensitivity" is_a: SOY:0001812 ! Inorganic salt sensitivity created_by: rnelson creation_date: 2011-04-15T01:19:47Z [Term] id: SOY:0001814 name: Herbicide sensitivity namespace: soybean_trait def: "Reaction of the plant or plant part to herbicide exposure." [SOY:001] xref: TO:TO\:0000168 "abiotic stress tolerance" is_a: SOY:0001406 ! Abiotic Stress Resistance created_by: rnelson creation_date: 2011-04-15T01:23:51Z [Term] id: SOY:0001815 name: Rhizobium response namespace: soybean_trait def: "Reaction of roots or root hairs to the presence of Rhizobium species." [SOY:001] xref: GO:GO\:0080034 "host response to induction by symbiont of tumor, nodule or growth in host" is_a: SOY:0001793 ! Root Nodulation created_by: rnelson creation_date: 2011-04-15T01:32:01Z [Term] id: SOY:0001816 name: Response to Bradyrhizobium species. namespace: soybean_trait def: "Response of the root or root hair to the presence of Bradyrhizobium species." [SOY:001] is_a: SOY:0001815 ! Rhizobium response created_by: rnelson creation_date: 2011-04-15T01:34:48Z [Term] id: SOY:0001817 name: Response to Sinorhizobium species. namespace: soybean_trait def: "Response of the root or root hair to the presence of Sinorhizobium species." [SOY:001] xref: GO:GO\:0080034 "host response to induction by symbiont of tumor, nodule or growth in host" xref: PO:PO\:0009005 "roog" is_a: SOY:0001815 ! Rhizobium response created_by: rnelson creation_date: 2011-04-15T01:36:31Z [Term] id: SOY:0001818 name: Response to Mesorhizobium species. namespace: soybean_trait def: "Response of the root or root hair to the presence of Mesorhizobium species." [SOY:001] xref: GO:GO\:0080034 "host response to induction by symbiont of tumor, nodule or growth in host" xref: PO:PO\:0009005 "root" is_a: SOY:0001815 ! Rhizobium response created_by: rnelson creation_date: 2011-04-15T01:37:32Z [Term] id: SOY:0001819 name: Response to Bradyrhizobium japonicum. namespace: soybean_trait def: "Response of the root or root hair to the presence of B. japonicum." [SOY:001] xref: GO:GO\:0080034 "host response to induction by symbiont of tumor, nodule or growth in host" xref: PO:PO\:0009005 "root" is_a: SOY:0001816 ! Response to Bradyrhizobium species. created_by: rnelson creation_date: 2011-04-15T01:38:51Z [Term] id: SOY:0001820 name: Response to Bradyrhizobium elkanii. namespace: soybean_trait def: "Response of the root or root hair to the presence of B elkanii." [SOY:001] xref: GO:GO\:0080034 "host response to induction by symbiont of tumor, nodule or growth in host" xref: PO:PO\:0009005 "root" is_a: SOY:0001816 ! Response to Bradyrhizobium species. created_by: rnelson creation_date: 2011-04-15T01:39:50Z [Term] id: SOY:0001821 name: Response to Bradyrhizobium liaoningense. namespace: soybean_trait def: "Response of the root or root hair to the presence of B. lianoingense." [SOY:001] xref: GO:GO\:0080034 "host response to induction by symbiont of tumor, nodule or growth in host" xref: PO:PO\:0009005 "root" is_a: SOY:0001816 ! Response to Bradyrhizobium species. created_by: rnelson creation_date: 2011-04-15T01:42:08Z [Term] id: SOY:0001822 name: Response to Sinorhizobium fredii. namespace: soybean_trait def: "Response of the root or root hair to the presence of S. fredii." [SOY:001] xref: GO:GO\:0080034 "host response to induction by symbiont of tumor, nodule or growth in host" xref: PO:PO\:0009005 "root" is_a: SOY:0001817 ! Response to Sinorhizobium species. created_by: rnelson creation_date: 2011-04-15T01:43:35Z [Term] id: SOY:0001823 name: Response to Mesorhizobium tianshanense. namespace: soybean_trait def: "Response of the root or root hair to the presence of M. tianshanense." [SOY:001] xref: GO:GO\:0080034 "host response to induction by symbiont of tumor, nodule or growth in host" xref: PO:PO\:0009005 "root" is_a: SOY:0001818 ! Response to Mesorhizobium species. created_by: rnelson creation_date: 2011-04-15T01:44:39Z [Term] id: SOY:0001824 name: Reproductive stage length namespace: soybean_trait def: "The number of days between growth stage R1 and R8 or R8 - R1 in days past planting." [SOY:001] comment: QTL map symbol is Reprod. This trait has also been measured as the number of days between R1 and R7. synonym: "flowering period" RELATED [] xref: PO:PO\:0007016 "whole plant flowering stage" xref: TO:TO\:0000366 "reproductive growth time" is_a: SOY:0001412 ! Soybean Fertility or Sterility Traits created_by: rnelson creation_date: 2011-04-18T11:32:23Z [Term] id: SOY:0001825 name: Somatic embryos per explant namespace: soybean_trait def: "Somatic embryos per explant (EPE) defined as the number of somatic explants with embryos/total explants." [DOI:10.1007/s00299-009-0804-1] xref: PO:PO\:0025302 "Somatic Plant Embryo" is_a: SOY:0001986 ! Somatic embryo growth and development created_by: rnelson creation_date: 2012-04-25T04:48:35Z [Term] id: SOY:0001826 name: Reaction to Nematospora coryli infection namespace: soybean_trait def: "Reaction of the plant or plant part to N. coryli infection." [SOY:001] comment: Leaf spot can also be caused by Nematospora lycopersici. synonym: "Eremothecium coryli" EXACT [] synonym: "Nematospora lycopersici" EXACT [] synonym: "Yeast spot" EXACT [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001828 ! Reaction to Nematospora infection created_by: rnelson creation_date: 2011-04-19T09:50:47Z [Term] id: SOY:0001827 name: Somatic embryogenesis efficiency namespace: soybean_trait def: "Somatic embryo efficiency defined as the product of somatic embryogenesis (FSE) and somatic embryos per explant (EPE)." [DOI:10.1007/s00299-009-0804-1] synonym: "somatic plant embryogenesis" EXACT [] xref: GO:GO\:0010262 "somatic embryogenesis" xref: PO:PO\:0025302 "Somatic plant embryo" is_a: SOY:0001986 ! Somatic embryo growth and development created_by: rnelson creation_date: 2012-04-25T04:51:38Z [Term] id: SOY:0001828 name: Reaction to Nematospora infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by Nematospora species." [SOY:001] is_a: SOY:0001402 ! Fungal Disease Resistance Traits created_by: rnelson creation_date: 2011-04-19T09:54:28Z [Term] id: SOY:0001829 name: Reaction to Nematospora lycopersici infection namespace: soybean_trait def: "Reaction of the plant or plant part to infection by N. lycopersici." [SOY:001] synonym: "Nematospora coryli" EXACT [] synonym: "Yeast spot" EXACT [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001828 ! Reaction to Nematospora infection created_by: rnelson creation_date: 2011-04-19T09:55:57Z [Term] id: SOY:0001830 name: Seed nitrogen content at growth stage R5 namespace: soybean_trait def: "The amount of nitrogen contained in a seed on a plant at growth stage R5." [DOI:10.1007/s11746-004-0860-4] xref: PO:PO\:0009010 "seed" xref: TO:TO\:0020093 "nitrogen content" is_a: SOY:0001631 ! Seed nitrogen content created_by: rnelson creation_date: 2012-05-01T01:27:17Z [Term] id: SOY:0001831 name: Seed nitrogen content at growth stage R6 namespace: soybean_trait def: "The nitrogen content of seeds at growth stage R6." [DOI:10.1007/s11746-004-0860-4] xref: PO:PO\:0007031 "mid whole plant fruit ripening stage" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0020093 "nitrogen content" is_a: SOY:0001631 ! Seed nitrogen content created_by: rnelson creation_date: 2012-05-01T01:40:41Z [Term] id: SOY:0001832 name: Seed nitrogen content at growth stage R7 namespace: soybean_trait def: "The nitrogen content of seeds at growth stage R7." [DOI:10.1007/s11746-004-0860-4] xref: PO:PO\:0007050 "late whole plant fruit ripening stage" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0020093 "nitrogen content" is_a: SOY:0001631 ! Seed nitrogen content created_by: rnelson creation_date: 2012-05-01T01:42:41Z [Term] id: SOY:0001833 name: Phosphorus content namespace: soybean_trait def: "The phosphate content of a plant or plant part." [SOY:001] xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0001024 "Phosphorus content" is_a: SOY:0001842 ! Mineral content created_by: rnelson creation_date: 2012-05-03T08:46:13Z [Term] id: SOY:0001834 name: Leaf phosphorus content namespace: soybean_trait def: "The phosphorus content of a leaf." [SOY:001] xref: PO:PO\:0020049 "leaflet" xref: TO:TO\:0001025 "Leaf phosphorus content" is_a: SOY:0001833 ! Phosphorus content created_by: rnelson creation_date: 2012-05-03T08:53:31Z [Term] id: SOY:0001835 name: Seed phosphorus content namespace: soybean_trait def: "The phosphorus content of a seed." [SOY:001] xref: PO:PO\:0009010 "seed" xref: TO:TO\:0002666 "Seed phosphorus content" is_a: SOY:0001833 ! Phosphorus content created_by: rnelson creation_date: 2012-05-03T08:55:31Z [Term] id: SOY:0001836 name: Root phosphorus content namespace: soybean_trait def: "The phosphorus content of the root system." [SOY:001] xref: PO:PO\:000905 "root" xref: TO:TO\:0001024 "Phosphorus content" is_a: SOY:0001833 ! Phosphorus content created_by: rnelson creation_date: 2012-05-03T10:03:24Z [Term] id: SOY:0001837 name: Seed methionine and cysteine content namespace: soybean_trait def: "The amount of methionine and cysteine in seeds." [SOY:001] xref: CHEBI:CHEBI\:16643 "L-methionine" xref: CHEBI:CHEBI\:17561 "L-cysteine" xref: PO:PO\:0009010 "seed" is_a: SOY:0001757 ! Amino Acid Composition created_by: rnelson creation_date: 2012-05-03T10:45:01Z [Term] id: SOY:0001838 name: Manganese induced leaflet necrosis namespace: soybean_trait def: "Leaflet necrosis induced by elevated manganese ion concentration." [SOY:001] xref: PO:PO\:0020049 "leaflet" xref: TO:TO\:0000073 "manganese sensitivity" is_a: SOY:0001601 ! Manganese ion sensitivity created_by: rnelson creation_date: 2012-05-04T05:38:23Z [Term] id: SOY:0001839 name: Manganese induced root necrosis namespace: soybean_trait def: "Root necrosis induced by elevated concentration of manganese ions." [SOY:001] xref: PO:PO\:0009005 "root" xref: TO:TO\:0000073 "manganese sensitivity" is_a: SOY:0001601 ! Manganese ion sensitivity created_by: rnelson creation_date: 2012-05-04T05:44:37Z [Term] id: SOY:0001840 name: Chilling induced seed coat color namespace: soybean_trait def: "A change in the normal seed coat color induced by low temperatures." [SOY:001] xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000391 "seed color" is_a: SOY:0001409 ! Soybean Quality Traits created_by: rnelson creation_date: 2012-05-07T05:38:51Z [Term] id: SOY:0001841 name: Leaflet alkaloid content namespace: soybean_trait def: "The alkaloid content of a leaflet." [SOY:001] xref: PO:PO\:0020049 "leaflet" xref: TO:TO\:0000381 "metabolite content related trait" is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rnelson creation_date: 2012-10-16T11:24:24Z [Term] id: SOY:0001842 name: Mineral content namespace: soybean_trait def: "Mineral content of a plant or plant part." [SOY:001] xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0000465 "mineral and ion content related trait" is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rnelson creation_date: 2012-10-16T11:27:34Z [Term] id: SOY:0001843 name: Saccharide:Di content namespace: soybean_trait def: "The amount of disaccharides contained in a plant or plant part." [SOY:001] synonym: "disaccharides" EXACT [] xref: CHEBI:CHEBI\:36233 "disaccharide" xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0006003 "oligosaccharide content" is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rnelson creation_date: 2012-10-16T13:53:26Z [Term] id: SOY:0001844 name: Saccharide:oligo content namespace: soybean_trait def: "The oligosaccharide content of a plant or plant part." [SOY:001] synonym: "oligosaccharide content" EXACT [] xref: CHEBI:CHEBI\:50699 "oligosaccharide" xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0006003 "oligosaccharide content" is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rnelson creation_date: 2012-10-16T13:54:34Z [Term] id: SOY:0001845 name: Oil content namespace: soybean_trait def: "The total oil content of a plant or plant part." [SOY:001] xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0000604 "fat and essential oil content" is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rnelson creation_date: 2012-10-16T13:59:09Z [Term] id: SOY:0001846 name: Enzymatic activity namespace: soybean_trait def: "Enzymatic activity of a plant or plant part." [SOY:001] xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0000599 "enzymatic activity trait" is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rnelson creation_date: 2012-10-16T14:19:39Z [Term] id: SOY:0001847 name: Seed coat peroxidase activity namespace: soybean_trait def: "Peroxidase activity contained in the seed coat." [SOY:001] xref: GO:1990137 "plant seed peroxidase activitiy" xref: PO:0009010 "seed" xref: PO:0009088 "seed coat" is_a: SOY:0001714 ! Peroxidase activity created_by: rnelson creation_date: 2012-10-16T14:21:49Z [Term] id: SOY:0001848 name: Nitrogen content namespace: soybean_trait def: "The content of a plant or plant part." [SOY:001] xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0020093 "nitrogen content" is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rnelson creation_date: 2012-10-16T14:24:19Z [Term] id: SOY:0001849 name: Seed isoflavone content namespace: soybean_trait def: "The total isoflavone content of a seed." [SOY:001] xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000290 "Flavonoid content" is_a: SOY:0001667 ! Isoflavone content created_by: rnelson creation_date: 2012-10-16T14:26:24Z [Term] id: SOY:0001850 name: Leaflet weight namespace: soybean_trait def: "The weight of a leaflet." [SOY:001] comment: Weight can be fresh(wet) or dry. synonym: "dry leaflet weight" NARROW [] synonym: "fresh leaflet weight" NARROW [] synonym: "leaflet dry weight" NARROW [] synonym: "leaflet fresh weight" NARROW [] xref: PO:PO\:0020049 "leaflet" xref: TO:TO\:0000505 "leaf weight" is_a: SOY:0001637 ! Leaflet Morphology created_by: rexnelson creation_date: 2013-07-02T13:30:12Z [Term] id: SOY:0001851 name: Reaction to Aphis glycines namespace: soybean_trait def: "The reaction of the plant or plant part to damage caused by Aphis glycines feeding." [SOY:001] comment: Resistance gene symbol is Rag. synonym: "Soybean aphid" RELATED [] xref: GO:GO\:0009625 "response to insect" xref: TO:TO\:0006067 "aphid resistance" is_a: SOY:0001605 ! Reaction to Aphis species created_by: rexnelson creation_date: 2013-07-02T13:48:47Z [Term] id: SOY:0001852 name: Seed coat cracking namespace: soybean_trait def: "The extent to which seeds have cracked seed coats at harvest." [SOY:001] comment: Usually measured in batch with a qualitative scale of 0 to 4 with 0 representing no cracking and 4 representing extensive cracking. xref: PO:PO\:0009088 "seed coat" xref: TO:TO\:0000838 "seed coat anatomy and morphology trait" is_a: SOY:0001409 ! Soybean Quality Traits created_by: rexnelson creation_date: 2013-07-02T14:04:23Z [Term] id: SOY:0001853 name: Pod wall weight namespace: soybean_trait def: "The weight of a pod with seeds removed." [SOY:001] xref: PO:PO\:0009001 "fruit" is_a: SOY:0001659 ! Pod Morphology created_by: rexnelson creation_date: 2013-07-02T16:11:00Z [Term] id: SOY:0001854 name: Reaction to Gibberella zeae infection namespace: soybean_trait def: "The reaction of the plant or plant part to infection by Gibberella zeae." [SOY:001] comment: The anamorph of this fungus is Fusarium graminearum. Symptoms include damping-off, water soaked lesions at the innoculation site and often associated with a pink to red brown color. synonym: "damping-off" BROAD [] synonym: "Fusarium graminearum" EXACT [] synonym: "pod blight" BROAD [] synonym: "post-emergence damping-off" RELATED [] synonym: "pre-emergence damping-off" BROAD [] synonym: "seed and root rot" BROAD [] synonym: "seed decay" BROAD [] xref: TO:TO\:0000439 "fungal disease resistance" is_a: SOY:0001402 ! Fungal Disease Resistance Traits created_by: rexnelson creation_date: 2013-07-03T12:54:29Z [Term] id: SOY:0001855 name: Submergence survival rate namespace: soybean_trait def: "The percentage of plants that survive a specified period of submergence." [SOY:001] synonym: "submergence tolerance" BROAD [] synonym: "survival percentage under submergence" EXACT [] xref: GO:GO\:0009413 "response to flooding" xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0000524 "submergence tolerance" is_a: SOY:0001351 ! Flooding Tolerance created_by: rexnelson creation_date: 2013-07-03T13:23:02Z [Term] id: SOY:0001856 name: Flooding yield index namespace: soybean_trait def: "The percent reduction in yield caused by exposure of the plant to a period of flooding." [SOY:001] comment: Flooding yield index is (Fy/Cy) x100, wher Fy is the yield under flooded conditions and Cy is the yield under non-flooded conditions. synonym: "submergence yield index" RELATED [] xref: GO:GO\:0009413 "response to flooding" xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0000286 "submergence sensitivity" is_a: SOY:0001351 ! Flooding Tolerance created_by: rexnelson creation_date: 2013-07-03T13:30:07Z [Term] id: SOY:0001857 name: Row spacing response namespace: soybean_trait def: "The response of the plant or plant part to changes in row spacing." [SOY:001] comment: This trait can be measured in numerous ways including changes in protein, oil and moisture content of seeds. xref: PO:PO\:0000003 "whole plant" is_a: SOY:0001399 ! Miscellaneous Soybean Morphological Traits created_by: rexnelson creation_date: 2013-07-23T10:24:52Z [Term] id: SOY:0001858 name: Chlorophyll content namespace: soybean_trait def: "Chlorophyll content of a plant or plant part." [SOY:001] comment: Includes both chlorophyll-a and chlorophyll-b. This trait is measured in a normal, unstressed environment. xref: GO:GO\:0015994 "chlorophyll metabolic process" xref: PO:PO\:0000003 "whole plant" xref: TO:TO\:0000495 "Chlorophyll content" is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rexnelson creation_date: 2013-07-23T11:07:24Z [Term] id: SOY:0001859 name: Leaflet chlorophyll content namespace: soybean_trait def: "The amount of chlorophyll normally found in a leaflet." [SOY:001] comment: This trait is measured in a normal, unstressed environment. Includes both chlorophyll-a and chlorophyll-b. This trait covers any mutation that changes the leaflet chlorphyll content regardless of direction (increase/decrease). synonym: "Increased leaflet chlorphyll content" RELATED [] synonym: "Reduced leaflet chlorophyll content" RELATED [] xref: PO:PO\:0020049 "leaflet" xref: TO:TO\:0000495 "Chlorophyll content" is_a: SOY:0001858 ! Chlorophyll content created_by: rexnelson creation_date: 2013-07-23T11:09:10Z [Term] id: SOY:0001860 name: Pod weight ratio namespace: soybean_trait def: "Pod wall weight (empty pod) divided by pod weight (intact pod)." [DOI:DOI\:10.5897/AJB11.1409, SOY:001] xref: PO:PO\:0009001 "fruit" xref: TO:TO\:0002746 "fruit weight" is_a: SOY:0001659 ! Pod Morphology created_by: rexnelson creation_date: 2013-07-23T12:35:21Z [Term] id: SOY:0001861 name: Seed 2AP content namespace: soybean_trait def: "The amount of 2-acetyl-1-pyrroline (2AP) in a seed." [SOY:001] synonym: "2-acetyl-4,5-dihydro-3H-pyrrole" EXACT [] synonym: "2AP" EXACT [] synonym: "APR" EXACT [] synonym: "fragrance" BROAD [] xref: CHEBI:CHEBI\:67125 "2-acetyl-1-pyrroline" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000674 "phytochemical compound content" is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rexnelson creation_date: 2013-07-23T12:48:43Z [Term] id: SOY:0001862 name: Seedling stage namespace: soybean_whole_plant_growth_stage def: "Plant development between emergence (VE or BBCH scale 09) to the unfolding of the first trifoliolate leaf (V1 or BBCH scale 12)." [SOY:001] is_a: SOY:0000097 ! Soybean Whole Plant Growth Stages created_by: rexnelson creation_date: 2013-08-16T12:56:42Z [Term] id: SOY:0001863 name: Vegetative stage namespace: soybean_whole_plant_growth_stage def: "Plant development between the unfolding of the first trifoliolate leaf (V1 or BBCH growth stage 12) to the plant begins reproductive development (R1 or BBCH growth stage 60)." [SOY:001] is_a: SOY:0000097 ! Soybean Whole Plant Growth Stages created_by: rexnelson creation_date: 2013-08-16T13:02:24Z [Term] id: SOY:0001864 name: Reproductive stage, plant namespace: soybean_whole_plant_growth_stage def: "Plant development between the beginning of the reproductive stage (R1 or BBCH growth stage 60) and Full seed stage R6 or BBCH growth stage 79." [SOY:001] is_a: SOY:0000097 ! Soybean Whole Plant Growth Stages created_by: rexnelson creation_date: 2013-08-16T13:15:56Z [Term] id: SOY:0001865 name: Senescence stage namespace: soybean_whole_plant_growth_stage def: "Development of a plant between the end of the reproductive phase (R6 or BBCH growth stage 79) to harvest stage (R8 or BBCH growth stage 97)." [] is_a: SOY:0000097 ! Soybean Whole Plant Growth Stages created_by: rexnelson creation_date: 2013-08-16T13:20:56Z [Term] id: SOY:0001866 name: Reaction to Lamprosema indicata namespace: soybean_trait def: "The reaction of the plant or plant part to contact or damage from L. indicata larval feeding." [SOY:001] synonym: "bean pyralid" EXACT [] is_a: SOY:0001371 ! Reaction to insect created_by: rexnelson creation_date: 2013-08-28T12:48:36Z [Term] id: SOY:0001867 name: Seed palmitic+stearic acid content namespace: soybean_trait def: "The content of palmitic and stearic acid in a plant or plant part." [SOY:001] comment: Palmitic and steric acids are saturated fatty acids so this trait is could also be called seed saturated fatty acid content. synonym: "Seed saturated fatty acid content" NARROW [] xref: CHEBI:CHEBI\:15756 "palmitic acid" xref: PO:PO\:0009010 "seed" xref: TO:TO\:0000491 "fat and essential oil composition related trait" xref: TO:TO\:0005003 "stearic acid content" is_a: SOY:0001668 ! Seed oil content created_by: rexnelson creation_date: 2013-08-28T14:11:53Z [Term] id: SOY:0001868 name: Shoot weight ratio namespace: soybean_trait def: "The ratio of the dry weight of the shoots divided by the fresh weight of the shoots." [SOY:001] xref: PO:PO\:0009006 "shoot system" xref: PO:PO\:0025025 "root system" xref: TO:TO\:0000552 "shoot dry weight" xref: TO:TO\:0000571 "shoot fresh weight" is_a: SOY:0001746 ! Shoot weight created_by: rexnelson creation_date: 2013-08-29T11:15:29Z [Term] id: SOY:0001869 name: Root weight, dry namespace: soybean_trait def: "The dry weight of a root or root system." [SOY:001] xref: PO:PO\:0025025 "root system" xref: TO:TO\:0000078 "root dry weight" is_a: SOY:0001743 ! Root Weight created_by: rexnelson creation_date: 2013-09-13T14:19:54Z [Term] id: SOY:0001870 name: Root weight, fresh namespace: soybean_trait def: "The fresh weight of a root or root system." [SOY:001] xref: PO:PO\:0025025 "root system" xref: TO:TO\:0000578 "root fresh weight" is_a: SOY:0001743 ! Root Weight created_by: rexnelson creation_date: 2013-09-13T14:21:03Z [Term] id: SOY:0001871 name: shoot weight, dry namespace: soybean_trait def: "The dry weight of a shoot or shoot system." [SOY:001] comment: Can be measured as total shoot dry weight/ number of plants measured. synonym: "Stem weight" EXACT [] xref: PO:PO\:0009006 "shoot system" xref: TO:TO\:000552 "shoot dry weight" is_a: SOY:0001746 ! Shoot weight created_by: rexnelson creation_date: 2013-09-13T14:29:12Z [Term] id: SOY:0001872 name: shoot weight, fresh namespace: soybean_trait def: "The fresh weight of a shoot or shoot system." [SOY:001] xref: PO:PO\:0009006 "shoot system" xref: TO:TO\:0000571 "shoot fresh weight" is_a: SOY:0001746 ! Shoot weight created_by: rexnelson creation_date: 2013-09-13T14:31:15Z [Term] id: SOY:0001873 name: Waterlogging response namespace: soybean_trait def: "Response of the plant to inundation of the root system only." [SOY:001] is_a: SOY:0001351 ! Flooding Tolerance created_by: rexnelson creation_date: 2013-09-23T13:27:43Z [Term] id: SOY:0001874 name: Photosynthesis namespace: soybean_trait def: "Traits effecting photosynthesis or photosynthetic rate." [SOY:001] is_a: SOY:0001411 ! Miscellaneous Soybean Traits created_by: rexnelson creation_date: 2014-03-11T10:59:07Z [Term] id: SOY:0001875 name: Chlorophyll transient fluorescence namespace: soybean_trait def: "The transient fluorescence traits of a plant or plant part." [SOY:001] is_a: SOY:0001874 ! Photosynthesis created_by: rexnelson creation_date: 2014-03-11T11:17:16Z [Term] id: SOY:0001876 name: Maximum quantum yield of PSII primary photochemistry (Fv/Fm), dark-adapted namespace: soybean_trait def: "The maximum quantum yield of photosystem II primary photochemistry in the dark adapted state. Calculated as Fv/Fm. Estimated from Fm - Fo/Fm where Fo is the dark-adapted fluorescence and Fm is the maximum fluorescence under saturating light or a photosynthesis inhibitor." [DOI:10.1007/s10681-012-0697-x] comment: Also referred to as photosynthesis efficiency. is_a: SOY:0001875 ! Chlorophyll transient fluorescence created_by: rexnelson creation_date: 2014-03-11T11:18:07Z [Term] id: SOY:0001877 name: Light energy absorbed per reaction center (ABS/RC) namespace: soybean_trait def: "Commonly referred to as ABS/RC. It is the average energy absorption by chlorophyll molecules per active reaction center. Can be calculated as (TRo/RC)/(TRo/ABS) where TRo is the the maximal rate by which an excitation is trapped by the RC resulting in the reduction of Qa." [DOI:DOI\:10.1590/S1677-04202011000400007] is_a: SOY:0001875 ! Chlorophyll transient fluorescence created_by: rexnelson creation_date: 2014-03-11T11:43:58Z [Term] id: SOY:0001878 name: Quantum yield of electron transport (ETo/ABS) namespace: soybean_trait def: "The quantum yield of the electron transport flux from Qa to Qb, defined as electron transport from Qa to Qb divided by the light absorption (ABS) of the photo-centers." [PMID:21295993] is_a: SOY:0001875 ! Chlorophyll transient fluorescence created_by: rexnelson creation_date: 2014-03-11T12:57:18Z [Term] id: SOY:0001879 name: Probability a trapped excitation moves an electron beyond Qa- (ETo/TRo) namespace: soybean_trait def: "The probability that a trapped excitation moves an electron into the electron transport chain beyond QA-. Expressed as ETo/TRo, where TR is the photon flux partially captured by the PSII reaction centers and ET is the transfer of electrons from water past Qa reduction." [PMID:PMID\:21295993] is_a: SOY:0001875 ! Chlorophyll transient fluorescence created_by: rexnelson creation_date: 2014-03-12T08:22:52Z [Term] id: SOY:0001880 name: Performance index on absorption basis (PIabs) namespace: soybean_trait def: "Performance index for energy conservation from absorbed photons to the reduction of Qb in the PSII antenna system." [PMID:PMID\:21295993] is_a: SOY:0001875 ! Chlorophyll transient fluorescence created_by: rexnelson creation_date: 2014-03-13T10:37:14Z [Term] id: SOY:0001881 name: Temperature stress resistance namespace: soybean_trait def: "The effect of temperature stress on a plant or plant part." [SOY:001] is_a: SOY:0001406 ! Abiotic Stress Resistance created_by: rexnelson creation_date: 2014-03-13T11:22:55Z [Term] id: SOY:0001882 name: Heat stress resistance namespace: soybean_trait def: "Resistance of a plant or plant part to damage by higher than normal temperatures." [SOY:001] is_a: SOY:0001881 ! Temperature stress resistance created_by: rexnelson creation_date: 2014-03-13T11:23:41Z [Term] id: SOY:0001883 name: Cold stress resistance namespace: soybean_trait def: "Resistance of a plant or plant part to damage by lower than normal temperatures." [SOY:001] is_a: SOY:0001881 ! Temperature stress resistance created_by: rexnelson creation_date: 2014-03-13T11:24:05Z [Term] id: SOY:0001884 name: Root nodule number namespace: soybean_trait def: "The amount of nodules produced in the root system." [SOY:001] comment: Usually compared to a type specimen or wild-type. xref: GO:GO\:0009877 "nodulation" xref: PO:PO\:0003023 "root nodule" xref: TO:TO\:0000900 "root nodule number" is_a: SOY:0001796 ! Root Nodule Morphology created_by: rexnelson creation_date: 2014-03-19T10:02:36Z [Term] id: SOY:0001885 name: Seed verbascose content namespace: soybean_trait def: "The amount of the oligosaccharide verbascose in seeds." [SOY:001] comment: Usually measured as a percentage of the seed saccharide content. Verbascose is a pentasaccharide of the raffinose family consisting of galactose units joined to sucrose. synonym: "D-verbascose" RELATED [] xref: ChEBI:ChEBI\:28586 "Verbascose" xref: PubChem:CID\:441434 "verbascos" is_a: SOY:0001617 ! Seed soluble oligosaccharides created_by: rexnelson creation_date: 2014-03-19T10:49:59Z [Term] id: SOY:0001886 name: Leaflet surface form namespace: soybean_trait def: "The physical state of the leaflet surface or lamina." [SOY:001] comment: Surface forms include rugose, wavy and flat. is_a: SOY:0001637 ! Leaflet Morphology created_by: rexnelson creation_date: 2014-03-19T16:13:44Z [Term] id: SOY:0001887 name: Primary root number namespace: soybean_trait def: "The number of roots originating from the embryo radical." [SOY:001] xref: PO:PO\:0020127 "primary root" xref: TO:TO\:0002685 "crown root number" is_a: SOY:0001734 ! Primary Root Morphology created_by: rexnelson creation_date: 2014-03-21T08:47:23Z [Term] id: SOY:0001888 name: Floral meristem development namespace: soybean_trait def: "Development of the floral meristem that gives rise to the floral organs." [] xref: PO:PO\:0000229 "flower meristem" xref: TO:TO\:0006022 "floral organ development trait" is_a: SOY:0001639 ! Flower development traits created_by: rexnelson creation_date: 2014-03-21T11:29:57Z [Term] id: SOY:0001889 name: Root color namespace: soybean_trait def: "Color of the root system." [SOY:001] comment: Values include light, dark, red, brown. xref: PO:PO\:0025025 "Root system" xref: TO:TO\:0000065 "Root color" is_a: SOY:0001732 ! Root Morphology created_by: rexnelson creation_date: 2014-03-21T11:44:32Z [Term] id: SOY:0001890 name: Root nodulation absent namespace: soybean_trait def: "Absence of root nodule formation in the presence of competent microorganisms." [SOY:001] xref: GO:GO\:0009877 "nodulation" xref: PO:PO\:0003023 "Root nodule" xref: TO:TO\:0000900 "Root nodule number" is_a: SOY:0001793 ! Root Nodulation created_by: rexnelson creation_date: 2014-03-21T11:49:50Z [Term] id: SOY:0001891 name: Root number namespace: soybean_trait def: "The total number of root projections." [SOY:001] comment: This includes projections from all root types excluding root hairs. xref: PO:PO\:0025025 "root system" xref: TO:TO\:0000084 "root number" is_a: SOY:0001732 ! Root Morphology created_by: rexnelson creation_date: 2014-03-21T12:00:42Z [Term] id: SOY:0001892 name: Apical dominance namespace: soybean_trait def: "Inhibition of lateral meristematic tissue growth by the apical meristematic tissue of a plant axis." [] comment: Can be the main stem inhibiting lateral branch development or any other secondary branch inhibiting lateral branch growth. xref: PO:PO\:0020144 "apical meristem" is_a: SOY:0001408 ! Soybean Growth and Development Traits created_by: rexnelson creation_date: 2014-03-21T13:59:11Z [Term] id: SOY:0001893 name: Petiole color namespace: soybean_trait def: "The color of the petiole." [SOY:001] xref: PO:PO\:0020038 "Petiole" xref: TO:TO\:0002707 "Petiole color" is_a: SOY:0001773 ! Petiole Morphology created_by: rexnelson creation_date: 2014-03-21T14:32:56Z [Term] id: SOY:0001894 name: Hypocotyl diameter namespace: soybean_trait def: "Diameter of the emerged hypocotyl." [SOY:001] xref: PO:PO\:0020100 "hypocotyl" xref: TO:TO\:0000781 "seedling hypocotyl size" is_a: SOY:0001675 ! Hypocotyl Morphology created_by: rexnelson creation_date: 2014-03-21T14:58:21Z [Term] id: SOY:0001895 name: Petiole pulvinus morphology namespace: soybean_trait def: "The physical appearance of the leaf petiole pulvinus." [SOY:001] xref: PO:PO\:0009111 "petiole pulvinus" is_a: SOY:0001398 ! Soybean Morphology and Anatomy Traits created_by: rexnelson creation_date: 2014-03-22T15:18:24Z [Term] id: SOY:0001896 name: Petiole pulvinus color namespace: soybean_trait def: "The color of the leaf petiole pulvinus." [SOY:001] xref: PO:PO\:0009111 "petiole pulvinus" is_a: SOY:0001895 ! Petiole pulvinus morphology created_by: rexnelson creation_date: 2014-03-22T15:21:14Z [Term] id: SOY:0001897 name: Fused leaflets namespace: soybean_trait def: "Two or more leaflets are conjoined at any location." [SOY:001] synonym: "fused leaflets" EXACT [] xref: PO:PO\:0020049 is_a: SOY:0001637 ! Leaflet Morphology created_by: rexnelson creation_date: 2014-03-22T16:26:16Z [Term] id: SOY:0001898 name: Root nodule weight, dry namespace: soybean_trait def: "The weight of a root nodule." [SOY:001] comment: Can be measured on individual nodules or as an average using nodule dry weight/nodule number. xref: PO:PO\:0003023 "root nolule" xref: TO:TO\:0000899 "root nodule weight" is_a: SOY:0001796 ! Root Nodule Morphology created_by: rexnelson creation_date: 2014-04-28T13:58:36Z [Term] id: SOY:0001899 name: Aconitate activity namespace: soybean_trait def: "Aconitate hydratase activity of a plant or plant part." [SOY:001] is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-12T16:39:51Z [Term] id: SOY:0001900 name: Cotyledon aconitate activity namespace: soybean_trait def: "The aconitate hydratase activity in cotyledon tissue." [SOY:001] comment: Catalyzes the conversion of cis-aconitate and water to citrate. Map symbol GmACO. is_a: SOY:0001899 ! Aconitate activity created_by: rexnelson creation_date: 2014-06-12T16:43:29Z [Term] id: SOY:0001901 name: 4-Coumarate:CoA ligase activity namespace: soybean_trait def: "The 4-coumarate:CoA ligase activity of a plant or plant part." [SOY:001] comment: Catalyzes the reaction ATP + 4-coumarate + CoA <=> AMP + diphosphate + 4-coumaroyl-CoA. synonym: "4CL" EXACT [] xref: EC:6.2.1.12 "4-coumarate--CoA ligase" xref: GO:0016207 "4-coumarate-CoA ligase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-12T16:49:34Z [Term] id: SOY:0001902 name: Aminoalcoholphosphotransferase activity namespace: soybean_trait def: "The Aminoalcoholphosphotransferase activity of a plant or plant part." [SOY:001] comment: Map symbol is GmAAPT1. Functions in the biosynthesis of phosphatidylcholine and phosphatidylethanolamine membrane components. is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-12T16:57:17Z [Term] id: SOY:0001903 name: Alcohol dehydrogenase activity namespace: soybean_trait def: "The alcohol dehydrogenase activity in a plant or plant part." [SOY:001] comment: Map symbol GmADH. is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-13T08:20:10Z [Term] id: SOY:0001904 name: Acetolactate synthase activity namespace: soybean_trait def: "The acetolactate synthase activity of a plant or plant part." [SOY:001] comment: Acetolactate synthase responsible for the biosynthesis of the amino acids valine, leucine and isoleucine. This enzyme requires thiamine diphosphate. synonym: "acetolactate pyruvate-lyase" EXACT [GO:0003984] synonym: "acetolactic synthetase" EXACT [GO:0003984] synonym: "alpha-acetohydroxyacid synthase" EXACT [GO:0003984] synonym: "alpha-acetolactate synthase" EXACT [GO:0003984] synonym: "ALS" EXACT [] synonym: "pyruvate:pyruvate acetaldehydetransferase (decarboxylating) " EXACT [EC:2.2.1.6] xref: EC:2.2.1.6 "acetolactate synthase" xref: GO:0003984 "Acetolactate synthase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-13T10:05:37Z [Term] id: SOY:0001905 name: Porphobilinogen synthase activity namespace: soybean_trait def: "The delta-aminolevulinic acid dehydratase activity of a plant or plant part." [SOY:001] comment: Participates in the biosynthesis of heme and chlorophyll synthesis. Catalyzes the reaction: 2 5-aminolevulinate = 2 H(2)O + H(+) + porphobilinogen. synonym: "5-aminolevulinate hydro-lyase" EXACT [] synonym: "5-levulinic acid dehydratase" EXACT [] synonym: "ALAD" EXACT [] synonym: "aminolevulinate dehydratase" EXACT [] synonym: "delta-aminolevulinate dehydratase" EXACT [] xref: CHEBI:12109 "5-aminolevulinate" xref: EC:4.2.1.24 "porphobilinogen synthase" xref: GO:0004655 "porphobilinogen synthase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-13T10:13:09Z [Term] id: SOY:0001906 name: Alpha-amylase activity namespace: soybean_trait def: "The alpha-amylase activity of a plant or plant part." [SOY:001] comment: Map symbol is GmAmy. xref: TO:TO\:0000288 is_a: SOY:0002177 ! Amylase activity created_by: rexnelson creation_date: 2014-06-13T10:21:00Z [Term] id: SOY:0001907 name: Alternative oxidase activity namespace: soybean_trait def: "The alternative oxidase activity of a plant or plant part." [SOY:001] comment: Map symbol is GmAOX. is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-13T10:39:31Z [Term] id: SOY:0001908 name: Acid phosphatase activity namespace: soybean_trait def: "The acid phosphatase activity of a plant or plant part." [SOY:001] xref: TO:TO\:0000705 "acid phosphatase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-13T11:21:10Z [Term] id: SOY:0001909 name: Xyloglucan endotransglycosylase activity namespace: soybean_trait def: "The xyloglucan endotransglycosylase activity of a plant or plant part." [SOY:001] is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-13T11:37:20Z [Term] id: SOY:0001910 name: Nitrate reductase activity namespace: soybean_trait def: "The nitrate reductase activity of a plant or plant part." [GO:0009703, SOY:001] comment: Catalysis of the reaction: nitrite + NAD+ + H2O = nitrate + NADH + H+. xref: EC:1.6.6.1 "nitrate reductase" xref: GO:0009703 "nitrate reductase (NADH) activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-13T11:48:55Z [Term] id: SOY:0001911 name: Chalcone isomerase activity namespace: soybean_trait def: "The chalcone isomerase activity of a plant or plant part." [SOY:001] comment: Map symbol is GmCHI. Converts trihydroxychalcone to dihydroxyflavanone (liquiritigenin) and tetrahydroxychalcone to tetrahydroxyflavanone (naringenin). xref: EC:5.5.1.6 "Chalcone isomerase" xref: GO:0045430 "chalcone isomerase activity" xref: TO:TO\:0000290 "flavonoid content" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-13T13:04:43Z [Term] id: SOY:0001912 name: Chalcone synthase activity namespace: soybean_trait def: "The chalcone synthase activity of a plant or plant part." [SOY:001] comment: Map symbol is GmCHS. Converts coumaroyl-CoA to tetrahydroxy chalcone. synonym: "6'-deoxychalcone synthase" EXACT [EC:2.3.1.74] synonym: "Flavone synthase" EXACT [] synonym: "Naringenin-chalcone synthase" RELATED [] xref: EC:2.3.1.74 "Naringenin-chalcone synthase" xref: GO:0016210 "Chalcone synthase" xref: TO:TO\:0000290 "flavonoid content" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-13T13:07:53Z [Term] id: SOY:0001913 name: Cytochrome C oxidase activity namespace: soybean_trait def: "The cytochrome C oxidase activity of a plant or plant part." [SOY:001] comment: Terminal component of the mitochondrial electron transport chain. is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-13T13:54:08Z [Term] id: SOY:0001914 name: Leghemoglobin content namespace: soybean_trait def: "The leghemoglobin content of a plant or plant part." [SOY:001] xref: GO:0005344 "oxygen transporter activity" xref: GO:0019825 "oxygen binding" xref: GO:0020037 "heme binding" xref: GO:0046872 "metal ion binding" is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rexnelson creation_date: 2014-06-13T13:57:41Z [Term] id: SOY:0001915 name: Seed chlorophyll content namespace: soybean_trait def: "The chlorophyll content of a a seed." [] comment: Chlorophyll can be retained in the seed coat or embryo leaving a yellowish or green dry seed. is_a: SOY:0001858 ! Chlorophyll content created_by: rexnelson creation_date: 2014-06-13T14:00:21Z [Term] id: SOY:0001916 name: Dihydrodipicolinate synthase activity namespace: soybean_trait def: "The dihydrodipicolinate synthase activity of a plant or plant part." [SOY:001] is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-13T14:16:05Z [Term] id: SOY:0001917 name: Dihydroflavonol 4-reductase activity namespace: soybean_trait def: "The dihydroflavonol 4-reductase activity of a plant or plant part." [SOY:001] comment: Catalyzes the reversible reaction, Cis-3,4-leucopelargonidin + NADP(+) <=> (+)-dihydrokaempferol + NADPH. synonym: "DFR" EXACT [] synonym: "Dihydrokaempferol 4-reductase" EXACT [] synonym: "NADPH-dihydromyricetin reductase" EXACT [] synonym: "W3" EXACT [] xref: EC:1.1.1.219 "dihydrokaempferol 4-reductase activity" xref: GO:GO\:0045552 "dihydrokaempferol 4-reductase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-13T14:25:02Z [Term] id: SOY:0001918 name: NADH dehydrogenase activity namespace: soybean_trait def: "The NADH dehydrogenase activity of a plant or plant part." [SOY:001] is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-13T14:37:18Z [Term] id: SOY:0001919 name: Expressed early in nodulation namespace: soybean_trait def: "A protein product that is expressed specifically and early in root nodule formation and development." [SOY:001] comment: This is a collection of proteins that are heterogeneous in function but share an early and high level of expression in root nodules. Often no functional information is available for the proteins and they are referred to simply as ENOD with a number attached. Ex. ENOD40. synonym: "ENOD" NARROW [] is_a: SOY:0001793 ! Root Nodulation created_by: rexnelson creation_date: 2014-06-13T15:22:42Z [Term] id: SOY:0001920 name: Endopeptidase activity namespace: soybean_trait def: "The endopeptidase activity of a plant or plant part." [SOY:001] is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-13T15:32:09Z [Term] id: SOY:0001921 name: Esterase activity namespace: soybean_trait def: "The total esterase activity of a plant or plant part." [] is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-13T15:40:04Z [Term] id: SOY:0001922 name: Urease activity namespace: soybean_trait def: "The urease activity of a plant or plant part." [] comment: An enzymatic activity that converts urea to carbon dioxide and ammonia. xref: GO:0009039 "urease activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-13T15:45:57Z [Term] id: SOY:0001923 name: Flavonoid 3'-hydroxylase activity namespace: soybean_trait def: "Flavonoid 3'-hydroxylase activity of a plant or plant part." [SOY:001] comment: Activity corresponds to the activity of the T locus. A flavonoid + NADPH + O(2) = a 3'-hydroxyflavonoid + NADP(+) + H(2)O. Acts on a number of flavonoids, including naringenin and dihydrokaempferol. synonym: "Flavonoid 3'-monoxygenase" RELATED [] synonym: "Flavonone 3-dioxygenase" EXACT [] synonym: "naringenin 3-dioxygenase" EXACT [] xref: EC:1.14.11.9 "Flavonoid 3'-hydroxylase" xref: GO:0009813 "flavonoid biosynthetic process" xref: GO:0045486 "naringenin 3-dioxygenase activity" xref: TO:0000071 "anthocyanin content" is_a: SOY:0001982 ! Flavonoid hydrolase activity created_by: rexnelson creation_date: 2014-06-13T15:56:36Z [Term] id: SOY:0001924 name: Malonyl-CoA-acyl carrier protein transacylase activity namespace: soybean_trait def: "The malonyl-CoA-acyl carrier protein transacylase activity of a plant or plant part." [] comment: The enzyme catalyzes the conversion of malonyl-CoA to malonyl-CoA via a transacylase reaction. Map symbol is GmFABD. is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-13T16:08:31Z [Term] id: SOY:0001925 name: Delta-twelve fatty acid desaturase activity namespace: soybean_trait def: "The delta-twelve fatty acid desaturase activity of a plant or plant part." [SOY:001] comment: Converts oleic acid to lenoleic acid by a desaturation reaction. is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-13T16:29:36Z [Term] id: SOY:0001926 name: Omega-3 fatty acid desaturase activity namespace: soybean_trait def: "The omega-3 fatty acid desaturase activity of a plant or plant part." [SOY:001] comment: Catalysis of the introduction of an omega-3 double bond into the fatty acid hydrocarbon chain. xref: EC:1.14.19.25 "Acyl-lipid omega-3 desaturase" xref: GO:0042389 "omega-3 fatty acid desturase activity" is_a: SOY:0002193 ! Fatty acid desaturase activity created_by: rexnelson creation_date: 2014-06-13T16:37:09Z [Term] id: SOY:0001927 name: Flavanone content namespace: soybean_trait def: "The flavanone content of a plant or plant part." [SOY:001] comment: These are principally the compounds liquiritgenin and naringenein. is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rexnelson creation_date: 2014-06-16T13:21:46Z [Term] id: SOY:0001928 name: Seed flavanone content namespace: soybean_trait def: "The flavanone content of a seed." [SOY:001] is_a: SOY:0001927 ! Flavanone content created_by: rexnelson creation_date: 2014-06-16T13:25:45Z [Term] id: SOY:0001929 name: Seed liquiritgenin content namespace: soybean_trait def: "The amount of liquiritgenin in a seed." [SOY:001] is_a: SOY:0001928 ! Seed flavanone content created_by: rexnelson creation_date: 2014-06-16T13:26:36Z [Term] id: SOY:0001930 name: Seed naringenin content namespace: soybean_trait def: "The amount of naringenin in a seed." [SOY:001] is_a: SOY:0001928 ! Seed flavanone content created_by: rexnelson creation_date: 2014-06-16T13:27:50Z [Term] id: SOY:0001931 name: Flavonol content namespace: soybean_trait def: "The amount of flavonol compound in a plant or plant part." [SOY:001] is_a: SOY:0001927 ! Flavanone content created_by: rexnelson creation_date: 2014-06-16T14:21:52Z [Term] id: SOY:0001932 name: Seed flavonol content namespace: soybean_trait def: "The amount of flavonols in a seed." [SOY:001] is_a: SOY:0001931 ! Flavonol content created_by: rexnelson creation_date: 2014-06-16T14:23:42Z [Term] id: SOY:0001933 name: Leaflet flavonol content namespace: soybean_trait def: "The amount of flavonols in a leaflet." [SOY:001] is_a: SOY:0001931 ! Flavonol content created_by: rexnelson creation_date: 2014-06-16T14:27:24Z [Term] id: SOY:0001934 name: Flower flavonol content namespace: soybean_trait def: "The flavonol content of a flower or flowers." [SOY:001] is_a: SOY:0001931 ! Flavonol content created_by: rexnelson creation_date: 2014-06-16T14:31:18Z [Term] id: SOY:0001935 name: Trichome flavonol content namespace: soybean_trait def: "The flavonol content of trichomes." [SOY:001] is_a: SOY:0001931 ! Flavonol content created_by: rexnelson creation_date: 2014-06-16T14:31:45Z [Term] id: SOY:0001936 name: Proanthocyanidin content namespace: soybean_trait def: "The amount of proanthocyanidins, in a plant or plant part." [SOY:001] is_a: SOY:0001927 ! Flavanone content created_by: rexnelson creation_date: 2014-06-16T14:34:37Z [Term] id: SOY:0001937 name: Anthocyanidin content namespace: soybean_trait def: "The amount of anthocyanidins in a plant or plant part." [SOY:001] is_a: SOY:0001936 ! Proanthocyanidin content created_by: rexnelson creation_date: 2014-06-16T14:39:19Z [Term] id: SOY:0001938 name: Root fluorescence namespace: soybean_trait def: "Fluorescence of the root under UV illumination." [SOY:001] is_a: SOY:0001732 ! Root Morphology created_by: rexnelson creation_date: 2014-06-16T15:13:43Z [Term] id: SOY:0001939 name: Apyrase activity namespace: soybean_trait def: "The nucleotide phosphohydrolase activity of a plant or plant part." [SOY:001] is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-16T15:54:34Z [Term] id: SOY:0001940 name: Expressed during nodulation namespace: soybean_trait def: "A protein product that is expressed specifically in nodules after the initial formation of the nodule." [SOY:001] comment: These are an undefined heterogenous set of transcripts that are specifically expressed in root nodules after the intitial formation of the nodule. synonym: "NOD" EXACT [] is_a: SOY:0001793 ! Root Nodulation created_by: rexnelson creation_date: 2014-06-17T08:59:54Z [Term] id: SOY:0001941 name: Nitrate assemilation namespace: soybean_trait def: "The processes involved in absorbing and assemilating nitrate by a plant or plant part." [SOY:001] xref: TO:TO\:0020099 "nitrate transport" xref: TO:TO\:0020100 "The total nitrate ion uptake measured in a plant or a plant part." is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rexnelson creation_date: 2014-06-17T09:16:54Z [Term] id: SOY:0001942 name: phosphoenolpyruvate carboxylase activity namespace: soybean_trait def: "The phosphoenolpyruvate activity of a plant or plant part." [SOY:001] comment: PEPC is a multimeric enzyme composed of two sets of homodiamers. Catalyzes the reaction of Phosphate + oxaloacetate <=> H(2)O + phosphoenolpyruvate + HCO(3)(-). synonym: "PEPC" EXACT [] xref: EC:4.1.1.31 "Phosphoenolpyruvate carboxylase" xref: GO:0008964 "phosphoenolpyruvate carboxylase activity" xref: GO:0015977 "carbon fixation" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-17T09:32:12Z [Term] id: SOY:0001943 name: Carbon fixation namespace: soybean_trait def: "The process of fixing carbon dioxide into glyceraldehyde-3-phosphate." [] is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rexnelson creation_date: 2014-06-17T09:43:35Z [Term] id: SOY:0001944 name: Peribacteroid zinc ion transporter activity namespace: soybean_trait def: "Causes the transfer of zinc ions across the peribacteroid membrane." [SOY:001] xref: GO:GO\:0005385 "Zinc ion transmembrane transporter activity" xref: PO:PO\:0003023 "root nodule" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-17T11:21:17Z [Term] id: SOY:0001945 name: RNA polymerase II activity namespace: soybean_trait def: "The RNA polymerase II activity of a plant or plant part." [] synonym: "RNPII" EXACT [] xref: EC:2.7.7.6 "DNA-directed RNA polymerase" xref: GO:0006366 "transcription from RNA polymerase II promoter" xref: GO:GO\:0001055 "RNA polymerase II activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-17T11:35:11Z [Term] id: SOY:0001946 name: Glutamate oxaloacetate transaminase activity namespace: soybean_trait def: "The glutamate oxaloacetate activity of a plant or plant part." [] comment: Catalyzes the conversion of aspartate and oxogluatrate to oxaloacetate and glutamate. xref: GO:GO\:0004069 "L-aspartate:2-oxoglutarate aminotransferase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-17T11:38:28Z [Term] id: SOY:0001947 name: Glucose-6-phosphate dehydrogenase activity namespace: soybean_trait def: "The glucose-6-phosphpate dehydrogenase activity of a plant or plant part." [SOY:001] comment: Map symbol is Gpd. xref: GO:GO\:0004345 "glucose-6-phosphate dehydrogenase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-17T11:49:35Z [Term] id: SOY:0001948 name: Glutamine synthetase activity namespace: soybean_trait def: "The glutamine synthetase activity of a plant or plant part." [SOY:001] comment: Catalyzes the reaction ATP + L-glutamate + NH3 = ADP + phosphate + L-glutamine. This reaction is part of the chemical reactions and pathways resulting in the formation of glutamine, 2-amino-4-carbamoylbutanoic acid. synonym: "glutamate-ammonia ligase activity" NARROW [] synonym: "GS" EXACT [] xref: EC:6.3.1.2 "Glutamine synthetase" xref: GO:0006542 "glutamine biosynthetic process" xref: GO:GO\:0004356 "glutamate-ammonia ligase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-17T12:58:58Z [Term] id: SOY:0001949 name: Glutamyl-tRNA reductase activity namespace: soybean_trait def: "The glutamyl-tRNA reductase activity of a plant or plant part." [SOY:001] xref: GO:GO\:0008883 "glutamyl-tRNA reductase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-17T13:05:22Z [Term] id: SOY:0001950 name: Glutamate-1-semialdehyde aminotransferase activity namespace: soybean_trait def: "The glutamate-1-semialdehyde aminotransferase activity of a plant or plant part." [] comment: Catalyzes the reaction (S)-4-amino-5-oxopentanoate <=> 5-aminolevulinate. Uses pyridoxal 5'-phosphate as a cofactor. This activity is involved in the pathway chlorophyll biosynthesis, which is part of Porphyrin-containing compound metabolism. xref: EC:5.4.3.8 "Glutamate-1-semialdehyde 2,1-aminomutase" xref: GO:0006782 "protoporphyrinogen IX biosyntheitic process" xref: GO:0015995 "chlorphyll biosynthetic process" xref: GO:0030170 "pyridoxal phosphate binding" xref: GO:GO\:0042286 "glutamate-1-semialdehyde 2,1-aminomutase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-17T13:12:27Z [Term] id: SOY:0001951 name: Sulfonylurea herbicide sensitivity namespace: soybean_trait def: "Sensitivity of a plant or plant part to exposure to sulfonylurea herbicides." [SOY:001] is_a: SOY:0001814 ! Herbicide sensitivity created_by: rexnelson creation_date: 2014-06-17T14:08:27Z [Term] id: SOY:0001952 name: Triazinone herbicide sensitivity namespace: soybean_trait def: "The sensitivity of a plant or plant part to exposure to triazinone herbicides." [SOY:001] is_a: SOY:0001814 ! Herbicide sensitivity created_by: rexnelson creation_date: 2014-06-17T14:11:25Z [Term] id: SOY:0001953 name: Dinitroaniline herbicide sensitivity namespace: soybean_trait def: "The sensitivity of a plant or plant part to exposure to dinitroaniline herbicides." [SOY:001] is_a: SOY:0001814 ! Herbicide sensitivity created_by: rexnelson creation_date: 2014-06-17T14:13:08Z [Term] id: SOY:0001954 name: Anilide herbicide sensitivity namespace: soybean_trait def: "Sensitivity of a plant or plant part to exposure to anilide herbicides." [SOY:001] is_a: SOY:0001814 ! Herbicide sensitivity created_by: rexnelson creation_date: 2014-06-17T14:16:10Z [Term] id: SOY:0001955 name: Isocitrate dehydrogenase activity namespace: soybean_trait def: "The isocitrate dehydrogenase activity of a plant or plant part." [SOY:001] synonym: "IDH" RELATED [] xref: GO:GO\:0004448 "isocitrate dehydrogenase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-17T14:28:51Z [Term] id: SOY:0001956 name: Seed coat saddle namespace: soybean_trait def: "The presence of a distinct saddle around the hilum in the seed coat." [SOY:001] comment: This trait manifests itself as a darker tan zone around the hilum. This is called the saddle. is_a: SOY:0001409 ! Soybean Quality Traits created_by: rexnelson creation_date: 2014-06-17T14:34:56Z [Term] id: SOY:0001957 name: Seed Kunitz trypsin inhibitor activity namespace: soybean_trait def: "The kunitz trypsin inhibitor activity of a seed." [] comment: Symbol is KTI. xref: GO:GO\:0004867 "serine-type endopeptidase inhibitor activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-17T14:42:10Z [Term] id: SOY:0001958 name: linoleate 9S-lipoxygenase activity namespace: soybean_trait def: "The linoleate 9S-lipoxygenase activity of a plant or plant part." [EC:EC\:1.13.11.58, SOY:001] comment: Catalysis of the reaction: linoleate + O2 = (9S,10E,12Z)-9-hydroperoxy-10,12-octadecadienoate. Can oxidize linoleate and alpha-linoleate at the C(9) postion with S-configuration. synonym: "9-lipoxygenase" EXACT [] synonym: "9S-lipoxygenase" EXACT [] synonym: "Linoleate 9-lipoxygenase" EXACT [] xref: EC:1.13.11.58 "Linoleate 9S-lipoxygenase" xref: GO:GO\:1990136 "linoleate 9S-lipoxygenase activity" is_a: SOY:0001962 ! Lipoxygenase activity created_by: rexnelson creation_date: 2014-06-17T15:37:17Z [Term] id: SOY:0001959 name: linoleate 13S-lipoxygenase activity namespace: soybean_trait def: "The linoleate 13S-lipoxygenase activity of a plant or plant part." [EC:EC\:1.13.11.12, SOY:001] comment: Catalysis of the reaction: linoleate + O2 = (9Z,11E)-(13S)-13-hydroperoxyoctadeca-9,11-dienoate. Also catalyzes the reaction: Alpha-linolenate + O(2) <=> (9Z,11E,13S,15Z)-13-hydroperoxyoctadeca-9,11,15-trienoate. synonym: "13-lipoperoxidase" EXACT [EC:1.13.11.12] synonym: "13-lipoxidase" EXACT [] synonym: "Carotene oxidase" EXACT [EC:1.13.11.12] synonym: "Lipoperoxidase" EXACT [EC:1.13.11.12] synonym: "Lipoxidase" EXACT [] xref: EC:1.13.11.12 "Linolate 13S-lipoxygenase" xref: GO:GO\:0016165 "linoleate 13S-lipoxygenase activity" is_a: SOY:0001962 ! Lipoxygenase activity created_by: rexnelson creation_date: 2014-06-17T15:40:32Z [Term] id: SOY:0001960 name: Leucyl aminopeptidase activity namespace: soybean_trait def: "The leucyl aminopeptidase activity of a plant or plant part." [EC:EC\:3.4.11.1] synonym: "LAP" RELATED [] xref: GO:GO\:0008235 "metalloexopeptidase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-17T16:01:29Z [Term] id: SOY:0001961 name: Seed lectin content namespace: soybean_trait def: "The amount of lectin in a seed." [SOY:001] comment: Can be expressed as a percentage of total protein or an absolute amount. synonym: "seed storage protein" RELATED [] is_a: SOY:0001676 ! Seed protein content created_by: rexnelson creation_date: 2014-06-18T09:42:55Z [Term] id: SOY:0001962 name: Lipoxygenase activity namespace: soybean_trait def: "The lipoxygenase activity of a plant or plant part." [SOY:001] comment: The combined lipoxygenase activity of all classes of lipoxygenase. xref: GO:0016702 "oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-18T10:48:22Z [Term] id: SOY:0001963 name: Malate dehydrogenase activity namespace: soybean_trait def: "The malate dehydrogenase activity of a plant or plant part." [SOY:001] comment: (S)-malate + NAD+ = oxaloacetate + NADH + H+. Different cellular compartments have distinct MDH activities. xref: EC:EC\:1.1.1.37 "malate dehydrogenase" xref: GO:0016615 "malate dehydrogenase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-18T10:54:56Z [Term] id: SOY:0001964 name: Mannose-6-phosphate isomerase activity namespace: soybean_trait def: "The mannose-6-phosphate isomerase activity of a plant or plant part." [SOY:001] comment: D-Mannose 6-phosphate is converted by an isomerization reaction to D-fructose 6-phosphate. xref: EC:EC\:5.3.1.8 "Mannose-6-phosphate isomerase" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-18T11:13:23Z [Term] id: SOY:0001965 name: Nitrate repression of nodulation namespace: soybean_trait def: "The nodule formation repression due to elevated concentration of nitrate in the growth medium." [SOY:001] comment: Nodule formation is negatively regulated by available nitrate in the growth medium. xref: GO:GO\:0009878 "nodule morphogenesis" is_a: SOY:0001793 ! Root Nodulation created_by: rexnelson creation_date: 2014-06-18T15:10:06Z [Term] id: SOY:0001966 name: phytoene desaturase activity namespace: soybean_trait def: "The phytoene desaturase activity of a plant or plant part." [SOY:001] comment: Participates in the multi-step conversion of phytoene to all-trans-zeta-carotene. 15-cis-phytoene + 2 plastoquinone = 9,15,9'-tri-cis-zeta-carotene + 2 plastoquinol. xref: EC:EC\:1.3.99.28 "phytoene desaturase" xref: GO:0016117 "carotenoid biosynthetic process" xref: GO:0016166 "phytoene dehydrogenase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-18T15:57:41Z [Term] id: SOY:0001967 name: 6-phosphogluconate dehydratase activity namespace: soybean_trait def: "The 6-phosphogluconate dehydratase activity of a plant or plant part." [] comment: Catalyzes the conversion of 6-phospho-D-gluconate to 2-dehydro-3-deoxy-6-6phospho-D-gluconate. Map symbol is GND. xref: EC:EC\:4.2.1.12 "phosphogluconate dehydratase" xref: GO:GO\:0004456 "phosphogluconate dehydratase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-19T07:32:35Z [Term] id: SOY:0001968 name: Glucose-6-phosphate isomerase activity namespace: soybean_trait def: "The glucose-6-phosphate isomerase activity of a plant or plant part." [SOY:001] comment: Catalyzes the isomeration of glucose-6-phosphate to fructose-6-phosphate. Map symbol is xref: EC:EC\:5.3.1.9 "Glucose-6-phosphate isomerase" xref: GO:GO\:0004347 "Glucose-6-phosphate isomerase" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-19T07:41:22Z [Term] id: SOY:0001969 name: Phosphoglucomutase activity namespace: soybean_trait def: "The phosphoglucomutase activity of a plant or plant part." [] comment: Catalyzes the conversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate. Map symbol is PGM. synonym: "PGM" EXACT [] xref: EC:EC\:5.4.2.2 "phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent)" xref: GO:GO\:0004614 "phosphoglucomutase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-19T09:29:23Z [Term] id: SOY:0001970 name: Protein tyrosine phosphatase activity namespace: soybean_trait def: "The protein tyrosine phosphatase activity of a plant or plant part." [SOY:001] comment: Catalyzes the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate. xref: EC:3.1.3.48 "protein-tyrosine-phosphatase" xref: GO:GO\:0004725 "protein tyrosine phosphatase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-19T10:51:55Z [Term] id: SOY:0001971 name: Seed surface form namespace: soybean_trait def: "The surface morphology of a seed." [] comment: Possible values are smooth, wrinkled or shriveled. synonym: "Shr" EXACT [] xref: PO:PO\:0009010 "seed" is_a: SOY:0001409 ! Soybean Quality Traits created_by: rexnelson creation_date: 2014-06-19T11:53:02Z [Term] id: SOY:0001972 name: Seed coat subtilisin activity namespace: soybean_trait def: "Subtilisin activity in seed coat tissue." [SOY:001] comment: May be involved in nutrient transfer from the mother plant. Map symbol is SCS1. xref: EC:342162 "Subtilisin" xref: PO:PO\:0009010 "seed" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-19T12:00:49Z [Term] id: SOY:0001973 name: Superoxide dismutase activity namespace: soybean_trait def: "The superoxide dismutase activity of a plant or plant part." [] comment: Map symbol is SOD. synonym: "SOD" EXACT [] xref: EC:1.15.1.1 "superoxide dismutase" xref: GO:GO\:0004784 "Superoxide dismutase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-19T13:36:40Z [Term] id: SOY:0001974 name: flavonoid 3'5'-hydroxylase activity namespace: soybean_trait def: "The flavonoid 3'5'-hydroxylase activity of a plant or plant part." [SOY:001] comment: Map symbol is F3',5'H. Catalyzes the conversion of a flavonone to a 3',5'-hydroxyflavanone. synonym: "" RELATED [] synonym: "W" EXACT [] xref: EC:1.14.13.21 "Flavonoid 3',5'-hydroxylase" xref: GO:GO\:0033772 "flavonoid 3'5'-hydroxylase activity" is_a: SOY:0001982 ! Flavonoid hydrolase activity created_by: rexnelson creation_date: 2014-06-19T13:53:58Z [Term] id: SOY:0001975 name: Flavonone 3-hydroxylase activity namespace: soybean_trait def: "The naringenin 3-dioxygenase activity of a plant or plant part." [SOY:001] comment: Catalyzes the conversion of naringenin and oxoglutarate to dihydrokaempferol and succinate. Map symbol if F3H. synonym: "Wp" EXACT [] xref: EC:1.14.11.9 "Flavanone 3-dioxygenase" xref: GO:GO\:0045486 "naringenin 3-dioxygenase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-19T14:00:03Z [Term] id: SOY:0001976 name: Flavonol synthase activity namespace: soybean_trait def: "The flavonol synthase activity in a plant or plant part." [SOY:001] comment: Catalyzes the conversion of a dihydroflavonol and 2-glutarate to a flavonol and succinate. Map symbol is Wm. synonym: "Wm" EXACT [] xref: EC:1.14.11.23 "flavonol synthase" xref: GO:0045431 "flavonol synthase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-06-19T14:20:06Z [Term] id: SOY:0001977 name: Pubescence stature namespace: soybean_trait def: "The stature of the pubescence on a plant or plant part." [SOY:001] comment: Stature can be "oppressed", "semi-oppressed" or "upright". Oppressed pubescence stand at an acute angle to the plant surface almost parallel to the surface. Semi-oppressed pubescence stand at nearly a 45 degrees to the surface and upright pubescence stand at nearly 90 degrees to the surface. is_a: SOY:0001718 ! Pubescence Traits created_by: rexnelson creation_date: 2014-06-20T13:11:18Z [Term] id: SOY:0001978 name: Seed length to height ratio namespace: soybean_trait def: "The ratio of the seed length divided by the seed height." [DOI:10.1007/s11032-012-9833-5, SOY:001] synonym: "Seed length to thickness ratio" RELATED [DOI:10.1007/s11032-012-9833-5] xref: PO:PO\:0009010 "seed" is_a: SOY:0001600 ! Seed size created_by: rexnelson creation_date: 2014-07-03T09:42:12Z [Term] id: SOY:0001979 name: Seed length to width ratio namespace: soybean_trait def: "The ratio of the seed length divided by the seed width." [DOI:10.1007/s11032-012-9833-5] xref: PO:PO\:0009010 "Seed" is_a: SOY:0001600 ! Seed size created_by: rexnelson creation_date: 2014-07-03T09:47:07Z [Term] id: SOY:0001980 name: Seed width to height ratio namespace: soybean_trait def: "The ratio of the seed width divided by the seed height." [DOI:10.1007/s11032-012-9833-5, SOY:001] synonym: "Seed width to thickness ratio" RELATED [DOI:10.1007/s11032-012-9833-5] xref: PO:PO\:0009010 "seed" is_a: SOY:0001600 ! Seed size created_by: rexnelson creation_date: 2014-07-03T09:48:10Z [Term] id: SOY:0001981 name: Leaflet thickness namespace: soybean_trait def: "The distance from the adaxial to the abaxial surface of a leaflet measured at the thickest part of the leaflet lamina." [SOY:001] is_a: SOY:0001637 ! Leaflet Morphology created_by: rexnelson creation_date: 2014-07-18T14:16:32Z [Term] id: SOY:0001982 name: Flavonoid hydrolase activity namespace: soybean_trait def: "The flavonoid hydrolase activity of a plant or plant part." [SOY:001] comment: Catalysis of the reaction: a flavonoid + NADPH + H+ + O2 = 3'-hydroxyflavonoid + NADP+ + H2O. is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2014-10-16T10:18:54Z [Term] id: SOY:0001983 name: Leaflet growth and development traits namespace: soybean_trait def: "Growth and developmental traits of leaflets." [SOY:001] is_a: SOY:0001408 ! Soybean Growth and Development Traits created_by: rexnelson creation_date: 2014-10-22T10:21:11Z [Term] id: SOY:0001984 name: Root growth and development traits namespace: soybean_trait def: "Growth and developmental traits of roots." [SOY:001] is_a: SOY:0001408 ! Soybean Growth and Development Traits created_by: rexnelson creation_date: 2014-10-22T10:23:57Z [Term] id: SOY:0001985 name: Flower morphology and anatomy traits namespace: soybean_trait def: "The morphology and anatomical traits of a flower." [SOY:001] is_a: SOY:0001398 ! Soybean Morphology and Anatomy Traits created_by: rexnelson creation_date: 2014-10-22T10:25:15Z [Term] id: SOY:0001986 name: Somatic embryo growth and development namespace: soybean_trait def: "The development traits of a somatic embryo." [SOY:001] is_a: SOY:0001408 ! Soybean Growth and Development Traits created_by: rexnelson creation_date: 2014-10-22T10:43:19Z [Term] id: SOY:0001987 name: Pod growth and development traits namespace: soybean_trait def: "Traits associated with the growth and development of a pod." [SOY:001] is_a: SOY:0001408 ! Soybean Growth and Development Traits created_by: rexnelson creation_date: 2014-10-22T10:45:05Z [Term] id: SOY:0001988 name: Cysteine protease activity namespace: soybean_trait def: "The cysteine protease activity of a plant or plant part." [SOY:001] is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2015-01-28T13:23:48Z [Term] id: SOY:0001989 name: Seed cystatin content namespace: soybean_trait def: "The cystatin content of seeds or seed parts." [SOY:001] is_a: SOY:0001676 ! Seed protein content created_by: rexnelson creation_date: 2015-01-28T14:25:15Z [Term] id: SOY:0001990 name: Cotyledon Morphology namespace: soybean_trait def: "The morphology of the cotyledon." [SOY:001] is_a: SOY:0001398 ! Soybean Morphology and Anatomy Traits created_by: rexnelson creation_date: 2015-08-31T15:21:32Z [Term] id: SOY:0001991 name: Reaction to Ophiomyia species namespace: soybean_trait def: "Reaction of the plant or plant part to feeding by members of the Ophiomyia speces." [SOY:001] is_a: SOY:0001371 ! Reaction to insect created_by: rexnelson creation_date: 2015-08-31T16:16:01Z [Term] id: SOY:0001992 name: Reaction to Tetranychus species namespace: soybean_trait def: "Reaction of a plant or plant part to feeding by Tetranychus species." [SOY:001] is_a: SOY:0001371 ! Reaction to insect created_by: rexnelson creation_date: 2015-08-31T17:02:10Z [Term] id: SOY:0001993 name: Seed viability namespace: soybean_trait def: "The viability of a seed after storage or treatment." [SOY:001] xref: TO:0000345 "seed viability" is_a: SOY:0001412 ! Soybean Fertility or Sterility Traits created_by: rexnelson creation_date: 2016-08-19T14:07:13Z [Term] id: SOY:0001994 name: Leaf structures namespace: soybean_structure def: "Structures associated with a soybean leaf." [SOY:001] xref: PO:PO\:0025034 "Leaf" is_a: SOY:0000098 ! Soybean Structure Terms created_by: rexnelson creation_date: 2015-10-14T10:59:55Z [Term] id: SOY:0001995 name: Leaflet namespace: soybean_structure def: "One of the segments of the trifoliate leaf." [SOY:001] xref: PO:PO\:0020049 "Leaflet" is_a: SOY:0001994 ! Leaf structures created_by: rexnelson creation_date: 2015-10-14T11:02:56Z [Term] id: SOY:0001996 name: Petiolule namespace: soybean_structure def: "The stalk of a leaflet. Originates from the petiole." [SOY:001] xref: PO:PO\:0020050 "Petiolule" is_a: SOY:0001994 ! Leaf structures created_by: rexnelson creation_date: 2015-10-14T11:07:03Z [Term] id: SOY:0001997 name: Petiole namespace: soybean_structure def: "Stalk of trifoliate or unifoliate leaf." [SOY:001] xref: PO:PO\:0020038 "Petiole" is_a: SOY:0001994 ! Leaf structures created_by: rexnelson creation_date: 2015-10-14T11:09:02Z [Term] id: SOY:0001998 name: Response to Bradyrhizobium japonicum lipochitooligosaccharide namespace: soybean_trait def: "Reaction of the plant or plant part to B. japonicum lipochitooligosaccharide." [SOY:001] synonym: "LCO" EXACT [] synonym: "Nod factor" EXACT [] is_a: SOY:0001819 ! Response to Bradyrhizobium japonicum. created_by: rexnelson creation_date: 2015-10-14T16:02:51Z [Term] id: SOY:0001999 name: Embryo namespace: soybean_structure def: "Embryonic plant in a seed." [SOY:001] xref: PO:PO\:0000001 "Plant embryo proper" is_a: SOY:0001632 ! Seed Structures created_by: rexnelson creation_date: 2015-10-14T16:33:31Z [Term] id: SOY:0002000 name: Embryo axis namespace: soybean_structure def: "The axial part of an embryo composed of the plumule, epicotyl, hypocotyl and radicle." [SOY:001] xref: PO:PO\:0019018 "Plant embryo axis" is_a: SOY:0001999 ! Embryo created_by: rexnelson creation_date: 2015-10-14T16:40:15Z [Term] id: SOY:0002001 name: Cotyledon namespace: soybean_structure def: "Seed leaves of the embryo." [SOY:001] xref: PO:PO\:0025470 "Plant embryo cotyledon" is_a: SOY:0001999 ! Embryo created_by: rexnelson creation_date: 2015-10-15T08:16:48Z [Term] id: SOY:0002002 name: Hypocotyl namespace: soybean_structure def: "Stem of the germinating seed. Bounded by the cotyledons and radical." [SOY:001] xref: PO:PO\:0025290 is_a: SOY:0002000 ! Embryo axis created_by: rexnelson creation_date: 2015-10-15T08:22:17Z [Term] id: SOY:0002003 name: Plumule namespace: soybean_structure def: "Vegetative tissue of an embryonic axis above the coyledonary node, consisting of unifoliate tissue and the shoot apical meristem." [SOY:001] xref: PO:PO\:0020032 "Plumule" is_a: SOY:0002000 ! Embryo axis created_by: rexnelson creation_date: 2015-10-15T08:29:26Z [Term] id: SOY:0002004 name: Embryo root meristem namespace: soybean_structure def: "The root apical meristematic tissue at the tip of the embryonic radical." [SOY:001] xref: PO:PO\:0006081 "Primary root apical meristem" is_a: SOY:0002000 ! Embryo axis created_by: rexnelson creation_date: 2015-10-15T08:49:50Z [Term] id: SOY:0002005 name: Radicle namespace: soybean_structure def: "The embryonic root tissue below the hypocotyl." [SOY:001] xref: PO:PO\:0020031 "Radicle" is_a: SOY:0002000 ! Embryo axis created_by: rexnelson creation_date: 2015-10-15T08:52:30Z [Term] id: SOY:0002006 name: Cotyledonary abaxial epidermis namespace: soybean_structure def: "The epidermis found on the abaxial side of the cotyledon." [SOY:001] is_a: SOY:0002001 ! Cotyledon created_by: rexnelson creation_date: 2015-10-15T09:17:00Z [Term] id: SOY:0002007 name: Cotyledonary adaxial epidermis namespace: soybean_structure def: "The epidermal tissue on the adaxial side of a cotyledon." [SOY:001] is_a: SOY:0002001 ! Cotyledon created_by: rexnelson creation_date: 2015-10-15T09:18:55Z [Term] id: SOY:0002008 name: Cotyledonary abaxial parenchyma namespace: soybean_structure def: "Parenchymal cells associated with the abaxial side of the cotyledon." [SOY:001] is_a: SOY:0002001 ! Cotyledon created_by: rexnelson creation_date: 2015-10-15T09:23:34Z [Term] id: SOY:0002009 name: Cotyledonary adaxial parenchyma namespace: soybean_structure def: "Parenchymal cells associated with the adaxial side of the cotyledon." [SOY:001] is_a: SOY:0002001 ! Cotyledon created_by: rexnelson creation_date: 2015-10-15T09:24:56Z [Term] id: SOY:0002010 name: Embryo axis epidermis namespace: soybean_structure def: "The epidermis found on the embryo axis." [SOY:001] is_a: SOY:0002000 ! Embryo axis created_by: rexnelson creation_date: 2015-10-15T09:26:08Z [Term] id: SOY:0002011 name: Seed coat aleurone namespace: soybean_structure def: "The seed coat tissue composed of aleurone cells. Found between the seed coat arenchyma and embryo." [] is_a: SOY:0001635 ! Seed Coat created_by: rexnelson creation_date: 2015-10-15T09:29:40Z [Term] id: SOY:0002012 name: Seed coat hourglass namespace: soybean_structure def: "The tissue of the seed coat composed of hourglass cells. The hourglass layer is bounded by seed coat palisade and parenchyma tissue." [SOY:001] is_a: SOY:0001635 ! Seed Coat created_by: rexnelson creation_date: 2015-10-15T09:36:17Z [Term] id: SOY:0002013 name: Seed coat palisade namespace: soybean_structure def: "Palisade cells associated with the seed coat. Bounded by the cuticular layer and the hourglass layer." [SOY:001] is_a: SOY:0001635 ! Seed Coat created_by: rexnelson creation_date: 2015-10-15T09:43:05Z [Term] id: SOY:0002014 name: Seed coat parenchyma namespace: soybean_structure def: "Parenchymal cells associated with the seed coat. Bounded by the hourglass and aleurone layers." [SOY:001] is_a: SOY:0001635 ! Seed Coat created_by: rexnelson creation_date: 2015-10-15T09:47:11Z [Term] id: SOY:0002015 name: Suspensor namespace: soybean_structure def: "Tissue of embryonic origin that connects the embryo to the seed coat. It is derived from the basal cell of the two-celled pro-embryo." [SOY:001] is_a: SOY:0001632 ! Seed Structures created_by: rexnelson creation_date: 2015-10-15T10:04:51Z [Term] id: SOY:0002016 name: Embryo axis parenchyma namespace: soybean_structure def: "Parenchymal cells associated with the embryo axis." [] is_a: SOY:0002000 ! Embryo axis created_by: rexnelson creation_date: 2015-10-15T10:17:05Z [Term] id: SOY:0002017 name: Embryo axis shoot apical meristem namespace: soybean_structure def: "Shoot apical meristematic tissue found in the root axis." [SOY:001] is_a: SOY:0002000 ! Embryo axis created_by: rexnelson creation_date: 2015-10-15T10:19:24Z [Term] id: SOY:0002018 name: Embryo axis vascular bundle namespace: soybean_structure def: "Vascular tissue associated with the embryo axis." [SOY:001] is_a: SOY:0002000 ! Embryo axis created_by: rexnelson creation_date: 2015-10-15T10:20:47Z [Term] id: SOY:0002019 name: Seed coat epidermis namespace: soybean_structure def: "Epidermal tissue associated with the seed coat. Bounded by the cuticular layer and outer integument." [SOY:001] is_a: SOY:0001635 ! Seed Coat created_by: rexnelson creation_date: 2015-10-15T10:24:21Z [Term] id: SOY:0002020 name: Seed coat outer integument namespace: soybean_structure def: "Component of the developing embryo seed coat. Bounded by the seed coat epidermal layer and inner integument layer." [SOY:001] comment: Derived from the ovule. is_a: SOY:0001635 ! Seed Coat created_by: rexnelson creation_date: 2015-10-15T10:26:12Z [Term] id: SOY:0002021 name: Seed coat inner integument namespace: soybean_structure def: "Component of the developing embryo seed coat. Bounded by the seed coat outer integument layer and endothelial layer." [SOY:001] comment: Derived from the ovule. is_a: SOY:0001635 ! Seed Coat created_by: rexnelson creation_date: 2015-10-15T10:31:21Z [Term] id: SOY:0002022 name: Seed coat endothelium namespace: soybean_structure def: "Component of the seed coat bounded by the inner integument and endosperm tissues." [SOY:001] is_a: SOY:0001635 ! Seed Coat created_by: rexnelson creation_date: 2015-10-15T10:34:25Z [Term] id: SOY:0002023 name: Seed endosperm namespace: soybean_structure def: "Cells derived from the fusion of a sperm nuclei with polar nuclei of the embryo sac. The endosperm is bounded by the seed coat endothelium and the developing embryo." [SOY:001] is_a: SOY:0001632 ! Seed Structures created_by: rexnelson creation_date: 2015-10-15T10:50:10Z [Term] id: SOY:0002024 name: Cotyledon vascular bundle namespace: soybean_structure def: "Vascular tissue associated with a cotyledon." [SOY:001] is_a: SOY:0002001 ! Cotyledon created_by: rexnelson creation_date: 2015-10-15T11:27:42Z [Term] id: SOY:0002025 name: Structural metamers namespace: soybean_structure def: "Itemization of the individual metamers that compose a plant." [SOY:001] is_a: SOY:0000098 ! Soybean Structure Terms created_by: rexnelson creation_date: 2015-10-19T12:35:19Z [Term] id: SOY:0002026 name: Main stem metamers namespace: soybean_structure is_a: SOY:0002025 ! Structural metamers created_by: rexnelson creation_date: 2015-10-19T12:37:01Z [Term] id: SOY:0002027 name: Axilliary stem metamers namespace: soybean_structure is_a: SOY:0002025 ! Structural metamers created_by: rexnelson creation_date: 2015-10-19T12:38:03Z [Term] id: SOY:0002028 name: Shoot structures namespace: soybean_structure is_a: SOY:0000098 ! Soybean Structure Terms created_by: rexnelson creation_date: 2015-10-19T12:43:01Z [Term] id: SOY:0002029 name: Shoot apical meristem namespace: soybean_structure is_a: SOY:0002028 ! Shoot structures created_by: rexnelson creation_date: 2015-10-19T12:47:15Z [Term] id: SOY:0002030 name: Flower structures namespace: soybean_structure is_a: SOY:0000098 ! Soybean Structure Terms created_by: rexnelson creation_date: 2015-10-19T15:40:04Z [Term] id: SOY:0002031 name: Petal namespace: soybean_structure is_a: SOY:0002048 ! Perianth created_by: rexnelson creation_date: 2015-10-19T15:40:31Z [Term] id: SOY:0002032 name: Sepal namespace: soybean_structure is_a: SOY:0002048 ! Perianth created_by: rexnelson creation_date: 2015-10-19T15:40:48Z [Term] id: SOY:0002033 name: Stamen namespace: soybean_structure is_a: SOY:0002030 ! Flower structures created_by: rexnelson creation_date: 2015-10-19T15:41:20Z [Term] id: SOY:0002034 name: Pistil namespace: soybean_structure is_a: SOY:0002030 ! Flower structures created_by: rexnelson creation_date: 2015-10-19T15:41:41Z [Term] id: SOY:0002035 name: Anther namespace: soybean_structure is_a: SOY:0002033 ! Stamen created_by: rexnelson creation_date: 2015-10-19T15:42:20Z [Term] id: SOY:0002036 name: Filament namespace: soybean_structure is_a: SOY:0002033 ! Stamen created_by: rexnelson creation_date: 2015-10-19T15:42:37Z [Term] id: SOY:0002037 name: Microsporangium namespace: soybean_structure is_a: SOY:0002033 ! Stamen created_by: rexnelson creation_date: 2015-10-19T15:43:53Z [Term] id: SOY:0002038 name: Stigma namespace: soybean_structure is_a: SOY:0002034 ! Pistil created_by: rexnelson creation_date: 2015-10-19T15:44:44Z [Term] id: SOY:0002039 name: Style namespace: soybean_structure is_a: SOY:0002034 ! Pistil created_by: rexnelson creation_date: 2015-10-19T15:45:04Z [Term] id: SOY:0002040 name: Ovary namespace: soybean_structure is_a: SOY:0002034 ! Pistil created_by: rexnelson creation_date: 2015-10-19T15:45:37Z [Term] id: SOY:0002041 name: Ovule namespace: soybean_structure is_a: SOY:0002040 ! Ovary created_by: rexnelson creation_date: 2015-10-19T15:46:20Z [Term] id: SOY:0002042 name: Pollen grain namespace: soybean_structure is_a: SOY:0002037 ! Microsporangium created_by: rexnelson creation_date: 2015-10-19T15:48:22Z [Term] id: SOY:0002043 name: Pollen Developmental Stages def: "The stages of pollen development." [SOY:001] is_a: SOY:0001650 ! Soybean Development Stages created_by: rexnelson creation_date: 2015-10-19T16:03:44Z [Term] id: SOY:0002044 name: Microsporocyte stage def: "The microsporocyte stage of pollen development." [SOY:001] is_a: SOY:0002043 ! Pollen Developmental Stages created_by: rexnelson creation_date: 2015-10-19T16:04:41Z [Term] id: SOY:0002045 name: Tetrad stage def: "The tetrad stage of pollen development." [SOY:001] is_a: SOY:0002043 ! Pollen Developmental Stages created_by: rexnelson creation_date: 2015-10-19T16:05:07Z [Term] id: SOY:0002046 name: Bicellular stage def: "The bicellular stage of pollen development." [SOY:001] is_a: SOY:0002043 ! Pollen Developmental Stages created_by: rexnelson creation_date: 2015-10-19T16:06:31Z [Term] id: SOY:0002047 name: Tricellular stage def: "The tricellular stage of pollen development." [] is_a: SOY:0002043 ! Pollen Developmental Stages created_by: rexnelson creation_date: 2015-10-19T16:06:49Z [Term] id: SOY:0002048 name: Perianth namespace: soybean_structure is_a: SOY:0002030 ! Flower structures created_by: rexnelson creation_date: 2015-10-19T16:17:11Z [Term] id: SOY:0002049 name: Seed oleosin content namespace: soybean_trait def: "The oleosin content of a seed." [] is_a: SOY:0001676 ! Seed protein content created_by: rexnelson creation_date: 2015-10-19T16:58:37Z [Term] id: SOY:0002050 name: Seed storage protein content namespace: soybean_trait def: "The storage protein content of a seed." [SOY:001] xref: GO:0045735 "nutrient reservoir activity" is_a: SOY:0001676 ! Seed protein content created_by: rexnelson creation_date: 2015-10-20T08:48:01Z [Term] id: SOY:0002051 name: Seed glycinin and beta-conglycinin content namespace: soybean_trait def: "The glycinin and beta-conglycinin content of a seed." [SOY:001] is_a: SOY:0002050 ! Seed storage protein content created_by: rexnelson creation_date: 2015-10-20T09:07:03Z [Term] id: SOY:0002052 name: Aluminum and magnesium sensitivity namespace: soybean_trait def: "Reaction of the plant or plant part to aluminum and magnesium ions." [SOY:001] is_a: SOY:0001812 ! Inorganic salt sensitivity created_by: rexnelson creation_date: 2015-10-20T10:16:37Z [Term] id: SOY:0002053 name: Calcium-dependent protein kinase activity namespace: soybean_trait def: "Catalysis of the reaction involving a protein and ATP in the presence of calcium ion." [SOY:001] xref: GO:GO\:0010857 "Catalysis of the reaction: a protein + ATP = a phosphoprotein + ADP. This reaction requires the presence of calcium" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2016-03-29T15:39:08Z [Term] id: SOY:0002054 name: Acyl-[acyl-carrier-protein] desaturase activity namespace: soybean_trait def: "The Acyl-ACP desaturase activity of a plant or plant part." [EC:1.14.19.2, SOY:001] comment: Catalysis of the reaction: stearoyl-[acyl-carrier protein] + reduced acceptor + O2 = oleoyl-[acyl-carrier protein] + acceptor + H2O. The enzyme requires ferredoxin. The enzyme is found in the lumen of plastids, where de novo biosynthesis of fatty acids occurs, and acts on freshly synthesized saturated fatty acids that are still linked to acyl-carrier protein. synonym: "Stearoyl-[acyl-carrier-protein] 9-desaturase" EXACT [EC:1.14.19.2] synonym: "Stearyl acyl carrier protein desaturase" EXACT [EC:1.14.19.2] synonym: "Stearyl-ACP desaturase" EXACT [EC:1.14.19.2] xref: EC:1.14.19.2 "Stearoyl-[acyl-carrier-protein] 9-desaturase" xref: GO:0045300 "Catalysis of the reaction: stearoyl-[acyl-carrier protein] + reduced acceptor + O2 = oleoyl-[acyl-carrier protein] + acceptor + H2O, Requires Ferredoxin." is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2016-03-29T16:05:32Z [Term] id: SOY:0002055 name: Transporter activity namespace: soybean_trait def: "Enables the directed movement of substances into, out of or within a cell, or between cells." [SOY:001] xref: GO:0005215 "Transporter activity" is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rexnelson creation_date: 2016-03-29T16:50:01Z [Term] id: SOY:0002056 name: Water transmembrane transporter activity namespace: soybean_trait def: "Enables the directed movement of water (H2O) from one side of a membrane to the other." [SOY:001] xref: GO:GO\:0005372 "water transmembrane transporter activity" is_a: SOY:0002055 ! Transporter activity created_by: rexnelson creation_date: 2016-03-29T16:50:29Z [Term] id: SOY:0002057 name: Urea transmembrane transporter activity namespace: soybean_trait def: "The process in which urea, the water-soluble compound H2N-CO-NH2, is transported from one side of a membrane to the other by means of some agent such as a transporter or pore." [SOY:001] xref: GO:GO\:0071918 "Urea transmembrane transport" is_a: SOY:0002055 ! Transporter activity created_by: rexnelson creation_date: 2016-03-29T16:54:29Z [Term] id: SOY:0002058 name: Glycerol transmembrane transporter activity namespace: soybean_trait def: "Enables the transfer of glycerol from one side of the membrane to the other." [] xref: GO:GO\:0015168 "Enables the transfer of glycerol from one side of the membrane to the other. Glycerol is 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids." is_a: SOY:0002055 ! Transporter activity created_by: rexnelson creation_date: 2016-03-29T16:57:30Z [Term] id: SOY:0002059 name: Saponin content namespace: soybean_trait def: "The saponin content of a plant or plant part." [SOY:001] is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rexnelson creation_date: 2016-03-29T17:06:31Z [Term] id: SOY:0002060 name: Seed saponin content namespace: soybean_trait def: "The amount of saponins in a seed." [SOY:001] xref: GO:GO\:0016135 "saponin biosynthetic process" is_a: SOY:0002059 ! Saponin content created_by: rexnelson creation_date: 2016-03-29T17:08:26Z [Term] id: SOY:0002061 name: Gibberellin biosynthesis activity namespace: soybean_trait def: "The gibberellin biosynthetic activity of a plant or plant part." [] xref: GO:GO\:0009686 "The chemical reactions and pathways resulting in the formation of gibberellin. Gibberellins are a class of highly modified terpenes that function as plant growth regulators." is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rexnelson creation_date: 2016-03-30T10:15:56Z [Term] id: SOY:0002062 name: gibberellin 20-oxidase activity namespace: soybean_trait def: "Catalysis of the oxidation of C-20 gibberellins to form the corresponding C-19 lactones." [SOY:001] xref: GO:GO\:0045544 "gibberellin 20-oxidase activity" is_a: SOY:0002061 ! Gibberellin biosynthesis activity created_by: rexnelson creation_date: 2016-03-30T10:18:49Z [Term] id: SOY:0002063 name: gibberellin 2-beta-dioxygenase activity namespace: soybean_trait def: "Catalysis of the reaction: a gibberellin + 2-oxoglutarate + O2 = a 2-beta-hydroxygibberellin + succinate + CO2." [SOY:001] xref: EC:1.14.11.13 "Gibberellin 2-beta-dioxygenase" xref: GO:GO\:0045543 "gibberellin 2-beta-dioxygenase activity" is_a: SOY:0002061 ! Gibberellin biosynthesis activity created_by: rexnelson creation_date: 2016-03-30T10:20:24Z [Term] id: SOY:0002064 name: gibberellin 3-beta-dioxygenase activity namespace: soybean_trait def: "Catalysis of the reaction: a gibberellin + 2-oxoglutarate + O2 = a 3-beta-hydroxy-gibberellin + succinate + CO2." [SOY:001] xref: EC:1.14.11.15 "Gibberellin 3-beta-dioxygenase" xref: GO:GO\:0016707 "gibberellin 3-beta-dioxygenase activity" is_a: SOY:0002061 ! Gibberellin biosynthesis activity created_by: rexnelson creation_date: 2016-03-30T10:27:23Z [Term] id: SOY:0002065 name: phosphatidylethanolamine binding namespace: soybean_trait def: "Interacting selectively and non-covalently with phosphatidylethanolamine, any of a class of glycerophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of ethanolamine." [SOY:002] xref: GO:0008429 "phosphatidylethanolamine binding" is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rexnelson creation_date: 2016-04-21T17:37:39Z [Term] id: SOY:0002066 name: Seed dormancy namespace: soybean_trait def: "Seed state in which most physiological activity and growth in a seed and embryo are suspended." [SOY:001] xref: GO:0010162 "seed dormancy process" is_a: SOY:0002190 ! Seed development trait created_by: rexnelson creation_date: 2016-04-26T09:42:45Z [Term] id: SOY:0002067 name: Phytohormone transmembrane transporter activity namespace: soybean_trait def: "Enables the directed movement of phytohormones into, out of or within a cell, or between cells." [SOY:001] xref: GO:0060918 "Auxin transport" is_a: SOY:0002055 ! Transporter activity created_by: rexnelson creation_date: 2016-06-29T10:28:38Z [Term] id: SOY:0002068 name: RNA polymerase II transcription factor activity namespace: soybean_trait def: "Transcription factor that acts at promoters of genes transcribed by RNA polymerase II." [SOY:001] xref: GO:0003700 "transcription factor activity, sequence-specific DNA binding" is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rexnelson creation_date: 2016-07-01T08:13:29Z [Term] id: SOY:0002069 name: Omega-6 fatty acid desaturase activity namespace: soybean_trait def: "The omega-6 fatty acid desaturase activity of a plant or plant part." [SOY:001] comment: Stearic acid is desaturated at the omega-6 position to form oleic acid. synonym: "FAD2" RELATED [DOI:10.2135/cropsci2015.06.0339] xref: EC:1.14.19.22 "Acyl-lipid omega-6 desaturase" xref: GO:GO\:0045485 "Omega-6 fatty acid desaturase activity" is_a: SOY:0002193 ! Fatty acid desaturase activity created_by: rexnelson creation_date: 2016-07-05T15:33:14Z [Term] id: SOY:0002070 name: 2-hydroxyisoflavanone dehydratase activity namespace: soybean_trait def: "The 2-hydroxyisoflavanone dehydratase activity of a plant or plant part." [] comment: Dehydration of 2,7,4'-trihydroxyisoflavanone to daidzein and water. synonym: "Isoflavone synthase" EXACT [] xref: EC:4.2.1.105 "2-hydroxyisoflavanone dehydratase" xref: GO:0033987 "2-hydroxyisoflavanone dehydratase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2016-07-05T16:23:29Z [Term] id: SOY:0002071 name: 2-hydroxyisoflavanone synthase activity namespace: soybean_trait def: "The 2-hydroxyisoflavanone synthase activity of a plant or plant part." [] comment: Catalyzes the conversion of Liquiritigenin + O2 + NADPH <=> 2,7,4'-trihdroxyisoflavanone + h20 + NADP or\n2S-naringenin + O2 + NADPH <=> 2,4',5,7-tetrahydroxyisoflavanone + H2O + NADP is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2016-07-06T15:41:58Z [Term] id: SOY:0002072 name: trans-cinnamate 4-monooxygenase activity namespace: soybean_trait def: "The trans-cinnamate 4-monooxygenase activity of a plant or plant part." [SOY:001] comment: Catalyzes the reduction of trans-cinnamate to 4-hydroxycinnamate. synonym: "Cinnamate 4-hydroxylase" EXACT [] synonym: "Cinnamate 4-monooxygenase" EXACT [] synonym: "Cinnamic acid 4-hydroxylase" EXACT [] xref: EC:1.14.13.11 "Trans-cinnamate 4-monooxygenase" xref: GO:0016710 "trans-cinnamate 4-monooxygenase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2016-07-06T16:25:42Z [Term] id: SOY:0002073 name: isoflavone 4'-O-methyltransferase activity namespace: soybean_trait def: "The isoflavone 4'-O-methyltransferase activity of a plant or plant part." [SOY:001] comment: Catalyzes the methylation of isoflavones genistein and daidzein in soybean. synonym: "IOMT" EXACT [] xref: EC:2.1.1.46 "isoflavone 4'-O-methyltransferase" xref: GO:0030746 "isoflavone 4'-O-methyltransferase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2016-07-06T16:59:11Z [Term] id: SOY:0002074 name: Seed glycinin to beta-conglycinin ratio namespace: soybean_trait def: "The ratio of the glycinin content to the beta-conglycinin content of a seed." [SOY:001] is_a: SOY:0002050 ! Seed storage protein content created_by: rexnelson creation_date: 2016-07-27T13:09:33Z [Term] id: SOY:0002075 name: Ozone sensitivity namespace: soybean_trait def: "The sensitivity of a plant or plant part to exposure to ozone." [SOY:001] is_a: SOY:0001406 ! Abiotic Stress Resistance created_by: rexnelson creation_date: 2016-07-28T12:36:55Z [Term] id: SOY:0002076 name: Ozone sensitivity, leaflet namespace: soybean_trait def: "The sensitivity to ozone damage of leaflets." [SOY:001] xref: GO:0010193 "response to ozone" is_a: SOY:0002075 ! Ozone sensitivity created_by: rexnelson creation_date: 2016-07-28T12:37:33Z [Term] id: SOY:0002077 name: Phytohormone response namespace: soybean_trait def: "The reaction to phytohormones by a plant or plant part." [SOY:001] is_a: SOY:0001408 ! Soybean Growth and Development Traits created_by: rexnelson creation_date: 2016-07-29T15:02:02Z [Term] id: SOY:0002078 name: Response to jasmonic acid namespace: soybean_trait def: "The response of a plant or plant part to jasmonic acid." [SOY:001] xref: GO:GO\:0009753 "Response to jasmonic acid" is_a: SOY:0002077 ! Phytohormone response created_by: rexnelson creation_date: 2016-07-29T15:08:45Z [Term] id: SOY:0002079 name: Response to salicylic acid namespace: soybean_trait def: "The response of a plant or plant part to salicylic acid." [SOY:001] xref: GO:0009751 "Response to salicylic acid" is_a: SOY:0002077 ! Phytohormone response created_by: rexnelson creation_date: 2016-07-29T15:10:43Z [Term] id: SOY:0002080 name: Response to ethylene gas namespace: soybean_trait def: "The reaction of a plant or plant part to ethylene gas." [] is_a: SOY:0002077 ! Phytohormone response created_by: rexnelson creation_date: 2016-07-29T15:12:30Z [Term] id: SOY:0002081 name: Seed cold stress resistance namespace: soybean_trait def: "The resistance of a seed to exposure to low temperatures." [SOY:001] xref: GO:0070417 "cellular response to cold" is_a: SOY:0001883 ! Cold stress resistance created_by: rexnelson creation_date: 2016-08-03T11:18:54Z [Term] id: SOY:0002082 name: Radiation sensitivity namespace: soybean_trait def: "Sensitivity of a plant or plant part to electromagnetic radiation." [SOY:001] xref: GO:0009314 "response to radiation" is_a: SOY:0001406 ! Abiotic Stress Resistance created_by: rexnelson creation_date: 2016-08-03T17:00:06Z [Term] id: SOY:0002083 name: Light sensitivity namespace: soybean_trait def: "Sensitivity of a plant or plant part to electromagnetic radiation of infrared, visible or ultraviolet frequencies." [SOY:001] xref: GO:0009416 "response to light stimulus" is_a: SOY:0002082 ! Radiation sensitivity created_by: rexnelson creation_date: 2016-08-03T17:03:23Z [Term] id: SOY:0002084 name: Response to UV light namespace: soybean_trait def: "Response of a plant or plant part to exposure to UV light." [SOY:001] xref: GO:0009411 "response to UV" is_a: SOY:0002083 ! Light sensitivity created_by: rexnelson creation_date: 2016-08-03T17:06:36Z [Term] id: SOY:0002085 name: UV-B induced leaflet chlorosis namespace: soybean_trait def: "Leaflet chlorosis cased by UV-B exposure." [SOY:001] is_a: SOY:0002084 ! Response to UV light created_by: rexnelson creation_date: 2016-08-03T17:08:58Z [Term] id: SOY:0002086 name: UV-B induced leaflet shape response namespace: soybean_trait def: "Any change in leaflet shape as a result of UV-B exposure." [SOY:001] is_a: SOY:0002084 ! Response to UV light created_by: rexnelson creation_date: 2016-08-03T17:10:40Z [Term] id: SOY:0002087 name: UV-B induced plant damage namespace: soybean_trait def: "Whole plant damage due to UV-B exposure." [SOY:001] is_a: SOY:0002084 ! Response to UV light created_by: rexnelson creation_date: 2016-08-03T17:12:12Z [Term] id: SOY:0002088 name: Lactoylglutathione lyase activity namespace: soybean_trait def: "The lactoylglutahthione lyase activity of a plant or plant part." [SOY:001] comment: Catalyzes the conversion of hemithoacetal (HTA) to S-D-lactyl-glutathione (SLG). Also called glutathione S-transferase 3. synonym: "" RELATED [] synonym: "GLYI" RELATED [] xref: EC:4.4.1.5 "lactoylgutathione lyase" xref: GO:0004462 "lactoylglutathione lyase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2016-08-05T11:28:24Z [Term] id: SOY:0002089 name: Hydroxyacylglutathione hydrolase activity namespace: soybean_trait def: "The hydroxyacylglutathione hydrolase activity of a plant or plant part." [SOY:001] comment: Catalyzes the conversion of S-D-lactyl-glutathione (SLG) to D-lactate + Glutathione. Gene symbol is GlyII. synonym: "GlyII" RELATED [] xref: EC:3.1.2.6 "hydroxyacylglutathione hydrolase" xref: GO:0004416 "hydroxyacylglutathione hydrolase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2016-08-05T11:37:18Z [Term] id: SOY:0002090 name: Maximum quantum yield of PSII primary photochemistry (Fv'/Fm'), Light-adapted namespace: soybean_trait def: "The maximum quantum yield of photosystem II primary photochemistry in the light adapted state. Calculated as Fv'/Fm'. Estimated from Fm - Fo'/Fm where Fo' is the light-adapted fluorescence and Fm is the maximum fluorescence under saturating light or a photosynthesis inhibitor." [DOI:10.1007/s00425-009-1094-0] is_a: SOY:0001875 ! Chlorophyll transient fluorescence created_by: rexnelson creation_date: 2016-08-15T12:03:59Z [Term] id: SOY:0002091 name: Probability an electron reduces an end acceptor at PSI electron acceptor side namespace: soybean_trait def: "The probability that an electron beyond QA- reduces an end acceptor at the PSI electron acceptor side (REo/ETo)." [DOI:10.1007/s00425-009-1094-0] is_a: SOY:0001875 ! Chlorophyll transient fluorescence created_by: rexnelson creation_date: 2016-08-15T13:08:09Z [Term] id: SOY:0002092 name: Flux ratio of trapping per absorption (TRo/ABS) namespace: soybean_trait def: "The flux ratio of electron trapping per light absorption. Expressed as TRo/ABS." [DOI:10.1007/s00425-009-1094-0] is_a: SOY:0001875 ! Chlorophyll transient fluorescence created_by: rexnelson creation_date: 2016-08-15T13:15:07Z [Term] id: SOY:0002093 name: Sulfate transmembrane transporter activity namespace: soybean_trait def: "Enables the transfer of sulfate ions, SO4(2-) across a biological membrane." [GO:0015116] xref: GO:0015116 "sulfate transmembrane transporter activity" is_a: SOY:0002094 ! Ion transmembrane transporter activity created_by: rexnelson creation_date: 2016-08-15T14:17:42Z [Term] id: SOY:0002094 name: Ion transmembrane transporter activity namespace: soybean_trait def: "Enables the transfer of an ion from one side of a membrane to the other." [ISBN:0815340729] xref: GO:0015075 "ion transmembrane transporter activity" is_a: SOY:0002055 ! Transporter activity created_by: rexnelson creation_date: 2016-08-15T14:24:23Z [Term] id: SOY:0002095 name: DNA helicase activity namespace: soybean_trait def: "Catalyzes the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA helix." [GO:0003678] xref: GO:0003678 "DNA helicase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2016-08-16T14:49:39Z [Term] id: SOY:0002096 name: 6'-deoxychalcone synthase activity namespace: soybean_trait def: "The chalcone synthase activity of a plant or plant part." [] comment: Catalyzes the reaction 3-malonyl-CoA + 4-coumaroyl-CoA + NADPH + H+ = 4 CoA + isoliquritigenin + 3 CO2 + NADP+ +H2O synonym: "Chalcone reductase" EXACT [] xref: EC:2.3.1.170 "6'-deoxychalcone synthase" xref: GO:0033808 "6'-deoxychalcone synthase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2016-08-16T15:24:09Z [Term] id: SOY:0002097 name: 2'-hydroxyisoflavone reductase activity namespace: soybean_trait def: "The 2'-hydroxyisoflavone reductase activity of a plant or plant part." [GO:0047526] comment: Catalyzes the reversible reaction: vestitone + NADP+ <=> 2'-hydroxyformononetin + NADPH + H+ synonym: "vestitione:NADP+ oxidoreductase" EXACT [] xref: EC:1.3.1.45 "2'-hydroxyisoflavone reductase" xref: GO:0047526 "2'-hydroxyisoflavone reductase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2016-08-16T16:38:31Z [Term] id: SOY:0002098 name: Phenylalanine ammonia-lyase activity namespace: soybean_trait def: "The phenylalanine ammonia-lyase activity of a plant or plant part." [GO:0045548] comment: Catalyzes the reaction: L-phenylalanine = NH(4)(+) + trans-cinnamate. synonym: "PAL" EXACT [] synonym: "phenylalanine deaminase" EXACT [] xref: EC:4.3.1.24 "phenylalanine ammonia-lyase" xref: GO:0045548 "phenylalanine ammonia-lyase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2016-08-16T16:43:58Z [Term] id: SOY:0002099 name: isoflavone 2'-hydroxylase activity namespace: soybean_trait def: "The isoflavone 2'-hydroxylase activity of a plant or plant part." [] comment: Catalyzes the reversible reaction of an isoflavone + NADPH + O(2) <=> a 2'-hydroxyisoflavone + NADP(+) + H(2)O. synonym: "CYP Ge-3" EXACT [EC:1.14.13.89] synonym: "CYP81E1" EXACT [EC:] synonym: "Isoflavone 2'-monooxygenase" RELATED [EC:1.14.13.89] xref: EC:1.14.13.89 "Isoflavone 2'-hydroxylase" xref: Go:0033773 "isoflavone 2'-hydroxylase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2016-08-16T16:57:09Z [Term] id: SOY:0002100 name: Root volume namespace: soybean_trait def: "The volume of the root system of a plant." [SOY:001] comment: Volume can be measured volumetrically using displacement or by X-Ray CT xref: TO:0000233 "root volume" is_a: SOY:0001732 ! Root Morphology created_by: rexnelson creation_date: 2016-08-22T14:29:03Z [Term] id: SOY:0002101 name: Hypocotyl weight namespace: soybean_trait def: "The weight of the seedling hypocotyl." [SOY:001] is_a: SOY:0001675 ! Hypocotyl Morphology created_by: rexnelson creation_date: 2016-08-22T14:34:08Z [Term] id: SOY:0002102 name: Reaction to Aulacorthum solani namespace: soybean_trait def: "Reaction of the plant or plant part to feeding by Aulacorthum solani." [SOY:001] comment: Aulacorthum solani is also known as the Foxglove aphid. is_a: SOY:0001371 ! Reaction to insect created_by: rexnelson creation_date: 2016-08-23T09:31:43Z [Term] id: SOY:0002103 name: Reaction to Aulacorthum solani, choice namespace: soybean_trait def: "The reaction of the plant or plant part to predation by Aulacorthum solani with a choice of cultivars." [SOY:001] is_a: SOY:0002102 ! Reaction to Aulacorthum solani created_by: rexnelson creation_date: 2016-08-23T09:36:04Z [Term] id: SOY:0002104 name: Reaction to Aulacorthum solani, no choice namespace: soybean_trait def: "The reaction of the plant or plant part to predation by Aulacorthum solani given no choice of cultivars." [SOY:001] is_a: SOY:0002102 ! Reaction to Aulacorthum solani created_by: rexnelson creation_date: 2016-08-23T09:40:13Z [Term] id: SOY:0002105 name: Transcription factor activity namespace: soybean_trait def: "Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription." [GO:0003700] is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rexnelson creation_date: 2016-08-30T13:26:53Z [Term] id: SOY:0002106 name: MYB transcription factor activity namespace: soybean_trait def: "A protein defined by MYB DNA-binding domain at the N-terminus that binds DNA to modify transcription." [DOI:10.1007/s12298-013-0179-1] xref: GO:0000989 "transcription factor activity, transcription factor binding" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-08-30T13:34:04Z [Term] id: SOY:0002107 name: GRAS transcription factor activity namespace: soybean_trait def: "Proteins with a conserved carboxy terminus containing LHRI, VHIID, LHRII, PFYRE, and SAW domains that effect transcription." [BMC:1471-2229/14/373] xref: GO:0000989 "transcription factor activity, transcription factor binding" xref: IPR:IPR005202 xref: PFAM:PF03514 xref: PROSITE:PS50985 is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-09-02T14:25:18Z [Term] id: SOY:0002108 name: Vegetative period namespace: soybean_trait def: "The duration from emergence to R1." [DOI:10.1007/s10681-014-1209-y] is_a: SOY:0001408 ! Soybean Growth and Development Traits created_by: rexnelson creation_date: 2016-09-06T11:47:27Z [Term] id: SOY:0002109 name: Reproductive period namespace: soybean_trait def: "The duration from beginning of flowering (R1) to physiological maturity (R8)." [DOI:10.1007/s10681-014-1209-y] is_a: SOY:0001408 ! Soybean Growth and Development Traits created_by: rexnelson creation_date: 2016-09-06T11:52:22Z [Term] id: SOY:0002110 name: Total growth duration namespace: soybean_trait def: "The number of days from emergence to physiological maturity (R8)." [DOI:10.1007/s10681-014-1209-y] is_a: SOY:0001408 ! Soybean Growth and Development Traits created_by: rexnelson creation_date: 2016-09-06T11:55:55Z [Term] id: SOY:0002111 name: Reproductive to vegetative period ratio namespace: soybean_trait def: "The ratio of the reproductive (R) to the vegetative (V) period (R/V)." [DOI:10.1007/s10681-014-1209-y] is_a: SOY:0001408 ! Soybean Growth and Development Traits created_by: rexnelson creation_date: 2016-09-06T11:58:41Z [Term] id: SOY:0002112 name: R/V photothermal sensitivity namespace: soybean_trait def: "The effect on the reproductive (R) to vegetative (V) period ratio (R/V) by temperature and day length." [DOI:10.1007/s10681-014-1209-y] is_a: SOY:0002111 ! Reproductive to vegetative period ratio created_by: rexnelson creation_date: 2016-09-06T12:02:06Z [Term] id: SOY:0002113 name: Reproductive period photothermal sensitivity namespace: soybean_trait def: "The effect of day length and temperature on the reproductive period (R) duration." [DOI:10.1007/s10681-014-1209-y] is_a: SOY:0002109 ! Reproductive period created_by: rexnelson creation_date: 2016-09-06T12:06:05Z [Term] id: SOY:0002114 name: Seed weight per plant namespace: soybean_trait def: "The weight of seeds harvested from a plant." [SOY:001] is_a: SOY:0001629 ! Seed weight created_by: rexnelson creation_date: 2016-09-08T12:03:37Z [Term] id: SOY:0002115 name: Cyclophilin activity namespace: soybean_trait def: "The cyclophylin activity of a protein." [DOI:10.1104/pp.103.022160] comment: Cyclophilins catalyze peptidyl-prolyl cis-trans isomerization of proline residues. They may be involved in protein-protein interactions, protein folding and protein transport. synonym: "cyclophilin" EXACT [] xref: EC:5.2.1.8 "Peptidylprolyl isomerase" xref: GO:0003755 "peptidyl-prolyl cis-trans isomerase activity" is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rexnelson creation_date: 2016-10-12T10:02:07Z [Term] id: SOY:0002116 name: Basic leucine zipper transcription factor activity namespace: soybean_trait def: "A protein with a basic DNA binding domain and a basic leucine zipper dimerization domain that affects transcription." [IPR:004827] comment: The basic region of the basic-leucine zipper domain (bZIP) determines DNA binding specificity and the leucine zipper region is responsible for dimerization. The bZIP domains can be subdivided into three classes (bZIP_1, bZIP_Maf and bZIP_2). synonym: "bZIP" EXACT [] xref: GO:0003700 "transcription factor activity, sequence-specific DNA binding" xref: GO:0006355 "regulation of transcription, DNA-templated" xref: IPR:004827 "Basic-leucine zipper domain" xref: PFAM:PF00170 "bZIP transcription factor" xref: PFAM:PF03131 "bZIP Maf transcription factor" xref: PFAM:PF07716 "basic region leucine zipper" xref: PS:50217 "BZIP" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-10-12T15:36:51Z [Term] id: SOY:0002117 name: CCAAT-box binding transcription factor activity namespace: soybean_trait def: "A heteromeric transcription factor complex with CCAAT-box binding activity." [DOI:10.1016/j.tplants.2012.07.004] comment: This class of proteins are also know as Nuclear Factor Y (NF-Y) or Heme Activated Protein (HAP) transcription factors. synonym: "HAP" EXACT [] synonym: "NF-Y" EXACT [] xref: GO:0016602 "CCAAT-binding factor complex" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-10-12T16:00:55Z [Term] id: SOY:0002118 name: WRKY transcription factor activity namespace: soybean_trait def: "A protein with a WRKY DNA binding domain that effects transcription." [DOI:10.1016/j.tplants.2010.02.006] comment: WRKY proteins bind to W-box domains in the DNA sequence (TTGACC/T). xref: GO:0003700 "transcription factor activity, sequence-specific DNA binding" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-10-12T16:24:27Z [Term] id: SOY:0002119 name: TFIIIA type zinc finger transcription factor activity namespace: soybean_trait def: "A protein with a TFIIIA-type zinc finger motif that effects transcription." [DOI:10.1007/s000180050186] comment: TFIIIA-type transcription factors have a (CX(2-4)FX(5)LX()2HX(3-5)H) zinc finger motif. xref: GO:0003700 "transcription factor activity, sequence-specific DNA binding" xref: GO:0006355 "regulation of transcription, DNA-templated" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-10-13T15:04:24Z [Term] id: SOY:0002120 name: GATA1 like zinc finger transcription factor activity namespace: soybean_trait def: "A protein containing a CX(2)CX(17)CX(2)C DNA binding domain and effects transcription." [DOI:10.1007/s000180050186] comment: GATA1-like proteins are a member of the Cys(2)/Cys(2) transcription factor class. xref: GO:0003700 "transcription factor activity, sequence-specific DNA binding" xref: GO:0006355 "regulation of transcription, DNA-templated" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-10-13T15:39:10Z [Term] id: SOY:0002121 name: Dof zinc finger transcription factor activity namespace: soybean_trait def: "A protein containing a CX(2)CX(21)CX(2)C zinc finger DNA binding domain that effects transcription." [DOI:10.1007/s000180050186] comment: Dof transcription factors are considered distinct because of the long space between the second and third cystine residues. Dof family TF's can bind DNA with one finger thus the name DNA binding with one finger (DOF). xref: GO:0003700 "transcription factor activity, sequence-specific DNA binding" xref: GO:0006355 "regulation of transcription, DNA-templated" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-10-13T16:10:14Z [Term] id: SOY:0002122 name: MADS-box transcription factor activity namespace: soybean_trait def: "A protein that binds CArG DNA motifs and effect transcription." [DOI:10.1007/s11033-012-2438-6] comment: CArG boxes have the (CC[A/T]6GG) sequence. Maybe sub-classified as Type I with SRF-like protein domains and Type II with MEF2-like and MIKC-type protein domains. May participate in floral organ identity. xref: GO:0003700 "transcription factor activity, sequence-specific DNA binding" xref: GO:0006355 "regulation of transcription, DNA-templated" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-10-18T11:30:35Z [Term] id: SOY:0002123 name: ARID type transcription factor activity namespace: soybean_trait def: "A protein containing an ARID DNA binding domain that affects transcription." [DOI:10.1093/nar/gki145] xref: GO:0003700 "transcription factor activity, sequence-specific DNA binding" xref: GO:0006355 "regulation of transcription, DNA templated" xref: IPR:IPR001606 "ARID DNA-binding domain" xref: PFAM:PF01388 "ARID/Bright DNA binding domain" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-11-09T11:36:03Z [Term] id: SOY:0002124 name: transcription regulatory activity namespace: soybean_trait def: "Proteins that interact with other transcriptional proteins to affect transcription." [SOY:001] is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rexnelson creation_date: 2016-11-09T13:13:15Z [Term] id: SOY:0002125 name: AUX/IAA type transcription factor activity namespace: soybean_trait def: "A nuclear protein containing a beta-alpha-alpha DNA binding domain that effects transcription." [DOI:10.1105/tpc.010289] xref: GO:0003700 "transcription factor activity, sequence-specific DNA binding" xref: GO:0006355 "regulation of transcription, DNA-templated" xref: IPR:IPR033389 "AUX/IAA domain" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-11-09T13:38:27Z [Term] id: SOY:0002126 name: Transcriptional activator activity namespace: soybean_trait def: "A protein interacting with RNA polymerase II transcription factor non-covalently to enhance transcription." [GO:0001190] comment: This protein may be a single protein or protein complex that increases the rate of transcription. xref: GO:0001190 "transcriptional activator activity, RNA polymerase II transcription factor binding" xref: GO:0006355 "regulation of transcription, DNA-templated" is_a: SOY:0002124 ! transcription regulatory activity created_by: rexnelson creation_date: 2016-11-09T15:14:45Z [Term] id: SOY:0002127 name: NFX1 like transcription factor activity namespace: soybean_trait def: "A protein containing NFX1-like zinc finger domain and interacts with X-box domain in a promoter to effect transcription." [DOI:10.1111/j.1438-8677.2009.00303.x] comment: NFX1-like proteins bind DNA in X-box domains. synonym: "NF-X1" EXACT [] xref: GO:0001078 "transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding" xref: GO:0003700 "transcription factor activity, sequence-specific DNA binding" xref: GO:0006355 "regulation of transcription, DNA-templated" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-11-18T09:27:48Z [Term] id: SOY:0002128 name: AP2 like transcription factor activity namespace: soybean_trait def: "A protein containing one or more AP2 domains that effect transcription." [DOI:10.1093/nar/gkt1016] comment: This family of transcription factors are unified by the presence of the AP2 domain (AP2/ERF-AP2, AP2/ERF-ERF) can contain a B3 domain (AP2/ERF-RAV). synonym: "Apetala2" RELATED [] xref: GO:0003700 xref: GO:0006355 xref: IPR:IPR001471 "AP2/ERF" xref: PFAM:PF00847 "AP2 domain" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-11-21T09:56:13Z [Term] id: SOY:0002129 name: NF-YA like transcription factor monomer activity namespace: soybean_trait def: "A protein that binds to NF-YB and NF-YC monomers. The resulting trimer binds to CCAAT-box motifs effecting transcription." [DOI:10.1371/journal.pgen.1006333] comment: NF-YA, NF-YB and NF-YC monomers make up the mature NF-Y trascription factor. synonym: "CCAAT-box binding protein" RELATED [] synonym: "CPB" RELATED [] xref: GO:0003700 xref: GO:0006355 xref: GO:0016602 "CCAAT-box binding factor complex" is_a: SOY:0002117 ! CCAAT-box binding transcription factor activity created_by: rexnelson creation_date: 2016-11-18T09:57:46Z [Term] id: SOY:0002130 name: NF-YB like transcription factor monomer activity namespace: soybean_trait def: "A protein that binds to NF-YA and NF-YC monomers. The resulting trimer binds to CCAAT-box motifs effecting transcription." [DOI:10.1371/journal.pgen.1006333] comment: NF-YA, NF-YB and NF-YC monomers make up the mature NF-Y trascription factor. xref: GO:0003700 xref: GO:0006355 xref: GO:0016602 is_a: SOY:0002117 ! CCAAT-box binding transcription factor activity created_by: rexnelson creation_date: 2016-11-18T10:09:07Z [Term] id: SOY:0002131 name: NF-YC like transcription factor monomer activity namespace: soybean_trait def: "A protein that binds to NF-YA and NF-YB monomers. The resulting trimer binds to CCAAT-box motifs effecting transcription." [DOI:10.1371/journal.pgen.1006333] comment: NF-YA, NF-YB and NF-YC monomers make up the mature NF-Y trascription factor. synonym: "CBP" RELATED [] synonym: "CCAAT-box binding protein" RELATED [] xref: GO:0003700 xref: GO:0006355 xref: GO:0016602 is_a: SOY:0002117 ! CCAAT-box binding transcription factor activity created_by: rexnelson creation_date: 2016-11-18T10:12:53Z [Term] id: SOY:0002132 name: NAC like transcription factor activity namespace: soybean_trait def: "A protein containing a NAC domain that binds DNA to effect transcription." [DOI:10.3389/fpls.2015.00902] xref: GO:0003700 xref: GO:0006355 xref: IPR:IPR003441 "NAC domain" xref: PFAM:PF01849 "NAC domain" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-11-18T10:26:12Z [Term] id: SOY:0002133 name: ALFIN like transcription factor activity namespace: soybean_trait def: "A protein that contains a ALFIN domain that binds H3 tails trimethylated on Lys-4 of histones and effects transcription." [DOI:10.1104/pp.120.2.473] comment: ALFIN domain binds to H3 tails trimethylated on Lys-4 of Histones that mark the transcription start sites of many active genes. xref: GO:0006355 xref: GO:0042393 "histone binding" xref: IPR:IPR021998 "Alfin family domain" xref: PFAM:PF12165 "Alfin" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-11-18T11:25:34Z [Term] id: SOY:0002134 name: B3 like transcription factor activity namespace: soybean_trait def: "A protein containing a B3 domain and effecting transcription." [DOI:10.1093/nar/gkt1016] comment: This family of transcription factors are unified by the presence of a B3 domain. Members can also contain an auxin response factor (ARF) domain (B3-ARF). xref: GO:0003700 xref: GO:0006355 xref: IPR:IPR003340 "B3 binding domain" xref: PFAM:PF02362 "B3 DNA binding domain" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-11-21T10:21:47Z [Term] id: SOY:0002135 name: BBR-BPC like transcription factor activity namespace: soybean_trait def: "A protein containing a BBR-BPC domain that effects transcription." [DOI:0.1093/nar/gkt1016] comment: The BPC domain binds to GA dinucleotide repeats so is also referred to as GAGA-binding domain. synonym: "basic pentacysteine protein" EXACT [] xref: GO:0003700 xref: GO:0006355 xref: PFAM:PF06217 "GAGA-binding domain" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-11-21T10:39:37Z [Term] id: SOY:0002136 name: BES1 like transcription factor activity namespace: soybean_trait def: "A protein that contains a BES1 domain that effects transcription." [DOI:0.1093/nar/gkt1016] comment: May interact with BIM1 to bind E-box sequences in Brassinosteroid induced promoters. xref: GO:0003700 xref: GO:0006355 xref: PFAM:PF05687 "BES1/BZR1 plant transcription factor" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-11-21T10:54:42Z [Term] id: SOY:0002137 name: Basic helix-loop-helix like transcription factor activity namespace: soybean_trait def: "A protein containing one or more basic helix-loop-helix domains that effects transcription." [DOI:0.1093/nar/gkt1016] comment: Basic helix-loop-helix (bHLH) proteins usually form dimers that bind to DNA. It is a large family and the various paralogs can combine to bind specifically to many gene promoters. Members of this family usually bind E-box sequences. synonym: "bHLH" EXACT [] xref: GO:0003700 xref: GO:0006355 xref: PFAM:PF00010 is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-11-21T11:03:36Z [Term] id: SOY:0002138 name: C2C2 zinc finger like transcription factor activity namespace: soybean_trait def: "A protein containing a number of C2 zinc finger domains that effect transcription." [DOI:0.1093/nar/gkt1016] comment: The C2C2 family of transcription factors include CO-like (C2C2-CO), Dof-like (C2C2-Dof), GATA-like (C2C2-GATA), LSD-like (C2C2-LSD) and YABBY-like (C2C2-YABBY). Each defined by unique designs. CO-like (B-box ZF), DOF-like (ZF-Dof), GATA-like (GATA ZF), LSD-like (ZF LSD1) and YABBY-like (YABBY). xref: GO:0003700 xref: GO:0006355 xref: IPR:IPR000315 xref: IPR:IPR000679 xref: IPR:IPR003851 xref: IPR:IPR005735 xref: IPR:IPR006780 xref: PFAM:PF00320 "GATA zinc finger" xref: PFAM:PF00643 "B-box zinc finger" xref: PFAM:PF02701 "Dof domain zinc finger" xref: PFAM:PF04690 "Yabby protein" xref: PFAM:PF06943 "LSD1 zinc finger" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-11-21T13:47:30Z [Term] id: SOY:0002139 name: C2H2 like transcription factor activity namespace: soybean_trait def: "A protein containing a C2H2 zinc finger domain that effects transcription." [DOI:0.1093/nar/gkt1016] comment: The C2H2 (Cys2His2) type zinc finger protein transcription factors are wide spread. There may have additional domains (KRAB, SCAN, BTB/POZ). xref: GO:0003700 xref: GO:0005634 xref: GO:0006351 xref: IPR:IPR015880 "zinc finger, C2H2-like" xref: IPR:IPR027775 "C2H2 zinc finger protein family" xref: PFAM:PF00096 "Zinc finger, C2H2 type" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-11-21T14:53:06Z [Term] id: SOY:0002140 name: C3H like transcription factor activity namespace: soybean_trait def: "A protein containing a C-x8-C-x5-C-x3-H (C3H) zinc finger domain that effects transcription." [DOI:0.1093/nar/gkt1016] synonym: "CCCH Znf" EXACT [] xref: GO:0003700 xref: GO:0006355 xref: IPR:IPR000571 "Zinc finger, CCCH-type" xref: PFAM:PF00642 "Zinc finger C-x8-C-x5-C-x3-H type" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-11-21T15:18:27Z [Term] id: SOY:0002141 name: CAMTA like transcription factor activity namespace: soybean_trait def: "A protein containing a CG-1 and IQ calmodulin-binding domain that effects transcription." [DOI:0.1093/nar/gkt1016] xref: IPR:IPR000048 "IQ motif, EF-hand binding site" xref: IPR:IPR005559 "CG-1 DNA binding domain" xref: PFAM:PF00612 "IQ calmodulin-binding motif" xref: PFAM:PF03859 "CG-1 domain" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-11-21T15:48:18Z [Term] id: SOY:0002142 name: CPP like transcription factor activity namespace: soybean_trait def: "A protein containing one or more CXC DNA binding domains and effects transcription." [DOI:10.4238/2015.February.13.4] comment: The Cysteine-rich polycomb-like protein family (CPP) have a highly conserved CXC DNA binding domain. The Cys-rich CXC domain contains three repeats of the C-X(6)-C-X(3)-C-X-C motif. These proteins may have a SET domain. synonym: "Tesmin" BROAD [PFAM:PF03638] synonym: "TSO1-like" BROAD [PFAM:PF03638] xref: GO:0003700 xref: GO:0005515 "protein binding" xref: GO:0006355 xref: IPR:IPR001214 "SET domain" xref: IPR:IPR026489 "CXC domain" xref: PFAM:PF00856 xref: PFAM:PF03638 "Tesmin/TSO1-like CXC domain, cysteine-rich domain" xref: PROSITE:PS51633 "CXC" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-11-23T11:14:22Z [Term] id: SOY:0002143 name: DBB like transcription factor activity namespace: soybean_trait def: "A protein containing 2 or more double B-box zinc finger domains (DBB, Double B-BOX) that effects transcription." [DOI:10.1271/bbb.80041] comment: These proteins are involved in circadian regulation in A. thaliana. synonym: "BANK" BROAD [IPR:IPR017893] synonym: "BCAP" BROAD [IPR:IPR017893] synonym: "DOF" BROAD [IPR:IPR017893] xref: GO:0003700 xref: GO:0006355 xref: IPR:IPR017893 "DBB domain" xref: PFAM:PF14545 is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-11-23T11:48:04Z [Term] id: SOY:0002144 name: E2F-DP like transcription factor activity namespace: soybean_trait def: "A protein that contains as E2F_TDP domain and binds DNA effecting transcription." [PMC:PMC230484] comment: The E2F/DP family recognize the c/gGCGCg/c consensus sequence. These proteins form homo- and hetero-dimers with themselves or with TDP1 or TDP2. xref: GO:0003700 xref: GO:0005667 xref: GO:0006355 xref: IPR:IPR011991 "E2F/DP family, winged-helix DNA-binding domain" xref: PFAM:PF02319 "E2F/DP family winged-helix DNA-binding domain" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-11-23T12:04:49Z [Term] id: SOY:0002145 name: EIL like transcription factor activity namespace: soybean_trait def: "A protein with a EIL/EIN3 domain that effects transcription." [DOI:http\:///10.1016/j.jmb.2005.02.065] comment: The DNA binding site consensus sequence is AYGWAYCT. synonym: "EIN3-like" EXACT [] synonym: "Ethylene-insensitive3 like" RELATED [] xref: GO:0003700 xref: GO:0005634 xref: IPR:IPR023278 "Ethylene insensitive 3-like protein, DNA-binding domain" xref: PFAM:PF04873 "Ethylene insensitive 3" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-12-02T15:55:17Z [Term] id: SOY:0002146 name: FAR1 like transcription factor activity namespace: soybean_trait def: "A protein with a FAR1 domain that effects transcription." [DOI:/10.1104/pp.108.120436] comment: The consensus binding site is CACGCGC. The FAR1 domain is a C2H2-type zinc finger domain. synonym: "Far-Red-Impaired Response 1 like" EXACT [] synonym: "FAR1" EXACT [] xref: GO:0003700 xref: GO:0005634 xref: IPR:IPR004330 "FAR1 DNA binding domian" xref: PFAM:PF03101 "FAR1 DNA-binding domian" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-12-02T16:14:47Z [Term] id: SOY:0002147 name: GARP-ARR-B like transcription factor activity namespace: soybean_trait def: "A protein with one or more type-B or GARP motifs that bind to DNA and effects transcription." [DOI:/10.1105/tpc.002733] comment: The GARP domain is represented by the B-motif of the Arabidopsis Response Regulator (ARR) 10 protein. GARP-ARR proteins bind to a core DNA sequence AGATT. synonym: "Arabidopsis Response Regulator" RELATED [] synonym: "ARR" RELATED [] xref: GO:0003700 xref: GO:0006355 is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-12-05T11:01:24Z [Term] id: SOY:0002148 name: GARP-G2-like transcription factor activity namespace: soybean_trait def: "A protein with TEA and B motif that effects transcription." [PMC:135554] comment: The G2 protein is associated with chloroplast development. synonym: "G2 like kinases" RELATED [] synonym: "GLK" RELATED [] xref: GO:0003700 xref: GO:0006355 is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-12-05T11:52:44Z [Term] id: SOY:0002149 name: GeBP like transcription factor activity namespace: soybean_trait def: "A protein with a DUF573 domain that effects transcription." [DOI:10.1104/pp.107.110270] comment: GeBP proteins are a leucine-zipper like transcription factor with a conserved C-terminal domain, DUF573. These proteins are involved in the cyctokinin homostasis. synonym: "GeBP" EXACT [] synonym: "Glaborous1 enhancer-binding protein" NARROW [] xref: GO:0003700 xref: GO:0006355 xref: IPR:IPR007592 "GLABROUS1 enhancer-binding protein family" xref: PFAM:PF04504 is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-12-05T13:10:23Z [Term] id: SOY:0002150 name: GRF like transcription factor activity namespace: soybean_trait def: "A protein with a QLQ (PF08880) and a WRC (PF08879) that effects transcription." [DOI:/10.1016/j.molp.2015.01.013] comment: Growth regulation factors (GRF) are involved in plant, flowering, seed and root development. The QLQ domain is a three amino acid domain of glutamine, leucine and glutamine. Where the WRC domain is also a three amino acid domain of tryptophan, arginine, and cystein. The expression of some GRF's are affected by miRNA396. synonym: "Growth regulating factors" BROAD [] xref: GO:0003700 xref: GO:0006355 xref: GO:0008270 "Zinc ion binding" xref: IPR:IPR010666 "Zinc finger, GRF-type" xref: PFAM:PF06839 "GRF zinc finger" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-12-05T14:18:00Z [Term] id: SOY:0002151 name: HB like transcription factor activity namespace: soybean_trait def: "A protein containing a HB domain and effecting transcription." [SOY:001] is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-12-05T14:48:20Z [Term] id: SOY:0002152 name: HB-HD-ZIP like transcription factor activity namespace: soybean_trait def: "A homeobox protein with a HD-ZIP domain that effects transcription." [DOI:/10.1016/j.tplants.2007.08.003] comment: This class of plant homeotic genes contains a homeodomain associated with a leucine zipper. xref: GO:0003700 xref: GO:0006355 xref: IPR:IPR006712 "HD-ZIP protein, N-terminal" xref: PFAM:PF00046 "HB" xref: PFAM:PF04618 "HD-ZIP_N" is_a: SOY:0002151 ! HB like transcription factor activity created_by: rexnelson creation_date: 2016-12-05T15:03:27Z [Term] id: SOY:0002153 name: HB-Knox like transcription factor activity namespace: soybean_trait def: "A protein containing a homeobox, KNOX1 and KNOX2 domain that effects transcription." [DOI:10.1105/TPC.010113] comment: The KNOX1 domain effects the KNOX phenotype severity. The KNOX2 and homeobox domins are necessary for presentation of the mutant phenotype. synonym: "KNOX1" BROAD [] synonym: "KNOX2" BROAD [] xref: GO:0003677 "DNA binding" xref: GO:0005634 "nucleus" xref: IPR:IPR005540 "KNOX1 domain" xref: IPR:IPR005541 "KNOX2 domain" xref: PFAM:PF00046 xref: PFAM:PF03790 "KNOX1 domain" xref: PFAM:PF03791 "KNOX2 domain" is_a: SOY:0002151 ! HB like transcription factor activity created_by: rexnelson creation_date: 2016-12-12T13:56:43Z [Term] id: SOY:0002154 name: HB-BEL like transcription factor activity namespace: soybean_trait def: "A protein with a homeobox, POX/BEL, and KNOX domains that effects transcription." [DOI:/10.1093/molbev/msp201] xref: GO:0003677 "DNA binding" xref: IPR:IPR001356 "homeobox domain" xref: IPR:IPR006563 "associated with HOX" xref: PFAM:PF00046 "HB" xref: PFAM:PF00046 "homeobox domain" xref: PFAM:PF05920 "Homeobox_KN" xref: PFAM:PF07526 "POX domain" is_a: SOY:0002151 ! HB like transcription factor activity created_by: rexnelson creation_date: 2016-12-12T15:33:57Z [Term] id: SOY:0002155 name: HB-WOX like transcription factor activity namespace: soybean_trait def: "A protein with a homeobox and WUS domain that affects transcription." [DOI:10.1186/gb-2009-10-12-248] synonym: "WUS" EXACT [] xref: GO:0003700 xref: GO:0006355 xref: PFAM:PF00046 is_a: SOY:0002151 ! HB like transcription factor activity created_by: rexnelson creation_date: 2016-12-13T13:56:13Z [Term] id: SOY:0002156 name: HB-PHD like transcription factor activity namespace: soybean_trait def: "A protein with a homeobox and PHD domain that effects transcription." [] xref: GO:0003700 xref: GO:0006355 xref: IPR:IPR019787 "Zinc finger, PHD-finger" xref: PFAM:PF00046 "HB" xref: PFAM:PF00628 "PHD finger" is_a: SOY:0002151 ! HB like transcription factor activity created_by: rexnelson creation_date: 2016-12-13T14:22:18Z [Term] id: SOY:0002157 name: HRT like transcription factor activity namespace: soybean_trait def: "A protein with HRT domains that effect transcription." [DOI:10.1074/jbc.273.36.23313] comment: The HRT domain contains 3 (CX8-9)(CX10)(CX2H) zinc fingers. HRT proteins repress transcription. synonym: "Hordeum Repressor of Transcription" RELATED [] xref: GO:0003700 xref: GO:0005634 xref: GO:0006355 is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-12-13T15:08:07Z [Term] id: SOY:0002158 name: HSF like transcription factor activity namespace: soybean_trait def: "A protein with a HSF binding domain that effects transcription." [DOI:10.3389/fpls.2016.00114] comment: Binds heat shock promoter elements. DNA binding domain is in the N-terminus of the first NLS region. synonym: "Heat Stress Transcription Factor" RELATED [] xref: GO:0003700 xref: GO:0005515 xref: GO:0006355 xref: IPR:IPR000232 "Heat shock factor (HSF)-type, DNA-binding" xref: PFAM:PF00447 "HSF_DNA-bind" xref: PROSITE:PS00434 "HSF domain" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-12-13T15:55:16Z [Term] id: SOY:0002159 name: LBD like transcription factor activity namespace: soybean_trait def: "A protein with a LOB domain that effects transcription." [DOI:10.1093/nar/gkm775] comment: This class of transcription factor activity may influence Lateral Organ Boundaries (LOB). The LOB domain contains a Cys 2/ Cys2 zinc finger. The DNA recognition sequence is 6bp long ((G)CGGC(G)). The core CGGC is conserved where the flanking G's are the most common base. synonym: "Lateral Organ Boundaries" RELATED [] synonym: "Lateral Organ Boundaries Domain" RELATED [] synonym: "LBD" BROAD [] synonym: "LOB" NARROW [] xref: GO:0003700 xref: GO:0005634 "Nucleus" xref: GO:0006355 xref: IPR:IPR004883 "Lateral organ boundaries, LOB" xref: PFAM:PF03195 "DUF260" xref: PROSITE:PS50891 "LOB" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-12-14T10:43:43Z [Term] id: SOY:0002160 name: LFY like transcription factor activity namespace: soybean_trait def: "A protein with a LFY domain that effects transcription." [DOI:10.1105/tpc.111.083329] comment: The LFY domain binds a 19 bp consensus of TATTACCCANTCGGGTAATA. synonym: "FLO" BROAD [] synonym: "Floricaula" BROAD [] synonym: "Leafy" BROAD [] synonym: "LFY" BROAD [] xref: GO:0003700 xref: GO:0005634 xref: GO:0006355 xref: IPR:IPR002910 "Floricaula/Leafy protein" xref: PFAM:PF01698 "FLO_LFY" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-12-14T11:19:34Z [Term] id: SOY:0002161 name: LIM like transcription activation activity namespace: soybean_trait def: "LIM like proteins contain one or more LIM domains composed of dual zinc finger regions that promote protein-protein interactions leading to transcriptional activation." [DOI:10.1038/nrm1499] comment: Currently no evidence that the LIM domain complexes with DNA. It is believed to only effect protein-protein interactions. synonym: "CRP" NARROW [] synonym: "cytosine rich protein" NARROW [] xref: GO:0005515 "protein binding" xref: GO:0010468 "Regulation of transcription" xref: IPR:IPR001781 "Zinc finger, LIM-type" xref: PFAM:PF00412 "LIM domain" xref: PROSITE:PS00478 "LIM_DOMAIN_1" xref: PROSITE:PS50023 "LIM_DOMAIN_2" is_a: SOY:0002126 ! Transcriptional activator activity created_by: rexnelson creation_date: 2016-12-14T13:52:31Z [Term] id: SOY:0002162 name: Transcriptional repressor activity namespace: soybean_trait is_a: SOY:0002124 ! transcription regulatory activity created_by: rexnelson creation_date: 2016-12-14T14:31:55Z [Term] id: SOY:0002163 name: LUG like transcriptional repressor activity namespace: soybean_trait def: "A protein with a LUFS domain that leads to repression transcription." [DOI:10.1073/pnas.0403055101] comment: Transcriptional repression of AGAMOUS in Arabidopsis occurs via the LEUNIG/SEUSS proteins. The LUFS domain of LEUNIG (LUG) interacts with the SEUSS (SEU) protein leading to repression of AGAMOUS (AG). The exact mechanism is unknown. xref: GO:0005515 "Protein binding" xref: GO:0005634 xref: GO:0010468 is_a: SOY:0002162 ! Transcriptional repressor activity created_by: rexnelson creation_date: 2016-12-14T14:32:27Z [Term] id: SOY:0002164 name: NOZZLE like transcription factor activity namespace: soybean_trait def: "A protein with a NOZZLE domain that effects transcription." [PMID:12183381] xref: GO:0003700 xref: GO:0005634 xref: GO:0006355 xref: IPR:IPR014855 "Plant transcription factor NOZZLE" xref: PFAM:PF08744 "NOZZLE" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-12-14T15:18:04Z [Term] id: SOY:0002165 name: OFP like transcription factor activity namespace: soybean_trait def: "A protein that contains an OVATE domain and effects transcription." [DOI:10.1111/j.1365-313X.2007.03096.x] comment: OFP is a negative regulator of transcription. xref: GO:0003677 "DNA binding" xref: GO:0003700 "DNA binding" xref: IPR:IPR025830 "DNA-binding domain, ovate family-like" xref: PFAM:PF04844 "Transcriptional repressor, ovate" xref: PFAM:PF13724 "DNA binding domain" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-12-14T16:02:37Z [Term] id: SOY:0002166 name: PLATZ like transcription factor activity namespace: soybean_trait def: "A protein containing a PLATZ domain that effects transcription." [PMCID:PMC60209] comment: PLATZ domain consensus is C-X2-H-X11-C-X2-C-X(4-5)-C-X2-C-X(3-7)-H-X2-H. It recognizes AT rich sequences. The PLATZ domain is a zinc finger and PLATZ proteins are known to repress transcription. synonym: "Plant AT-rich sequence and zinc binding protein" BROAD [] xref: GO:0003700 xref: GO:0006355 xref: GO:0010468 xref: IPR:IPR006734 "DUF597" xref: PFAM:PF04640 "PLATZ transcription factor" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-12-15T10:47:39Z [Term] id: SOY:0002167 name: RWP-RK like transcription factor activity namespace: soybean_trait def: "A protein that contains a RWP-RK domain and effects transcription." [DOI:10.1093/jxb/eru261] comment: The RWP-RK domain contains a RWPxRK motif that is involved in DNA binding. RWP-RK transcription factors may be involved in responding to Nitrogen status. xref: GO:0003700 xref: GO:0006355 xref: GO:0010468 xref: IPR:IPR003035 "RWP-RK domain" xref: PFAM:PF02042 "RWP-RK domain" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-12-15T11:10:13Z [Term] id: SOY:0002168 name: S1FA like transcription factor activity namespace: soybean_trait def: "A protein with a S1FA domain that effects transcription." [] comment: The S1FA domain may bind the repressor element S1F in gene promoters. S1FA is a small 70 AA protein that contains a NLS and a putative DNA binding domain. xref: GO:0003677 xref: GO:0005634 xref: GO:0006355 xref: IPR:06779 "DNA binding protein S1FA" xref: PFAM:PF04689 "DNA binding protein S1FA" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-12-15T11:35:43Z [Term] id: SOY:0002169 name: SBP like transcription factor activity namespace: soybean_trait def: "A protein with a SBP box domain that effects transcription." [DOI:10.1111/j.1744-7909.2010.00987.x] comment: The SPB box recognizes the sequence TNCGTACAA. synonym: "SPL" EXACT [] xref: GO:0003677 "DNA binding" xref: GO:0005634 "nucleus" xref: IPR:IPR004333 "Transcription factor, SBP-box" xref: PFAM:PF03110 "SBP" xref: PROSITE:PS51141 "ZF_SBP" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-12-15T14:50:41Z [Term] id: SOY:0002170 name: SRS like transcription factor activity namespace: soybean_trait def: "A protein with a SRS domain that effects transcription." [DOI:10.1111/j.1365-313X.2006.02774.x] synonym: "SHI related sequence" EXACT [] xref: IPR:IPR007818 xref: PFAM:PF05142 "DUF702" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-12-15T15:25:11Z [Term] id: SOY:0002171 name: STAT like transcription factor activity namespace: soybean_trait def: "A protein with STAT DNA binding and SH2 domains that effects transcription." [DOI:10.1242/dev.026377] xref: GO:0003700 xref: GO:0004871 xref: GO:0005634 xref: GO:0006355 xref: GO:0007165 xref: IPR:IPR001217 "Transcription factor STAT" xref: IPR:IPR013800 xref: IPR:IPR013801 xref: PFAM:PF01017 "STAT protein, all-alpha domain" xref: PFAM:PF02864 "STAT protein, DNA binding domain" xref: PFAM:PF02865 "STAT protein, protein interaction domain" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-12-15T16:27:39Z [Term] id: SOY:0002172 name: TCP like transcription factor activity namespace: soybean_trait def: "A protein with a TCP domain that effects transcription." [PMID:10363373, PMID:16123132] comment: The TCP family of TFs may affect cell division. The TCP domain may be involved in both DNA interaction and protein dimerization. Members of the TCP family may be either transcriptional activators or repressors. The DNA binding site consensus is GCCCR. xref: GO:0003700 xref: GO:0005515 xref: GO:0016602 xref: IPR:IPR005333 "Transcription factor, TCP" xref: IPR:IPR017887 "Transcription factor TCP subgroup" xref: PFAM:PF03634 "TCP protein domain" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-12-16T09:21:58Z [Term] id: SOY:0002173 name: TIFY like transcription factor activity namespace: soybean_trait def: "A protein with a TIFY domain that effects transcription." [DOI:10.1016/j.tplants.2007.04.004] comment: The TIFY domain consensus is TIF[F/Y]XG. It was previously known as ZIM. synonym: "ZIM" EXACT [] xref: GO:0003700 xref: GO:0005634 xref: GO:0006355 xref: IPR:IPR010399 "TIFY domain" xref: PFAM:PF06200 "Tify domain" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-12-16T09:56:30Z [Term] id: SOY:0002174 name: Trihelix like transcription factor activity namespace: soybean_trait def: "A protein with a trihelix and a long alpha-helical domain that effects transcription." [DOI:10.1016/j.tplants.2011.12.002] comment: The trihelix region is a DNA binding domain that recognizes GTTAC. xref: GO:0003700 xref: GO:0005634 xref: GO:0006355 xref: GO:0043565 xref: IPR:IPR027759 "Trihelix transcription factor GT3" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-12-16T10:42:11Z [Term] id: SOY:0002175 name: TUB like transcription factor activity namespace: soybean_trait def: "A protein with a TUBBY and F-box domain that effects transcription." [DOI:10.​1104/​pp.​103.​037820] comment: The Tubby domain contains two distinct motifs, TUB1 and TUB2. xref: GO:0003700 xref: GO:0006355 xref: GO:0010468 xref: PFAM:PF00646 "F-box domain" xref: PFAM:PF01167 "Tubby protein" xref: PROSITE:PS01200 "TUB1 motif" xref: PROSITE:PS01201 "TUB2 motif" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-12-16T13:32:39Z [Term] id: SOY:0002176 name: ULT like transcription factor activity namespace: soybean_trait def: "A ULTRAPETALA- like protein with a SAND DNA binding domain that effects transcription." [DOI:10.1038/89675, DOI:10.1101/gad.1812609] comment: The SAND domain interacts with DNA through a KDWK motif binding to a TTCG sequence motif. xref: GO:0003700 xref: GO:0005634 xref: GO:0006355 xref: IPR:IPR000770 "SAND domin" is_a: SOY:0002105 ! Transcription factor activity created_by: rexnelson creation_date: 2016-12-16T14:26:15Z [Term] id: SOY:0002177 name: Amylase activity namespace: soybean_trait def: "Endohydrolysis of polysaccharides." [SOY:001] is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2017-03-02T15:16:55Z [Term] id: SOY:0002178 name: Beta-amylase activity namespace: soybean_trait def: "The beta-amylase activity of a plant or plant part." [SOY:001] comment: The Hydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive maltose units from the non-reducing ends of the chains. xref: EC:3.2.1.2 "Beta-amylase" xref: GO:0016161 "Beta-amylase activity" is_a: SOY:0002177 ! Amylase activity created_by: rexnelson creation_date: 2017-03-02T15:21:48Z [Term] id: SOY:0002179 name: Seed beta-conglycinin alpha-subunit protein content namespace: soybean_trait def: "The amount of beta-conglycinin alpha-subunit protein in a plant or plant part." [SOY:001] xref: PO:0009010 "seed" xref: TO:0000710 "globulin protein content" is_a: SOY:0001654 ! Seed beta-conglycinin protein content created_by: rexnelson creation_date: 2017-03-06T14:38:23Z [Term] id: SOY:0002180 name: Metalloendopeptidase activity namespace: soybean_trait def: "The metalloendopeptidase activity of a plant or plant part." [GO:0004222] comment: Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions. xref: GO:0004222 "metalloendopeptidase activity" is_a: SOY:0001920 ! Endopeptidase activity created_by: rexnelson creation_date: 2017-03-07T09:37:09Z [Term] id: SOY:0002181 name: Flavonoid glycoside glycosyltransferase activity namespace: soybean_trait def: "The flavonoid glycoside glycosyltransferase activity of a plant or plant part." [SOY:001] is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2017-03-15T13:20:41Z [Term] id: SOY:0002182 name: Flavonol 3-O-glucoside/galactoside (1->6) glucosyltransferase activity namespace: soybean_trait def: "The flavonol 3-O-glucoside/galactoside (1-6) glucosyltransferase activity of a plant or plant part." [DOI:10.1007/s11103-016-0523-2] synonym: "F3G6Gt" EXACT [DOI:10.1007/s11103-116-0523-2] synonym: "Fg1" EXACT [DOI:10.1007/s11103-116-0523-2] synonym: "quercetin 3-O-glucosyltransferase" EXACT [] xref: GO:0051554 "flavonol metabolic process" xref: GO:0080043 "quercetin 3-O-glucosyltransferase activity" xref: TO:0000071 "anthocyanin content" xref: UGT:UGT79A7 is_a: SOY:0002181 ! Flavonoid glycoside glycosyltransferase activity created_by: rexnelson creation_date: 2017-03-15T13:22:54Z [Term] id: SOY:0002183 name: Flavonol 3-O-glucoside (1->6) rhamnosyltransferase activity namespace: soybean_trait def: "The flavonol 3-O-glucoside (1->6) rhamnosyltransferase activity of a plant or plant part." [SOY:001] synonym: "anthocyanidin 3-O-glucosyltransferase" EXACT [] xref: EC:2.4.1.159 "Flavonol-3-O-glucoside L-rhamnosyltransferase" xref: GO:0047230 "flavonol-3-O-glucoside L-rhamnosyltransferase activity" xref: GO:0051554 "lavonol metabolic process" xref: GO:0080043 "quercetin 3-O-glucosyltransferase activity" is_a: SOY:0002181 ! Flavonoid glycoside glycosyltransferase activity created_by: rexnelson creation_date: 2017-03-15T15:17:44Z [Term] id: SOY:0002184 name: Flavonol 3-O-glucoside/galactoside (1->2) glucosyltransferase activity namespace: soybean_trait def: "The flavonol 3-O-glucoside/galactoside (1->2) glucosyltransferase activity of a plant or plant part." [SOY:001] comment: Catalysis of the reaction: UDP-glucose + a flavonol 3-O-beta-D-glucosyl-(1->2)-beta-D-glucoside = UDP + a flavonol 3-O-beta-D-glucosyl-(1->2)-beta-D-glucosyl-(1->2)-beta-D-glucoside. xref: EC:2.4.1.297 "Anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase" xref: GO:0033838 "flavonol-3-O-glucoside glucosyltransferase activity" is_a: SOY:0002181 ! Flavonoid glycoside glycosyltransferase activity created_by: rexnelson creation_date: 2017-03-15T16:33:12Z [Term] id: SOY:0002185 name: Anthocyanidin reductase activity namespace: soybean_trait def: "The anthocyanidin reductase activity of a plant or plant part." [SOY:001] comment: Catalyzes the reaction: a flavan-3-ol + 2 NAD(P)+ = an anthocyanidin + 2 NAD(P)H + H+. It catalyzes the double reduction of anthocyanidins, producing (2R,3R)-flavan-3-ol monomers required for the formation of proanthocyanidins. synonym: "Banylus" RELATED [] xref: EC:1.3.1.77 "Anthocyanidin reductase ((2R,3R)-flavan-3-ol-forming)" xref: GO:0009812 "flavonoid metabolic process" xref: GO:0033729 "anthocyanidin reductase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2017-03-16T14:56:20Z [Term] id: SOY:0002186 name: Lysine specific demethylase activity namespace: soybean_trait def: "The lysine specific demethylase activity of a plant or plant part." [SOY:001] comment: Functions in H34K histone demethylation. Catalysis of the removal of a methyl group from lysine at position 4 of the histone H3 protein. synonym: "LDL" EXACT [] xref: GO:0032453 "histone demethylase activity (H3-K4 specific)" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2017-03-21T13:54:31Z [Term] id: SOY:0002187 name: Histone H3 activity namespace: soybean_trait def: "Histone H3 activity of a protein." [SOY:001] xref: GO:0003677 "DNA binding" is_a: SOY:0001410 ! Soybean Biochemical Traits created_by: rexnelson creation_date: 2017-03-21T14:11:05Z [Term] id: SOY:0002188 name: Isocitrate dehydrogenase NAD dependent activity namespace: soybean_trait def: "The NAD dependent isocitrate dehydrogenase activity of a plant or plant part." [SOY:001] comment: Catalysis of the reaction: isocitrate + NAD+ = 2-oxoglutarate + CO2 + NADH + H+. xref: GO:0004449 "isocitrate dehydrogenase (NAD+) acitivity" is_a: SOY:0001955 ! Isocitrate dehydrogenase activity created_by: rexnelson creation_date: 2017-03-21T16:24:02Z [Term] id: SOY:0002189 name: Isocitrate dehydrogenase NADP dependent activity namespace: soybean_trait def: "The NADP dependent isocitrate dehydrogenase activity of a plant or plant part." [SOY:001] comment: Catalysis of the reaction: isocitrate + NADP+ = 2-oxoglutarate + CO2 + NADPH + H+. xref: GO:0004450 "isoccitrate dehydrogenase (NADP+) activity" is_a: SOY:0001955 ! Isocitrate dehydrogenase activity created_by: rexnelson creation_date: 2017-03-21T16:29:30Z [Term] id: SOY:0002190 name: Seed development trait namespace: soybean_trait def: "The process whose specific outcome is the progression of the seed over time, from its formation to the mature structure. A seed is a propagating organ formed in the sexual reproductive cycle of gymnosperms and angiosperms, consisting of a protective coat enclosing an embryo and food reserves." [GO:0048316] xref: GO:0048316 "seed development" is_a: SOY:0001408 ! Soybean Growth and Development Traits created_by: rexnelson creation_date: 2017-03-22T16:02:28Z [Term] id: SOY:0002191 name: Seed maturation and dessication trait namespace: soybean_trait def: "Traits that lead to final seed maturation and dessication prior to seed dormancy." [SOY:001] comment: These traits include production of late embronic abundant proteins (LEA's) and proteins that stabilize the desiccated embryo. xref: GO:0009269 "response to desiccation" xref: GO:0009790 "embryo development" is_a: SOY:0002190 ! Seed development trait created_by: rexnelson creation_date: 2017-03-23T09:06:00Z [Term] id: SOY:0002192 name: Ferric leghemoglobin reductase activity namespace: soybean_trait def: "The ferric leghemoglobin reductase activity of a plant or plant part." [SOY:001] comment: Catalysis of the reaction: protein N6-(dihydrolipoyl)lysine + NAD+ = protein N6-(lipoyl)lysine + NADH + H+. xref: EC:1.6.2.6 "leghemoglobin reductase" xref: GO:0004148 "dihydrolipoyl dehdrogenase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2017-03-23T16:46:25Z [Term] id: SOY:0002193 name: Fatty acid desaturase activity namespace: soybean_trait def: "The fatty acid desaturase activity of a plant or plant part." [] comment: Catalyzes the removal of two hydrogen atoms from a fatty acid chain leaving a C=C bond. Commonly separated into two types, delta and omega. Delta FA desaturases create the double bond in the delta orientation whereas the omega desaturases create the double bond at the 3rd and 4th carbon from the methyl end of the fatty acid. xref: GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2017-03-24T10:23:08Z [Term] id: SOY:0002194 name: Sphingolipid delta-8 desaturase activity namespace: soybean_trait def: "The sphingolipid delta-8 desaturase activity of a plant or plant part." [GO:0052631, SOY:001] comment: Catalysis of the formation of a double bond between C8 and C9 of the long chain base of a sphingolipid. For example, sphinganine (d18:0) = 8-sphingenine (d18:1delta8); phytosphinganine (t18:0) = 8-phytosphingenine (t18:1delta8); and 4-sphingenine (18:1delta4) = 4,8-sphingadienine (d18:2delta4,8). synonym: "SLD1" RELATED [] xref: EC:1.14.19.29 "sphingolipid 8-(E/Z)-desaturase" xref: GO:0052631 "sphingolipid delta-8 desaturase activity" is_a: SOY:0002193 ! Fatty acid desaturase activity created_by: rexnelson creation_date: 2017-03-24T14:31:49Z [Term] id: SOY:0002195 name: Delta-8 sphingolipid desaturase activity namespace: soybean_trait def: "The delta-8 sphingolipid desaturase activity of a plant or plant part." [GO:0102003, SOY:001] comment: Catalysis of the reaction: phytosphingosine(1+) + O2 + a reduced electron acceptor <=> 4-hydroxy-trans-8-sphingenine + 2 H2O + an oxidized electron acceptor. xref: EC:1.14.19.4 "Acyl-lipid (11-3)-desaturase" xref: GO:0102003 "Delta8-sphingolipid desaturase activity" is_a: SOY:0002193 ! Fatty acid desaturase activity created_by: rexnelson creation_date: 2017-03-24T15:13:27Z [Term] id: SOY:0002196 name: Magnesium chelatase activity namespace: soybean_trait def: "The magnesium chelatase activity of a plant or plant part." [GO:0016851, SOY:001] comment: Catalysis of the reaction: ATP + H(2)O + Mg(2+) + protoporphyrin IX = ADP + 2 H(+) + magnesium protoporphyrin IX + phosphate. synonym: "magnesium-protoporphyrin IX chelatase" EXACT [] synonym: "Mg-protoporphyrin IX magnesium-lyase" EXACT [] synonym: "protoporphyrin IX Mg-chelatase" EXACT [] xref: EC:6.6.1.1 "magnesium chelatase" xref: GO:0015995 "chlorophyll biosynthetic process" xref: GO:0016851 "magnesium chelatase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2017-03-28T15:00:23Z [Term] id: SOY:0002197 name: Ferredoxin nitrite reductase activity namespace: soybean_trait def: "The Fe-nitrite reductase activity of a plant or plant part." [SOY:001] comment: Catalyzes the reaction NH(3) + 2 H(2)O + 6 oxidized ferredoxin <=> nitrite + 6 reduced ferredoxin + 7 H(+). xref: EC:1.7.7.1 "ferredoxin-nitrite reductase" xref: GO:0048307 "ferredoxin-nitrite reductase" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2017-03-31T09:24:27Z [Term] id: SOY:0002198 name: Acyl-ACP thioesterase activity namespace: soybean_trait def: "The acyl-ACP thioesterase activity of a plant or plant part." [GO:0016790, SOY:001] comment: Catalyzes the reaction: RCO-SR' + H2O = RCOOH + HSR'. This reaction is the hydrolysis of a thiolester bond, an ester formed from a carboxylic acid and a thiol (i.e., RCO-SR'), such as that found in acetyl-coenzyme A. xref: GO:0006633 "fatty acid biosynthetic process" xref: GO:0016790 "thioester hydrolase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2017-03-31T09:59:05Z [Term] id: SOY:0002199 name: Beta-ketoacyl-[acyl-carrier-protein] synthase I activity namespace: soybean_trait def: "The beta-ketoacyl-[acyl-carrier-protein] synthase I activity of a plant or plant part." [GO:0004315, SOY:001] comment: Acyl-[acyl-carrier-protein] + malonyl-[acyl-carrier-protein] <=> 3-oxoacyl-[acyl-carrier-protein] + CO(2) + [acyl-carrier-protein]. Can use fatty acyl thioesters of ACP (C(2) to C(16)) as substrates, as well as fatty acyl thioesters of Co-A (C(4) to C(16)). synonym: "" RELATED [] synonym: "acyl-malonyl(acyl-carrier-protein)-condensing enzyme activity" EXACT [GO:0004315] synonym: "beta-ketoacyl-ACP synthase I activity" RELATED [GO:0004315] synonym: "beta-ketoacyl-acyl carrier protein synthase activity" EXACT [GO:0004315] synonym: "FabB" RELATED [] synonym: "KASI" RELATED [] synonym: "ketoacyl-ACP synthase activity" EXACT [GO:0004315] xref: EC:2.3.1.41 "Beta-ketoacyl-[acyl-carrier-protein] synthase I" xref: GO:0004315 "3-oxoacyl-[acyl-carrier-protein] synthase activity" xref: GO:0006633 "fatty acid biosynthetic process" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2017-03-31T11:06:30Z [Term] id: SOY:0002200 name: Beta-phosphoglucomutase activity namespace: soybean_trait comment: Catalyzes the reaction: beta-D-glucose 1-phosphate = beta-D-glucose 6-phosphate. synonym: "beta-D-glucose 1,6-phosphomutase activity" EXACT [GO:0008801] synonym: "Beta-PGM" EXACT [EC:5.4.2.6] xref: EC:5.4.2.6 "Beta-phosphoglucomutase" xref: GO:0008801 "beta-phosphoglucomutase activity" is_a: SOY:0001969 ! Phosphoglucomutase activity created_by: rexnelson creation_date: 2017-04-26T13:50:49Z [Term] id: SOY:0002201 name: Intramolecular phosphotransferase activity namespace: soybean_trait def: "Intramolecular phosphotransferase activity of a plant or plant part." [] comment: Catalysis of the transfer of a phosphate group from one position to another within a single molecule. xref: GO:0016868 "intramolecular transferase activity, phosphotransferases" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2017-04-26T14:17:35Z [Term] id: SOY:0002202 name: Phosphomannomutase-phosphoglucomutase activity namespace: soybean_trait def: "The phosphomannomutase and phosphoglucomutase activity of a plant or plant part." [] comment: The phosphomannomutase (PMM) / phosphoglucomutase (PGM) is a bifunctional enzyme. Catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e.g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. synonym: "PMM/PGM" EXACT [] synonym: "PMM_PGM" EXACT [] is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2017-04-26T14:29:48Z [Term] id: SOY:0002203 name: Response to red light namespace: soybean_trait def: "The reaction of the plant or plant part to red light." [GO:0009639] comment: Any process that results in a change in state or activity of a plant part or cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red or far red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. Far red light is electromagnetic radiation of wavelength 700-800nm. xref: GO:0009585 "red, far-red light phototransduction" xref: GO:0009639 "response to red or far red light" xref: GO:0009881 "photoreceptor activity" is_a: SOY:0002083 ! Light sensitivity created_by: rexnelson creation_date: 2017-04-27T09:34:39Z [Term] id: SOY:0002204 name: Fungal protein interaction activity namespace: soybean_trait def: "Soybean products that directly interact with proteins of fungal origin." [SOY:001] xref: GO:0098772 "molecular function regulator" is_a: SOY:0001402 ! Fungal Disease Resistance Traits created_by: rexnelson creation_date: 2017-04-28T10:19:34Z [Term] id: SOY:0002205 name: Polygalacturonase inhibitor activity namespace: soybean_trait def: "Stops, prevents or reduces the activity of a polygalacturonase." [GO:0090353] comment: Polygalacturonases catalyze the random hydrolysis of 1,4-alpha-D-galactosiduronic linkages in pectate and other galacturonans. xref: ChEBI:24177 "galactosiduronic acid" xref: EC:3.2.1.15 "polygalcturonase" xref: GO:0090353 "polygalacturonase inhibitor activity" is_a: SOY:0002204 ! Fungal protein interaction activity created_by: rexnelson creation_date: 2017-04-28T10:30:21Z [Term] id: SOY:0002206 name: Potassium channel activity namespace: soybean_trait def: "Enables the facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism." [GO:0005267] xref: GO:0005267 "potassium channel activity" is_a: SOY:0002094 ! Ion transmembrane transporter activity created_by: rexnelson creation_date: 2017-05-01T11:39:56Z [Term] id: SOY:0002207 name: Pyrroline-5-carboxylate reductase activity namespace: soybean_trait def: "The pyrroline-5-carboxylate reductase activity of a plant or plant part." [GO:0004735] comment: Catalyzes the reaction: L-proline + NADP+ = 1-pyrroline-5-carboxylate + NADPH + H+. Also reduces 1-pyrroline-3-hydroxy-5-carboxylate to L-hydroxyproline. synonym: "Delta-1-pyrrolidine-5-carboxylate reductase" RELATED [GO:0055129] xref: CHEBI:15893 "1-pyrroline-5-carboxylate" xref: CHEBI:17203 "L-proline" xref: EC:1.5.1.2 " Pyrroline-5-carboxylate reductase" xref: GO:0004735 "pyrroline-5-carboxylate reductase activity" xref: GO:0055129 "L-proline biosynthetic process" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2017-05-01T14:03:30Z [Term] id: SOY:0002208 name: metal ion transmembrane transporter activity namespace: soybean_trait def: "Enables the transfer of metal ions from one side of a membrane to the other." [GO:0046873] synonym: "heavy metal ion porter activity" BROAD [] synonym: "heavy metal ion transporter activity" BROAD [] xref: GO:0046873 "metal ion transmembrane transporter activity" is_a: SOY:0002055 ! Transporter activity created_by: rexnelson creation_date: 2017-05-03T13:18:07Z [Term] id: SOY:0002209 name: Methyltransferase activity namespace: soybean_trait xref: EC:2.1.1.- xref: GO:0008168 "methyltransferase activity" is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2017-05-03T16:08:37Z [Term] id: SOY:0002210 name: Caffeate O-methyltransferase activity namespace: soybean_trait def: "The caffeate O-methyltransferase activity of a plant or plant part." [SOY:001] comment: Catalyzes the reaction: S-adenosyl-L-methionine + 3,4-dihydroxy-trans-cinnamate = S-adenosyl-L-homocysteine + 3-methoxy-4-hydroxy-trans-cinnamate . synonym: "Anthocyanin O-Methyltransferase" EXACT [] synonym: "OMT5" BROAD [] xref: EC:2.1.1.68 "catteate O-methyltransferase" xref: GO:0047763 "caffeate O-methyltransferase activity" is_a: SOY:0002209 ! Methyltransferase activity created_by: rexnelson creation_date: 2017-05-03T16:14:51Z [Term] id: SOY:0002211 name: Fatty acid binding protein activity namespace: soybean_trait def: "The fatty acid binding activity of a plant or plant part." [SOY:001] comment: Fatty acid binding proteins or FAPs non-covalently associate with fatty acids. synonym: "FABP" EXACT [] synonym: "FAP" EXACT [] is_a: SOY:0001846 ! Enzymatic activity created_by: rexnelson creation_date: 2017-05-08T08:53:37Z [Term] id: SOY:0002212 name: Sodium ion transmembrane transporter activity namespace: soybean_trait def: "The sodium ion transmembrane transporter activity of a plant or plant part." [GO:0015081] comment: Enables the transfer of sodium ions (Na+) from one side of a membrane to the other. xref: GO:0006814 "sodium ion transport" xref: GO:0015081 "sodium ion transmembrane transporter activity" is_a: SOY:0002208 ! metal ion transmembrane transporter activity created_by: rexnelson creation_date: 2017-05-09T11:00:30Z [Typedef] id: measured_in name: measured in namespace: external