[
-
{- "prefLabel": "transcript_region",
-
"synonym": [],-
"definition": [- "This term was added to provide a grouping term for the region parts of transcript, thus giving them an is_a path back to the root.",
- "A region of a transcript."
],- "obsolete": false,
- "@id": "http://purl.obolibrary.org/obo/SO_0000833",
- "@type": "http://www.w3.org/2002/07/owl#Class",
-
"links": {- "self": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000833",
- "ontology": "https://data.agroportal.lirmm.fr/ontologies/SO",
- "children": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000833/children",
- "parents": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000833/parents",
- "descendants": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000833/descendants",
- "ancestors": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000833/ancestors",
- "instances": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000833/instances",
- "tree": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000833/tree",
- "notes": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000833/notes",
- "mappings": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000833/mappings",
- "ui": "http://agroportal.lirmm.fr/ontologies/SO?p=classes&conceptid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000833",
-
"@context": {- "self": "http://www.w3.org/2002/07/owl#Class",
- "ontology": "http://data.bioontology.org/metadata/Ontology",
- "children": "http://www.w3.org/2002/07/owl#Class",
- "parents": "http://www.w3.org/2002/07/owl#Class",
- "descendants": "http://www.w3.org/2002/07/owl#Class",
- "ancestors": "http://www.w3.org/2002/07/owl#Class",
- "instances": "http://data.bioontology.org/metadata/Instance",
- "tree": "http://www.w3.org/2002/07/owl#Class",
- "notes": "http://data.bioontology.org/metadata/Note",
- "mappings": "http://data.bioontology.org/metadata/Mapping",
- "ui": "http://www.w3.org/2002/07/owl#Class"
}
},-
"@context": {}
},-
{- "prefLabel": "biological_region",
-
"synonym": [- "INSDC_note:biological_region",
- "INSDC_misc_feature",
- "biological region"
],-
"definition": [- "A region defined by its disposition to be involved in a biological process."
],- "obsolete": false,
- "@id": "http://purl.obolibrary.org/obo/SO_0001411",
- "@type": "http://www.w3.org/2002/07/owl#Class",
-
"links": {- "self": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0001411",
- "ontology": "https://data.agroportal.lirmm.fr/ontologies/SO",
- "children": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0001411/children",
- "parents": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0001411/parents",
- "descendants": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0001411/descendants",
- "ancestors": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0001411/ancestors",
- "instances": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0001411/instances",
- "tree": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0001411/tree",
- "notes": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0001411/notes",
- "mappings": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0001411/mappings",
- "ui": "http://agroportal.lirmm.fr/ontologies/SO?p=classes&conceptid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0001411",
-
"@context": {- "self": "http://www.w3.org/2002/07/owl#Class",
- "ontology": "http://data.bioontology.org/metadata/Ontology",
- "children": "http://www.w3.org/2002/07/owl#Class",
- "parents": "http://www.w3.org/2002/07/owl#Class",
- "descendants": "http://www.w3.org/2002/07/owl#Class",
- "ancestors": "http://www.w3.org/2002/07/owl#Class",
- "instances": "http://data.bioontology.org/metadata/Instance",
- "tree": "http://www.w3.org/2002/07/owl#Class",
- "notes": "http://data.bioontology.org/metadata/Note",
- "mappings": "http://data.bioontology.org/metadata/Mapping",
- "ui": "http://www.w3.org/2002/07/owl#Class"
}
},-
"@context": {}
},-
{- "prefLabel": "region",
-
"synonym": [],-
"definition": [- "A sequence_feature with an extent greater than zero. A nucleotide region is composed of bases and a polypeptide region is composed of amino acids."
],- "obsolete": false,
- "@id": "http://purl.obolibrary.org/obo/SO_0000001",
- "@type": "http://www.w3.org/2002/07/owl#Class",
-
"links": {- "self": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000001",
- "ontology": "https://data.agroportal.lirmm.fr/ontologies/SO",
- "children": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000001/children",
- "parents": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000001/parents",
- "descendants": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000001/descendants",
- "ancestors": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000001/ancestors",
- "instances": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000001/instances",
- "tree": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000001/tree",
- "notes": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000001/notes",
- "mappings": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000001/mappings",
- "ui": "http://agroportal.lirmm.fr/ontologies/SO?p=classes&conceptid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000001",
-
"@context": {- "self": "http://www.w3.org/2002/07/owl#Class",
- "ontology": "http://data.bioontology.org/metadata/Ontology",
- "children": "http://www.w3.org/2002/07/owl#Class",
- "parents": "http://www.w3.org/2002/07/owl#Class",
- "descendants": "http://www.w3.org/2002/07/owl#Class",
- "ancestors": "http://www.w3.org/2002/07/owl#Class",
- "instances": "http://data.bioontology.org/metadata/Instance",
- "tree": "http://www.w3.org/2002/07/owl#Class",
- "notes": "http://data.bioontology.org/metadata/Note",
- "mappings": "http://data.bioontology.org/metadata/Mapping",
- "ui": "http://www.w3.org/2002/07/owl#Class"
}
},-
"@context": {}
},-
{- "prefLabel": "sequence_feature",
-
"synonym": [- "INSDC_note:other",
- "located sequence feature",
- "located_sequence_feature",
- "INSDC_note:sequence_feature",
- "INSDC_feature:misc_feature",
- "sequence feature"
],-
"definition": [- "Any extent of continuous biological sequence."
],- "obsolete": false,
- "@id": "http://purl.obolibrary.org/obo/SO_0000110",
- "@type": "http://www.w3.org/2002/07/owl#Class",
-
"links": {- "self": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000110",
- "ontology": "https://data.agroportal.lirmm.fr/ontologies/SO",
- "children": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000110/children",
- "parents": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000110/parents",
- "descendants": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000110/descendants",
- "ancestors": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000110/ancestors",
- "instances": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000110/instances",
- "tree": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000110/tree",
- "notes": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000110/notes",
- "mappings": "https://data.agroportal.lirmm.fr/ontologies/SO/classes/http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000110/mappings",
- "ui": "http://agroportal.lirmm.fr/ontologies/SO?p=classes&conceptid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSO_0000110",
-
"@context": {- "self": "http://www.w3.org/2002/07/owl#Class",
- "ontology": "http://data.bioontology.org/metadata/Ontology",
- "children": "http://www.w3.org/2002/07/owl#Class",
- "parents": "http://www.w3.org/2002/07/owl#Class",
- "descendants": "http://www.w3.org/2002/07/owl#Class",
- "ancestors": "http://www.w3.org/2002/07/owl#Class",
- "instances": "http://data.bioontology.org/metadata/Instance",
- "tree": "http://www.w3.org/2002/07/owl#Class",
- "notes": "http://data.bioontology.org/metadata/Note",
- "mappings": "http://data.bioontology.org/metadata/Mapping",
- "ui": "http://www.w3.org/2002/07/owl#Class"
}
},-
"@context": {}
}
]