85
93
93
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000052
PhysicalSubject
'PhysicalSubject' SubClassOf 'MaterialEntity'
'PhysicalSubject' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00009
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000053
PrimaryData
'PrimaryData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00010
'PrimaryData' SubClassOf 'producedByDataAcquisitionProtocol' exactly 1 'DataAcquisitionProtocol'
'PrimaryData' SubClassOf 'DataSubject'
'PrimaryData' SubClassOf 'extractedFromMaterialEntity' exactly 1 'MaterialEntity'
'PrimaryData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00002
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000050
PhysicalSample
'PhysicalSample' SubClassOf 'PhysicalSubject'
'PhysicalSample' SubClassOf 'obtainedFromPhysicalSubject' exactly 1 ('ExtractedSample' or 'SecondaryPhysicalSample')
'PhysicalSample' SubClassOf 'producedByAnalysisProtocol' exactly 1 'AnalysisProtocol'
'PhysicalSample' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00010
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000051
PhysicalSampleFractioning
'PhysicalSampleFractioning' SubClassOf http://edamontology.org/operation_0004
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000205
Gel
'Gel' SubClassOf 'gelDepth' exactly 1 http://www.w3.org/2001/XMLSchema#float
'Gel' SubClassOf 'gelVoltage' exactly 1 http://www.w3.org/2001/XMLSchema#float
'Gel' SubClassOf 'gelWidth' exactly 1 http://www.w3.org/2001/XMLSchema#float
'Gel' SubClassOf 'gelDye' exactly 1 http://www.w3.org/2001/XMLSchema#string
'Gel' SubClassOf 'gelAcrylamidePercent' exactly 1 http://www.w3.org/2001/XMLSchema#float
'Gel' SubClassOf 'isReference' exactly 1 http://www.w3.org/2001/XMLSchema#boolean
'Gel' SubClassOf 'producedByAnalysisProtocol' exactly 1 'Electrophoresis'
'Gel' SubClassOf 'obtainedFromPhysicalSubject' exactly 1 'ProteinSample'
'Gel' SubClassOf 'gelHeight' exactly 1 http://www.w3.org/2001/XMLSchema#float
'Gel' SubClassOf 'PhysicalSample'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000206
EnzymaticActivityResult
'EnzymaticActivityResult' SubClassOf 'PhysicalSample'
'EnzymaticActivityResult' SubClassOf 'obtainedFromPhysicalSubject' exactly 1 'ProteinSample'
'EnzymaticActivityResult' SubClassOf 'producedByAnalysisProtocol' exactly 1 'EnzimaticActivity'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000049
PhysicalAggregate
'PhysicalAggregate' SubClassOf 'PhysicalSubject'
'PhysicalAggregate' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00005
'PhysicalAggregate' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00006 min 1 'PhysicalSubject'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000203
PCRResult
'PCRResult' SubClassOf 'producedByAnalysisProtocol' exactly 1 'PCR'
'PCRResult' SubClassOf 'PhysicalSample'
'PCRResult' SubClassOf 'obtainedFromPhysicalSubject' exactly 1 'DNASample'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000047
PhenomicData
'PhenomicData' SubClassOf 'PrimaryData'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000045
PCR
'PCR' SubClassOf 'AnalysisProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000046
PhenomicAcquisitionProtocol
'PhenomicAcquisitionProtocol' SubClassOf 'DataAcquisitionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000164
GelBand
'GelBand' SubClassOf 'obtainedFromPhysicalSubject' exactly 1 'GelForBands'
'GelBand' SubClassOf 'producedByPhysSampleFractioning' exactly 1 'BandExtraction'
'GelBand' SubClassOf 'SecondaryPhysicalSample'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000044
NaturalProteinModification
'NaturalProteinModification' SubClassOf 'ProteinModification'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000064
BandExtraction
'BandExtraction' SubClassOf 'PhysicalSampleFractioning'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000062
SecondaryPhysicalSample
'SecondaryPhysicalSample' SubClassOf 'producedByPhysSampleFractioning' exactly 1 'PhysicalSampleFractioning'
'SecondaryPhysicalSample' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00010
'SecondaryPhysicalSample' SubClassOf 'PhysicalSubject'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000060
RNAExtraction
'RNAExtraction' SubClassOf 'ExtractionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000058
ProteinFragment
'ProteinFragment' SubClassOf http://edamontology.org/data_0006
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000059
ProteinModification
'ProteinModification' SubClassOf http://edamontology.org/data_0006
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000056
ProteinData
'ProteinData' SubClassOf 'PrimaryData'
'ProteinData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00008 exactly 1 'ProteinAcquisitionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000057
ProteinExtraction
'ProteinExtraction' SubClassOf 'ExtractionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000055
ProteinAcquisitionProtocol
'ProteinAcquisitionProtocol' SubClassOf 'DataAcquisitionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000151
SangerDataAnnotationProcessing
'SangerDataAnnotationProcessing' SubClassOf 'DataAnnotationProcessing'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000150
SangerDataAnnotation
'SangerDataAnnotation' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00007 exactly 1 'SangerData'
'SangerDataAnnotation' SubClassOf 'DataAnnotation'
'SangerDataAnnotation' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00008 exactly 1 'SangerDataAnnotationProcessing'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000029
GelSpot
'GelSpot' SubClassOf 'SecondaryPhysicalSample'
'GelSpot' SubClassOf 'obtainedFromPhysicalSubject' exactly 1 'GelForSpots'
'GelSpot' SubClassOf 'producedByPhysSampleFractioning' exactly 1 'SpotExtraction'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000148
DataAnnotationProcessing
'DataAnnotationProcessing' SubClassOf 'DataProcessing'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000028
FractioningProtocol
'FractioningProtocol' SubClassOf 'ExperimentalTreatment'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000025
ExtractedSample
'ExtractedSample' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00010
'ExtractedSample' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00002
'ExtractedSample' SubClassOf 'extractedFromBioSubject' exactly 1 'BioSubject'
'ExtractedSample' SubClassOf 'producedByExtractionProtocol' exactly 1 'ExtractionProtocol'
'ExtractedSample' SubClassOf 'PhysicalSubject'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000146
NGSDataAnnotation
'NGSDataAnnotation' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00007 exactly 1 'NGSData'
'NGSDataAnnotation' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00008 exactly 1 'NGSDataAnnotationProcessing'
'NGSDataAnnotation' SubClassOf 'DataAnnotation'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000026
ExtractionProtocol
'ExtractionProtocol' SubClassOf http://edamontology.org/operation_0004
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000147
DataSample
'DataSample' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00008 exactly 1 'DataProcessing'
'DataSample' SubClassOf 'DataSubject'
'DataSample' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00007 exactly 1 'DataSubject'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000024
GrowthEnvironment
'GrowthEnvironment' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00004
'GrowthEnvironment' SubClassOf 'hasPlantTreatment' some http://purl.obolibrary.org/obo/EO_0001001
'GrowthEnvironment' SubClassOf 'hasStudyType' some http://purl.obolibrary.org/obo/EO_0007231
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000022
EnzimaticActivity
'EnzimaticActivity' SubClassOf 'AnalysisProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000041
MechanicalFractioning
'MechanicalFractioning' SubClassOf 'FractioningProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000160
BandSegment
'BandSegment' SubClassOf 'ImageSegment'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000040
MaterialEntity
'MaterialEntity' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00002
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000038
MSProteinData
'MSProteinData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00006 min 1 'ProteinFragment'
'MSProteinData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00004
'MSProteinData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00007 exactly 1 'GelSpot'
'MSProteinData' SubClassOf 'ProteinData'
'MSProteinData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00008 exactly 1 'MassSpectrometry'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000159
GelDataForBands
'GelDataForBands' SubClassOf 'extractedFromMaterialEntity' exactly 1 'GelForBands'
'GelDataForBands' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00006 min 1 'BandSegment'
'GelDataForBands' SubClassOf 'StructuredImageData'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000039
MassSpectrometry
'MassSpectrometry' SubClassOf 'hasMassSpecInstrument' some 'MassSpectrometryInstrument'
'MassSpectrometry' SubClassOf 'hasProteinModification' exactly 1 'ProteinModificationList'
'MassSpectrometry' SubClassOf 'ProteinAcquisitionProtocol'
'MassSpectrometry' SubClassOf 'hasProteolyticEnzyme' exactly 1 'ProteolyticEnzyme'
'MassSpectrometry' SubClassOf 'hasInstrumentType' exactly 1 'InstrumentType'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000036
MSDataAnnotation
'MSDataAnnotation' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00008 exactly 1 'MSDataAnnotationProcessing'
'MSDataAnnotation' SubClassOf 'DataAnnotation'
'MSDataAnnotation' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00007 exactly 1 'MSProteinData'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000037
MSDataAnnotationProcessing
'MSDataAnnotationProcessing' SubClassOf 'DataAnnotationProcessing'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000034
ImageSegment
'ImageSegment' SubClassOf http://edamontology.org/data_0006
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000155
RNASample
'RNASample' SubClassOf 'ExtractedSample'
'RNASample' SubClassOf 'producedByExtractionProtocol' exactly 1 'RNAExtraction'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000156
DNASample
'DNASample' SubClassOf 'ExtractedSample'
'DNASample' SubClassOf 'producedByExtractionProtocol' exactly 1 'DNAExtraction'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000032
ImageAcquisitionProtocol
'ImageAcquisitionProtocol' SubClassOf 'DataAcquisitionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000033
ImageData
'ImageData' SubClassOf 'PrimaryData'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000154
ProteinSample
'ProteinSample' SubClassOf 'ExtractedSample'
'ProteinSample' SubClassOf 'producedByExtractionProtocol' exactly 1 'ProteinExtraction'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000007
BioSubject
'BioSubject' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00009
'BioSubject' SubClassOf 'MaterialEntity'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000128
CellCountingProtocol
'CellCountingProtocol' SubClassOf 'DataAcquisitionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000005
BioAggregate
'BioAggregate' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00006 min 1 'BioSubject'
'BioAggregate' SubClassOf 'BioSubject'
'BioAggregate' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00005
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000126
hiSeqProtocol
'hiSeqProtocol' SubClassOf 'NGSProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000006
BioSample
'BioSample' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00010
'BioSample' SubClassOf 'obtainedFromBioSubject' exactly 1 'BioSubject'
'BioSample' SubClassOf 'hasStructure' max 1 http://purl.obolibrary.org/obo/PO_0009011
'BioSample' SubClassOf 'BioSubject'
'BioSample' SubClassOf 'producedByExpTreatment' exactly 1 'ExperimentalTreatment'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000127
NGSDataAnnotationProcessing
'NGSDataAnnotationProcessing' SubClassOf 'DataAnnotationProcessing'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000003
AnalysisProtocol
'AnalysisProtocol' SubClassOf http://edamontology.org/operation_0004
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000124
NGSProtocol
'NGSProtocol' SubClassOf 'SequencingProtocol'
http://purl.obolibrary.org/obo/EO_0007175
http://purl.obolibrary.org/obo/EO_0007175 SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#minCelsius max 1 http://www.w3.org/2001/XMLSchema#decimal
http://purl.obolibrary.org/obo/EO_0007175 SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#maxCelsius max 1 http://www.w3.org/2001/XMLSchema#decimal
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000125
SangerProtocol
'SangerProtocol' SubClassOf 'SequencingProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000001
GelDataForSpots
'GelDataForSpots' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00006 min 1 'SpotSegment'
'GelDataForSpots' SubClassOf 'StructuredImageData'
'GelDataForSpots' SubClassOf 'extractedFromMaterialEntity' exactly 1 'GelForSpots'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000122
NGSData
'NGSData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00008 exactly 1 'NGSProtocol'
'NGSData' SubClassOf 'extractedFromMaterialEntity' exactly 1 ('RNASample' or 'DNASample')
'NGSData' SubClassOf 'SequenceData'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000120
SequenceData
'SequenceData' SubClassOf 'PrimaryData'
'SequenceData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00008 exactly 1 'SequencingProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000121
SangerData
'SangerData' SubClassOf 'extractedFromMaterialEntity' exactly 1 'GelBand'
'SangerData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00008 exactly 1 'SangerProtocol'
'SangerData' SubClassOf 'SequenceData'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000019
Electrophoresis
'Electrophoresis' SubClassOf 'AnalysisProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000016
DataSubject
'DataSubject' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00009
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000014
DataProcessing
'DataProcessing' SubClassOf http://edamontology.org/operation_0004
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000135
ProteinModificationList
'ProteinModificationList' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00006 min 1 'ProteinModification'
'ProteinModificationList' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00004
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000015
DataAnnotation
'DataAnnotation' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00010
'DataAnnotation' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00008 exactly 1 'DataAnnotationProcessing'
'DataAnnotation' SubClassOf 'DataSample'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000012
DataAcquisitionProtocol
'DataAcquisitionProtocol' SubClassOf http://edamontology.org/operation_0004
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000013
DataAggregate
'DataAggregate' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00006 min 1 'DataSubject'
'DataAggregate' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00005
'DataAggregate' SubClassOf 'DataSubject'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000010
CytologyData
'CytologyData' SubClassOf 'PrimaryData'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000011
DNAExtraction
'DNAExtraction' SubClassOf 'ExtractionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000070
SyntheticProteinModification
'SyntheticProteinModification' SubClassOf 'ProteinModification'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000069
StructuredImageData
'StructuredImageData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00006 min 1 'ImageSegment'
'StructuredImageData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00008 exactly 1 'ImageAcquisitionProtocol'
'StructuredImageData' SubClassOf 'ImageData'
'StructuredImageData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00004
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000223
GelForBands
'GelForBands' SubClassOf 'Gel'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000067
SpotExtraction
'SpotExtraction' SubClassOf 'PhysicalSampleFractioning'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000068
SpotSegment
'SpotSegment' SubClassOf 'ImageSegment'
'SpotSegment' SubClassOf 'refersToSpot' exactly 1 'GelSpot'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000222
GelForSpots
'GelForSpots' SubClassOf 'gelpHStrip' exactly 1 http://www.w3.org/2001/XMLSchema#string
'GelForSpots' SubClassOf 'Gel'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000065
Specimen
'Specimen' SubClassOf 'hasProgeny' max 1 'Specimen'
'Specimen' SubClassOf 'isCloneOf' max 1 'Specimen'
'Specimen' SubClassOf 'BioSubject'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000186
ExperimentalTreatment
'ExperimentalTreatment' SubClassOf http://edamontology.org/operation_0004
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000187
EnvironmentalChange
'EnvironmentalChange' SubClassOf 'ExperimentalTreatment'
'EnvironmentalChange' SubClassOf 'hasGrowthEnvironment' exactly 1 'GrowthEnvironment'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000119
SequencingProtocol
'SequencingProtocol' SubClassOf 'DataAcquisitionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000118
RNALabChip
'RNALabChip' SubClassOf 'BioAnalyzerProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000116
BioAnalyzerData
'BioAnalyzerData' SubClassOf 'PrimaryData'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000113
BioAnalyzerProtocol
'BioAnalyzerProtocol' SubClassOf 'DataAcquisitionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000114
ElectropherogramData
'ElectropherogramData' SubClassOf 'BioAnalyzerData'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000112
FixationProtocol
'FixationProtocol' SubClassOf http://edamontology.org/operation_0004
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000230
MassSpectrometryInstrument
'MassSpectrometryInstrument' SubClassOf 'hasMassAnalyzerType' some http://purl.obolibrary.org/obo/MS_1000443
'MassSpectrometryInstrument' SubClassOf 'hasSoftware' some http://purl.obolibrary.org/obo/MS_1000531
'MassSpectrometryInstrument' SubClassOf 'hasIonizationType' some http://purl.obolibrary.org/obo/MS_1000008
'MassSpectrometryInstrument' SubClassOf 'hasInstrumentModel' some http://purl.obolibrary.org/obo/MS_1000031
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000059
ProteinModification
'ProteinModification' SubClassOf http://edamontology.org/data_0006
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000060
RNAExtraction
'RNAExtraction' SubClassOf 'ExtractionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000067
SpotExtraction
'SpotExtraction' SubClassOf 'PhysicalSampleFractioning'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000187
EnvironmentalChange
'EnvironmentalChange' SubClassOf 'ExperimentalTreatment'
'EnvironmentalChange' SubClassOf 'hasGrowthEnvironment' exactly 1 'GrowthEnvironment'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000069
StructuredImageData
'StructuredImageData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00006 min 1 'ImageSegment'
'StructuredImageData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00004
'StructuredImageData' SubClassOf 'ImageData'
'StructuredImageData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00008 exactly 1 'ImageAcquisitionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000223
GelForBands
'GelForBands' SubClassOf 'Gel'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000068
SpotSegment
'SpotSegment' SubClassOf 'refersToSpot' exactly 1 'GelSpot'
'SpotSegment' SubClassOf 'ImageSegment'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000222
GelForSpots
'GelForSpots' SubClassOf 'gelpHStrip' exactly 1 http://www.w3.org/2001/XMLSchema#string
'GelForSpots' SubClassOf 'Gel'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000062
SecondaryPhysicalSample
'SecondaryPhysicalSample' SubClassOf 'producedByPhysSampleFractioning' exactly 1 'PhysicalSampleFractioning'
'SecondaryPhysicalSample' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00010
'SecondaryPhysicalSample' SubClassOf 'PhysicalSubject'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000065
Specimen
'Specimen' SubClassOf 'hasProgeny' max 1 'Specimen'
'Specimen' SubClassOf 'isCloneOf' max 1 'Specimen'
'Specimen' SubClassOf 'BioSubject'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000186
ExperimentalTreatment
'ExperimentalTreatment' SubClassOf http://edamontology.org/operation_0004
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000064
BandExtraction
'BandExtraction' SubClassOf 'PhysicalSampleFractioning'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000228
ProteolyticEnzyme
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00005
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00009
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000070
SyntheticProteinModification
'SyntheticProteinModification' SubClassOf 'ProteinModification'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00010
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000113
BioAnalyzerProtocol
'BioAnalyzerProtocol' SubClassOf 'DataAcquisitionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000112
FixationProtocol
'FixationProtocol' SubClassOf http://edamontology.org/operation_0004
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000230
MassSpectrometryInstrument
'MassSpectrometryInstrument' SubClassOf 'hasMassAnalyzerType' some http://purl.obolibrary.org/obo/MS_1000443
'MassSpectrometryInstrument' SubClassOf 'hasSoftware' some http://purl.obolibrary.org/obo/MS_1000531
'MassSpectrometryInstrument' SubClassOf 'hasIonizationType' some http://purl.obolibrary.org/obo/MS_1000008
'MassSpectrometryInstrument' SubClassOf 'hasInstrumentModel' some http://purl.obolibrary.org/obo/MS_1000031
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000038
MSProteinData
'MSProteinData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00008 exactly 1 'MassSpectrometry'
'MSProteinData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00006 min 1 'ProteinFragment'
'MSProteinData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00004
'MSProteinData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00007 exactly 1 'GelSpot'
'MSProteinData' SubClassOf 'ProteinData'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000159
GelDataForBands
'GelDataForBands' SubClassOf 'extractedFromMaterialEntity' exactly 1 'GelForBands'
'GelDataForBands' SubClassOf 'StructuredImageData'
'GelDataForBands' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00006 min 1 'BandSegment'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000037
MSDataAnnotationProcessing
'MSDataAnnotationProcessing' SubClassOf 'DataAnnotationProcessing'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000039
MassSpectrometry
'MassSpectrometry' SubClassOf 'hasMassSpecInstrument' some 'MassSpectrometryInstrument'
'MassSpectrometry' SubClassOf 'hasProteinModification' exactly 1 'ProteinModificationList'
'MassSpectrometry' SubClassOf 'ProteinAcquisitionProtocol'
'MassSpectrometry' SubClassOf 'hasInstrumentType' exactly 1 'InstrumentType'
'MassSpectrometry' SubClassOf 'hasProteolyticEnzyme' exactly 1 'ProteolyticEnzyme'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000160
BandSegment
'BandSegment' SubClassOf 'ImageSegment'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00002
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00004
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000045
PCR
'PCR' SubClassOf 'AnalysisProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000044
NaturalProteinModification
'NaturalProteinModification' SubClassOf 'ProteinModification'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000047
PhenomicData
'PhenomicData' SubClassOf 'PrimaryData'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000046
PhenomicAcquisitionProtocol
'PhenomicAcquisitionProtocol' SubClassOf 'DataAcquisitionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000041
MechanicalFractioning
'MechanicalFractioning' SubClassOf 'FractioningProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000040
MaterialEntity
'MaterialEntity' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00002
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000164
GelBand
'GelBand' SubClassOf 'obtainedFromPhysicalSubject' exactly 1 'GelForBands'
'GelBand' SubClassOf 'producedByPhysSampleFractioning' exactly 1 'BandExtraction'
'GelBand' SubClassOf 'SecondaryPhysicalSample'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000206
EnzymaticActivityResult
'EnzymaticActivityResult' SubClassOf 'PhysicalSample'
'EnzymaticActivityResult' SubClassOf 'obtainedFromPhysicalSubject' exactly 1 'ProteinSample'
'EnzymaticActivityResult' SubClassOf 'producedByAnalysisProtocol' exactly 1 'EnzimaticActivity'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000049
PhysicalAggregate
'PhysicalAggregate' SubClassOf 'PhysicalSubject'
'PhysicalAggregate' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00006 min 1 'PhysicalSubject'
'PhysicalAggregate' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00005
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000203
PCRResult
'PCRResult' SubClassOf 'producedByAnalysisProtocol' exactly 1 'PCR'
'PCRResult' SubClassOf 'PhysicalSample'
'PCRResult' SubClassOf 'obtainedFromPhysicalSubject' exactly 1 'DNASample'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000205
Gel
'Gel' SubClassOf 'gelDepth' exactly 1 http://www.w3.org/2001/XMLSchema#float
'Gel' SubClassOf 'gelWidth' exactly 1 http://www.w3.org/2001/XMLSchema#float
'Gel' SubClassOf 'gelDye' exactly 1 http://www.w3.org/2001/XMLSchema#string
'Gel' SubClassOf 'gelVoltage' exactly 1 http://www.w3.org/2001/XMLSchema#float
'Gel' SubClassOf 'producedByAnalysisProtocol' exactly 1 'Electrophoresis'
'Gel' SubClassOf 'gelAcrylamidePercent' exactly 1 http://www.w3.org/2001/XMLSchema#float
'Gel' SubClassOf 'obtainedFromPhysicalSubject' exactly 1 'ProteinSample'
'Gel' SubClassOf 'gelHeight' exactly 1 http://www.w3.org/2001/XMLSchema#float
'Gel' SubClassOf 'PhysicalSample'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000050
PhysicalSample
'PhysicalSample' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00010
'PhysicalSample' SubClassOf 'PhysicalSubject'
'PhysicalSample' SubClassOf 'obtainedFromPhysicalSubject' exactly 1 ('ExtractedSample' or 'SecondaryPhysicalSample')
'PhysicalSample' SubClassOf 'producedByAnalysisProtocol' exactly 1 'AnalysisProtocol'
http://purl.obolibrary.org/obo/EO_0001002
http://purl.obolibrary.org/obo/EO_0001002 SubClassOf http://edamontology.org/data_0006
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000056
ProteinData
'ProteinData' SubClassOf 'PrimaryData'
'ProteinData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00008 exactly 1 'ProteinAcquisitionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000055
ProteinAcquisitionProtocol
'ProteinAcquisitionProtocol' SubClassOf 'DataAcquisitionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000058
ProteinFragment
'ProteinFragment' SubClassOf http://edamontology.org/data_0006
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000057
ProteinExtraction
'ProteinExtraction' SubClassOf 'ExtractionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000052
PhysicalSubject
'PhysicalSubject' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00009
'PhysicalSubject' SubClassOf 'MaterialEntity'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000051
PhysicalSampleFractioning
'PhysicalSampleFractioning' SubClassOf http://edamontology.org/operation_0004
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000053
PrimaryData
'PrimaryData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00002
'PrimaryData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00010
'PrimaryData' SubClassOf 'producedByDataAcquisitionProtocol' exactly 1 'DataAcquisitionProtocol'
'PrimaryData' SubClassOf 'DataSubject'
'PrimaryData' SubClassOf 'extractedFromMaterialEntity' exactly 1 'MaterialEntity'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000019
Electrophoresis
'Electrophoresis' SubClassOf 'AnalysisProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000016
DataSubject
'DataSubject' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00009
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000015
DataAnnotation
'DataAnnotation' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00008 exactly 1 'DataAnnotationProcessing'
'DataAnnotation' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00010
'DataAnnotation' SubClassOf 'DataSample'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000018
DevelopmentalStage
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000022
EnzimaticActivity
'EnzimaticActivity' SubClassOf 'AnalysisProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000025
ExtractedSample
'ExtractedSample' SubClassOf 'extractedFromBioSubject' exactly 1 'BioSubject'
'ExtractedSample' SubClassOf 'producedByExtractionProtocol' exactly 1 'ExtractionProtocol'
'ExtractedSample' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00010
'ExtractedSample' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00002
'ExtractedSample' SubClassOf 'PhysicalSubject'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000146
NGSDataAnnotation
'NGSDataAnnotation' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00007 exactly 1 'NGSData'
'NGSDataAnnotation' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00008 exactly 1 'NGSDataAnnotationProcessing'
'NGSDataAnnotation' SubClassOf 'DataAnnotation'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000024
GrowthEnvironment
'GrowthEnvironment' SubClassOf 'hasPlantTreatment' some http://purl.obolibrary.org/obo/EO_0001001
'GrowthEnvironment' SubClassOf 'hasStudyType' some http://purl.obolibrary.org/obo/EO_0007231
'GrowthEnvironment' SubClassOf 'hasPlantGrowthEnvironment' some http://purl.obolibrary.org/obo/EO_0001002
'GrowthEnvironment' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00004
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000148
DataAnnotationProcessing
'DataAnnotationProcessing' SubClassOf 'DataProcessing'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000026
ExtractionProtocol
'ExtractionProtocol' SubClassOf http://edamontology.org/operation_0004
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000147
DataSample
'DataSample' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00008 exactly 1 'DataProcessing'
'DataSample' SubClassOf 'DataSubject'
'DataSample' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00007 exactly 1 'DataSubject'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000029
GelSpot
'GelSpot' SubClassOf 'SecondaryPhysicalSample'
'GelSpot' SubClassOf 'obtainedFromPhysicalSubject' exactly 1 'GelForSpots'
'GelSpot' SubClassOf 'producedByPhysSampleFractioning' exactly 1 'SpotExtraction'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000028
FractioningProtocol
'FractioningProtocol' SubClassOf 'ExperimentalTreatment'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000034
ImageSegment
'ImageSegment' SubClassOf http://edamontology.org/data_0006
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000155
RNASample
'RNASample' SubClassOf 'ExtractedSample'
'RNASample' SubClassOf 'producedByExtractionProtocol' exactly 1 'RNAExtraction'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000033
ImageData
'ImageData' SubClassOf 'PrimaryData'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000154
ProteinSample
'ProteinSample' SubClassOf 'ExtractedSample'
'ProteinSample' SubClassOf 'producedByExtractionProtocol' exactly 1 'ProteinExtraction'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000036
MSAnnotation
'MSAnnotation' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00008 exactly 1 'MSDataAnnotationProcessing'
'MSAnnotation' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00007 exactly 1 'MSProteinData'
'MSAnnotation' SubClassOf 'DataAnnotation'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000156
DNASample
'DNASample' SubClassOf 'ExtractedSample'
'DNASample' SubClassOf 'producedByExtractionProtocol' exactly 1 'DNAExtraction'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000151
SangerDataAnnotationProcessing
'SangerDataAnnotationProcessing' SubClassOf 'DataAnnotationProcessing'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000150
SangerDataAnnotation
'SangerDataAnnotation' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00007 exactly 1 'SangerData'
'SangerDataAnnotation' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00008 exactly 1 'SangerDataAnnotationProcessing'
'SangerDataAnnotation' SubClassOf 'DataAnnotation'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000032
ImageAcquisitionProtocol
'ImageAcquisitionProtocol' SubClassOf 'DataAcquisitionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000119
SequencingProtocol
'SequencingProtocol' SubClassOf 'DataAcquisitionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000118
RNALabChip
'RNALabChip' SubClassOf 'BioAnalyzerProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000114
ElectropherogramData
'ElectropherogramData' SubClassOf 'BioAnalyzerData'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000235
InstrumentType
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000116
BioAnalyzerData
'BioAnalyzerData' SubClassOf 'PrimaryData'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000001
GelDataForSpots
'GelDataForSpots' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00006 min 1 'SpotSegment'
'GelDataForSpots' SubClassOf 'StructuredImageData'
'GelDataForSpots' SubClassOf 'extractedFromMaterialEntity' exactly 1 'GelForSpots'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000122
NGSData
'NGSData' SubClassOf 'extractedFromMaterialEntity' exactly 1 ('RNASample' or 'DNASample')
'NGSData' SubClassOf 'SequenceData'
'NGSData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00008 exactly 1 'NGSProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000121
SangerData
'SangerData' SubClassOf 'extractedFromMaterialEntity' exactly 1 'GelBand'
'SangerData' SubClassOf 'SequenceData'
'SangerData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00008 exactly 1 'SangerProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000003
AnalysisProtocol
'AnalysisProtocol' SubClassOf http://edamontology.org/operation_0004
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000124
NGSProtocol
'NGSProtocol' SubClassOf 'SequencingProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000120
SequenceData
'SequenceData' SubClassOf 'PrimaryData'
'SequenceData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00008 exactly 1 'SequencingProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000005
BioAggregate
'BioAggregate' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00006 min 1 'BioSubject'
'BioAggregate' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00005
'BioAggregate' SubClassOf 'BioSubject'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000126
hiSeqProtocol
'hiSeqProtocol' SubClassOf 'NGSProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000125
SangerProtocol
'SangerProtocol' SubClassOf 'SequencingProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000007
BioSubject
'BioSubject' SubClassOf 'MaterialEntity'
'BioSubject' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00009
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000128
CellCountingProtocol
'CellCountingProtocol' SubClassOf 'DataAcquisitionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000006
BioSample
'BioSample' SubClassOf 'obtainedFromBioSubject' exactly 1 'BioSubject'
'BioSample' SubClassOf 'hasStructure' max 1 http://purl.obolibrary.org/obo/PO_0009011
'BioSample' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00010
'BioSample' SubClassOf 'BioSubject'
'BioSample' SubClassOf 'producedByExpTreatment' exactly 1 'ExperimentalTreatment'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000127
NGSDataAnnotationProcessing
'NGSDataAnnotationProcessing' SubClassOf 'DataAnnotationProcessing'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000012
DataAcquisitionProtocol
'DataAcquisitionProtocol' SubClassOf http://edamontology.org/operation_0004
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000011
DNAExtraction
'DNAExtraction' SubClassOf 'ExtractionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000014
DataProcessing
'DataProcessing' SubClassOf http://edamontology.org/operation_0004
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000135
ProteinModificationList
'ProteinModificationList' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00006 min 1 'ProteinModification'
'ProteinModificationList' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00004
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000013
DataAggregate
'DataAggregate' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00006 min 1 'DataSubject'
'DataAggregate' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PipelinePatterns.owl#P:00005
'DataAggregate' SubClassOf 'DataSubject'
https://bitbucket.org/PlantExpAssay/ontology/raw/v0.1/PlantExperimentalAssayOntology.owl#PEAO:000010
CytologyData
'CytologyData' SubClassOf 'PrimaryData'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000052
PhysicalSubject
'PhysicalSubject' SubClassOf 'MaterialEntity'
'PhysicalSubject' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00009
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000053
PrimaryData
'PrimaryData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00010
'PrimaryData' SubClassOf 'producedByDataAcquisitionProtocol' exactly 1 'DataAcquisitionProtocol'
'PrimaryData' SubClassOf 'DataSubject'
'PrimaryData' SubClassOf 'extractedFromMaterialEntity' exactly 1 'MaterialEntity'
'PrimaryData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00002
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000050
PhysicalSample
'PhysicalSample' SubClassOf 'PhysicalSubject'
'PhysicalSample' SubClassOf 'obtainedFromPhysicalSubject' exactly 1 ('ExtractedSample' or 'SecondaryPhysicalSample')
'PhysicalSample' SubClassOf 'producedByAnalysisProtocol' exactly 1 'AnalysisProtocol'
'PhysicalSample' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00010
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000051
PhysicalSampleFractioning
'PhysicalSampleFractioning' SubClassOf http://edamontology.org/operation_0004
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000205
Gel
'Gel' SubClassOf 'gelDepth' exactly 1 http://www.w3.org/2001/XMLSchema#float
'Gel' SubClassOf 'gelVoltage' exactly 1 http://www.w3.org/2001/XMLSchema#float
'Gel' SubClassOf 'gelWidth' exactly 1 http://www.w3.org/2001/XMLSchema#float
'Gel' SubClassOf 'gelDye' exactly 1 http://www.w3.org/2001/XMLSchema#string
'Gel' SubClassOf 'gelAcrylamidePercent' exactly 1 http://www.w3.org/2001/XMLSchema#float
'Gel' SubClassOf 'isReference' exactly 1 http://www.w3.org/2001/XMLSchema#boolean
'Gel' SubClassOf 'producedByAnalysisProtocol' exactly 1 'Electrophoresis'
'Gel' SubClassOf 'obtainedFromPhysicalSubject' exactly 1 'ProteinSample'
'Gel' SubClassOf 'gelHeight' exactly 1 http://www.w3.org/2001/XMLSchema#float
'Gel' SubClassOf 'PhysicalSample'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000206
EnzymaticActivityResult
'EnzymaticActivityResult' SubClassOf 'PhysicalSample'
'EnzymaticActivityResult' SubClassOf 'obtainedFromPhysicalSubject' exactly 1 'ProteinSample'
'EnzymaticActivityResult' SubClassOf 'producedByAnalysisProtocol' exactly 1 'EnzimaticActivity'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000049
PhysicalAggregate
'PhysicalAggregate' SubClassOf 'PhysicalSubject'
'PhysicalAggregate' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00005
'PhysicalAggregate' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00006 min 1 'PhysicalSubject'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000203
PCRResult
'PCRResult' SubClassOf 'producedByAnalysisProtocol' exactly 1 'PCR'
'PCRResult' SubClassOf 'PhysicalSample'
'PCRResult' SubClassOf 'obtainedFromPhysicalSubject' exactly 1 'DNASample'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000047
PhenomicData
'PhenomicData' SubClassOf 'PrimaryData'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000045
PCR
'PCR' SubClassOf 'AnalysisProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000046
PhenomicAcquisitionProtocol
'PhenomicAcquisitionProtocol' SubClassOf 'DataAcquisitionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000164
GelBand
'GelBand' SubClassOf 'obtainedFromPhysicalSubject' exactly 1 'GelForBands'
'GelBand' SubClassOf 'producedByPhysSampleFractioning' exactly 1 'BandExtraction'
'GelBand' SubClassOf 'SecondaryPhysicalSample'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000044
NaturalProteinModification
'NaturalProteinModification' SubClassOf 'ProteinModification'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000064
BandExtraction
'BandExtraction' SubClassOf 'PhysicalSampleFractioning'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000062
SecondaryPhysicalSample
'SecondaryPhysicalSample' SubClassOf 'producedByPhysSampleFractioning' exactly 1 'PhysicalSampleFractioning'
'SecondaryPhysicalSample' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00010
'SecondaryPhysicalSample' SubClassOf 'PhysicalSubject'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000060
RNAExtraction
'RNAExtraction' SubClassOf 'ExtractionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000058
ProteinFragment
'ProteinFragment' SubClassOf http://edamontology.org/data_0006
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000059
ProteinModification
'ProteinModification' SubClassOf http://edamontology.org/data_0006
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000056
ProteinData
'ProteinData' SubClassOf 'PrimaryData'
'ProteinData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00008 exactly 1 'ProteinAcquisitionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000057
ProteinExtraction
'ProteinExtraction' SubClassOf 'ExtractionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000055
ProteinAcquisitionProtocol
'ProteinAcquisitionProtocol' SubClassOf 'DataAcquisitionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000151
SangerDataAnnotationProcessing
'SangerDataAnnotationProcessing' SubClassOf 'DataAnnotationProcessing'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000150
SangerDataAnnotation
'SangerDataAnnotation' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00007 exactly 1 'SangerData'
'SangerDataAnnotation' SubClassOf 'DataAnnotation'
'SangerDataAnnotation' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00008 exactly 1 'SangerDataAnnotationProcessing'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000029
GelSpot
'GelSpot' SubClassOf 'SecondaryPhysicalSample'
'GelSpot' SubClassOf 'obtainedFromPhysicalSubject' exactly 1 'GelForSpots'
'GelSpot' SubClassOf 'producedByPhysSampleFractioning' exactly 1 'SpotExtraction'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000148
DataAnnotationProcessing
'DataAnnotationProcessing' SubClassOf 'DataProcessing'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000028
FractioningProtocol
'FractioningProtocol' SubClassOf 'ExperimentalTreatment'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000025
ExtractedSample
'ExtractedSample' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00010
'ExtractedSample' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00002
'ExtractedSample' SubClassOf 'extractedFromBioSubject' exactly 1 'BioSubject'
'ExtractedSample' SubClassOf 'producedByExtractionProtocol' exactly 1 'ExtractionProtocol'
'ExtractedSample' SubClassOf 'PhysicalSubject'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000146
NGSDataAnnotation
'NGSDataAnnotation' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00007 exactly 1 'NGSData'
'NGSDataAnnotation' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00008 exactly 1 'NGSDataAnnotationProcessing'
'NGSDataAnnotation' SubClassOf 'DataAnnotation'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000026
ExtractionProtocol
'ExtractionProtocol' SubClassOf http://edamontology.org/operation_0004
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000147
DataSample
'DataSample' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00008 exactly 1 'DataProcessing'
'DataSample' SubClassOf 'DataSubject'
'DataSample' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00007 exactly 1 'DataSubject'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000024
GrowthEnvironment
'GrowthEnvironment' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00004
'GrowthEnvironment' SubClassOf 'hasPlantTreatment' some http://purl.obolibrary.org/obo/EO_0001001
'GrowthEnvironment' SubClassOf 'hasStudyType' some http://purl.obolibrary.org/obo/EO_0007231
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000022
EnzimaticActivity
'EnzimaticActivity' SubClassOf 'AnalysisProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000041
MechanicalFractioning
'MechanicalFractioning' SubClassOf 'FractioningProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000160
BandSegment
'BandSegment' SubClassOf 'ImageSegment'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000040
MaterialEntity
'MaterialEntity' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00002
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000038
MSProteinData
'MSProteinData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00006 min 1 'ProteinFragment'
'MSProteinData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00004
'MSProteinData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00007 exactly 1 'GelSpot'
'MSProteinData' SubClassOf 'ProteinData'
'MSProteinData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00008 exactly 1 'MassSpectrometry'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000159
GelDataForBands
'GelDataForBands' SubClassOf 'extractedFromMaterialEntity' exactly 1 'GelForBands'
'GelDataForBands' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00006 min 1 'BandSegment'
'GelDataForBands' SubClassOf 'StructuredImageData'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000039
MassSpectrometry
'MassSpectrometry' SubClassOf 'hasMassSpecInstrument' some 'MassSpectrometryInstrument'
'MassSpectrometry' SubClassOf 'hasProteinModification' exactly 1 'ProteinModificationList'
'MassSpectrometry' SubClassOf 'ProteinAcquisitionProtocol'
'MassSpectrometry' SubClassOf 'hasProteolyticEnzyme' exactly 1 'ProteolyticEnzyme'
'MassSpectrometry' SubClassOf 'hasInstrumentType' exactly 1 'InstrumentType'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000036
MSDataAnnotation
'MSDataAnnotation' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00008 exactly 1 'MSDataAnnotationProcessing'
'MSDataAnnotation' SubClassOf 'DataAnnotation'
'MSDataAnnotation' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00007 exactly 1 'MSProteinData'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000037
MSDataAnnotationProcessing
'MSDataAnnotationProcessing' SubClassOf 'DataAnnotationProcessing'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000034
ImageSegment
'ImageSegment' SubClassOf http://edamontology.org/data_0006
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000155
RNASample
'RNASample' SubClassOf 'ExtractedSample'
'RNASample' SubClassOf 'producedByExtractionProtocol' exactly 1 'RNAExtraction'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000156
DNASample
'DNASample' SubClassOf 'ExtractedSample'
'DNASample' SubClassOf 'producedByExtractionProtocol' exactly 1 'DNAExtraction'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000032
ImageAcquisitionProtocol
'ImageAcquisitionProtocol' SubClassOf 'DataAcquisitionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000033
ImageData
'ImageData' SubClassOf 'PrimaryData'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000154
ProteinSample
'ProteinSample' SubClassOf 'ExtractedSample'
'ProteinSample' SubClassOf 'producedByExtractionProtocol' exactly 1 'ProteinExtraction'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000007
BioSubject
'BioSubject' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00009
'BioSubject' SubClassOf 'MaterialEntity'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000128
CellCountingProtocol
'CellCountingProtocol' SubClassOf 'DataAcquisitionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000005
BioAggregate
'BioAggregate' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00006 min 1 'BioSubject'
'BioAggregate' SubClassOf 'BioSubject'
'BioAggregate' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00005
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000126
hiSeqProtocol
'hiSeqProtocol' SubClassOf 'NGSProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000006
BioSample
'BioSample' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00010
'BioSample' SubClassOf 'obtainedFromBioSubject' exactly 1 'BioSubject'
'BioSample' SubClassOf 'hasStructure' max 1 http://purl.obolibrary.org/obo/PO_0009011
'BioSample' SubClassOf 'BioSubject'
'BioSample' SubClassOf 'producedByExpTreatment' exactly 1 'ExperimentalTreatment'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000127
NGSDataAnnotationProcessing
'NGSDataAnnotationProcessing' SubClassOf 'DataAnnotationProcessing'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000003
AnalysisProtocol
'AnalysisProtocol' SubClassOf http://edamontology.org/operation_0004
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000124
NGSProtocol
'NGSProtocol' SubClassOf 'SequencingProtocol'
http://purl.obolibrary.org/obo/EO_0007175
http://purl.obolibrary.org/obo/EO_0007175 SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#minCelsius max 1 http://www.w3.org/2001/XMLSchema#decimal
http://purl.obolibrary.org/obo/EO_0007175 SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#maxCelsius max 1 http://www.w3.org/2001/XMLSchema#decimal
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000125
SangerProtocol
'SangerProtocol' SubClassOf 'SequencingProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000001
GelDataForSpots
'GelDataForSpots' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00006 min 1 'SpotSegment'
'GelDataForSpots' SubClassOf 'StructuredImageData'
'GelDataForSpots' SubClassOf 'extractedFromMaterialEntity' exactly 1 'GelForSpots'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000122
NGSData
'NGSData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00008 exactly 1 'NGSProtocol'
'NGSData' SubClassOf 'extractedFromMaterialEntity' exactly 1 ('RNASample' or 'DNASample')
'NGSData' SubClassOf 'SequenceData'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000120
SequenceData
'SequenceData' SubClassOf 'PrimaryData'
'SequenceData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00008 exactly 1 'SequencingProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000121
SangerData
'SangerData' SubClassOf 'extractedFromMaterialEntity' exactly 1 'GelBand'
'SangerData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00008 exactly 1 'SangerProtocol'
'SangerData' SubClassOf 'SequenceData'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00009
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00005
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00004
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00002
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00010
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000018
DevelopmentalStage
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000019
Electrophoresis
'Electrophoresis' SubClassOf 'AnalysisProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000016
DataSubject
'DataSubject' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00009
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000014
DataProcessing
'DataProcessing' SubClassOf http://edamontology.org/operation_0004
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000135
ProteinModificationList
'ProteinModificationList' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00006 min 1 'ProteinModification'
'ProteinModificationList' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00004
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000015
DataAnnotation
'DataAnnotation' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00010
'DataAnnotation' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00008 exactly 1 'DataAnnotationProcessing'
'DataAnnotation' SubClassOf 'DataSample'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000012
DataAcquisitionProtocol
'DataAcquisitionProtocol' SubClassOf http://edamontology.org/operation_0004
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000013
DataAggregate
'DataAggregate' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00006 min 1 'DataSubject'
'DataAggregate' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00005
'DataAggregate' SubClassOf 'DataSubject'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000010
CytologyData
'CytologyData' SubClassOf 'PrimaryData'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000011
DNAExtraction
'DNAExtraction' SubClassOf 'ExtractionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000070
SyntheticProteinModification
'SyntheticProteinModification' SubClassOf 'ProteinModification'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000228
ProteolyticEnzyme
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000069
StructuredImageData
'StructuredImageData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00006 min 1 'ImageSegment'
'StructuredImageData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00008 exactly 1 'ImageAcquisitionProtocol'
'StructuredImageData' SubClassOf 'ImageData'
'StructuredImageData' SubClassOf https://bitbucket.org/PlantExpAssay/ontology/raw/master/PipelinePatterns.owl#PPO:00004
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000223
GelForBands
'GelForBands' SubClassOf 'Gel'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000067
SpotExtraction
'SpotExtraction' SubClassOf 'PhysicalSampleFractioning'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000068
SpotSegment
'SpotSegment' SubClassOf 'ImageSegment'
'SpotSegment' SubClassOf 'refersToSpot' exactly 1 'GelSpot'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000222
GelForSpots
'GelForSpots' SubClassOf 'gelpHStrip' exactly 1 http://www.w3.org/2001/XMLSchema#string
'GelForSpots' SubClassOf 'Gel'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000065
Specimen
'Specimen' SubClassOf 'hasProgeny' max 1 'Specimen'
'Specimen' SubClassOf 'isCloneOf' max 1 'Specimen'
'Specimen' SubClassOf 'BioSubject'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000186
ExperimentalTreatment
'ExperimentalTreatment' SubClassOf http://edamontology.org/operation_0004
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000187
EnvironmentalChange
'EnvironmentalChange' SubClassOf 'ExperimentalTreatment'
'EnvironmentalChange' SubClassOf 'hasGrowthEnvironment' exactly 1 'GrowthEnvironment'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000119
SequencingProtocol
'SequencingProtocol' SubClassOf 'DataAcquisitionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000118
RNALabChip
'RNALabChip' SubClassOf 'BioAnalyzerProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000116
BioAnalyzerData
'BioAnalyzerData' SubClassOf 'PrimaryData'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000113
BioAnalyzerProtocol
'BioAnalyzerProtocol' SubClassOf 'DataAcquisitionProtocol'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000114
ElectropherogramData
'ElectropherogramData' SubClassOf 'BioAnalyzerData'
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000235
InstrumentType
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000112
FixationProtocol
'FixationProtocol' SubClassOf http://edamontology.org/operation_0004
https://bitbucket.org/PlantExpAssay/ontology/raw/master/PlantExperimentalAssayOntology.owl#PEAO:000230
MassSpectrometryInstrument
'MassSpectrometryInstrument' SubClassOf 'hasMassAnalyzerType' some http://purl.obolibrary.org/obo/MS_1000443
'MassSpectrometryInstrument' SubClassOf 'hasSoftware' some http://purl.obolibrary.org/obo/MS_1000531
'MassSpectrometryInstrument' SubClassOf 'hasIonizationType' some http://purl.obolibrary.org/obo/MS_1000008
'MassSpectrometryInstrument' SubClassOf 'hasInstrumentModel' some http://purl.obolibrary.org/obo/MS_1000031