OpenSILEX - Ontology for Experimental Phenotypic Objects (OEPO)
Anne Tireau, Llorenç Cabrera-Bosquet, Pascal Neveu (INRA Montpellier)
Version 3.1 (2018-06-06) created by INRA - MISTEA - LEPSE
INRA MISTEA
Copyright © - INRA - 2014 - 2018
The Object Ontology is licensed by CC 4.0 (http://creativecommons.org/licenses/by-sa/4.0/legalcode)
http://bioportal.bioontology.org/ontologies/versionSubject
releases/2017-12-12
#AccessionName
skos:closeMatch http://www.cropontology.org/rdf/CO_020:0000011
#AccessionName
Accession name
#AccessionName
Nom de l'accession
#AccessionNumber
skos:closeMatch http://www.cropontology.org/rdf/CO_020:0000089
#AccessionNumber
Accession number
#AccessionNumber
Numéro d'accession
#ActiveSpectroradiometer
https://earthobservatory.nasa.gov/Features/RemoteSensing/remote_08.php
#ActiveSpectroradiometer
Active instruments provide their own energy (electromagnetic radiation) to illuminate the object or scene they observe. They send a pulse of energy from the sensor to the object and then receive the radiation that is reflected or backscattered from that object. Scientists use many different types of active remote sensors.
#ActiveSpectroradiometer
Active spectroradiometer
#Actuator
Devices that usually are responsible for moving and controlling a mechanism or system, for example by opening a valve or opening shadows in a greenhouse.
#Actuator
Actionneur
#Actuator
Actuator
#AirConditioning
Aerotherme en chaud ou froid
#AirConditioning
Hot or cold air conditioning system
#AirMixer
Air Mixer
#AirMixer
Brassage air
#Area
Zone au sens large.
Peut définir une zone au sens physique ou théorique
#Area
Area
#Area
Zone
#CO2Sensor
CO2 sensor
#Camera
Camera
#Camera
Caméra
#CapacitanceSensor
certain materials interact with water vapour and undergo a change in capacitance, in relation to ambient humidity.
#CapacitanceSensor
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#CapacitanceSensor
#CapacitanceSensor
Capacitance sensor
#CapacitiveThinFilmPolymer
Certain materials interact with water vapour and undergo a change in capacitance, in relation to ambient humidity.
#CapacitiveThinFilmPolymer
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#CapacitiveThinFilmPolymer
#CapacitiveThinFilmPolymer
Capacitive - thin film polymer
#CarSupport
Car support
#CarSupport
Chariot
#Compartment
Compartiment
#Compartment
Compartment
#ConveyorBelt
Conveyor belt
#ConveyorBelt
Convoyeur
#CupAnemometer
The angular velocity of the cup is directly proportional to the component of the wind speed parallel to the axis of rotation.
#CupAnemometer
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#CupAnemometer
#CupAnemometer
Cup anemometer
#DataFile
Data file
#DataFile
Fichier de données
#DataSet
A MIAPPE-compliant dataset, derived from a study or investigation
#DataSet
skos:exactMatch https://raw.githubusercontent.com/MIAPPE/MIAPPE-ontology/master/PPEO.owl#PPEO_000003
#DataSet
Data set
#Device
Device
#Document
Document
#Document
Document
#Dome
Chapelle
#Dome
Dome
#EarInflorescence
A pistillate inflorescence (PO:0025598) in Zea species that is highly compacted and bears the ear spikelets (PO:0006320) on a lateral inflorescence axis (PO:0020122). [database_cross_reference: MaizeGDB_curator:Leszek_Vincent][database_cross_reference: POC:Laurel_Cooper]
#EarInflorescence
skos:exactMatch http://www.ontobee.org/ontology/rdf/PO?iri=http://purl.obolibrary.org/obo/PO_0020136
#EarInflorescence
Ear inflorescence
#EarInflorescence
Epi
#ElectricalResistanceBlock
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#ElectricalResistanceBlock
#ElectricalResistanceBlock
Electrical resistance block
#ElectricalResistanceHumiditySensor
Certain materials interact with water vapour and undergo a change in electrical resistance, in relation to ambient humidity.
#ElectricalResistanceHumiditySensor
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#ElectricalResistanceHumiditySensor
#ElectricalResistanceHumiditySensor
Electrical resistance humidity sensor
#ElectricalResistanceThermometer
For small temperature changes, the increase in resistance of pure metals is proportional to the change in temperature. Often made in Platinum.
#ElectricalResistanceThermometer
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#ElectricalResistanceThermometer
#ElectricalResistanceThermometer
Electrical resistance thermometer
#EnvironmentFeature
skos:exactMatch http://purl.org/ppeo/PPEO.owl#PPEO_000010
#EnvironmentFeature
Environment feature
#Equipement
An INSTALLATION is the elementary level for data acquisition in a specific type of experiments. It stands for other frequently used terms such as ‘platform’, ‘facility’ or others.
#Equipement
Equipement
#Equipement
Equipement
#EuropeanInfrastructure
The ESFRI listed project EMPHASIS aims at a synergistic development and long-term operation of plant phenotyping infrastructure in Europe (https://emphasis.plant-phenotyping.eu/) by developing tools and methods for multi-scale phenotyping, allowing one to analyze genotype performance and trait diversity in current and future European environmental conditions.
#EuropeanInfrastructure
European Infrastructure
#Experiment
An EXPERIMENT is a planned activity carried out by a given set of persons on a given set of observation unit, like plants or microplots (see §2.1), involving a protocol, methods and a resulting dataset.
#Experiment
EMPHASIS ontology
#Experiment
sko:exactMatch <brapi/v1/studies>
#Experiment
Experiment
#Experiment
Expérimentation
#ExperimentalCondition
A set of environmental conditions, infrastructure and supporting equipment or resources necessary to conduct a given experiment and in which plants, plots or group of plants are raised
#ExperimentalCondition
skos:closeMatch http://www.cropontology.org/rdf/CO_715:0000005
#ExperimentalCondition
skos:closeMatch http://www.ontobee.org/ontology/rdf/PECO?iri=http://purl.obolibrary.org/obo/PECO_0007359
#ExperimentalCondition
Context expérimental
#ExperimentalCondition
Experimental condition
#Fan
Fan
#Fan
Ventilateur
#FiberGlassBlock
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#FiberGlassBlock
#FiberGlassBlock
Fiber-glass block
#Field
Champ
#Field
Field
#FieldExperiment
Field experiment
#FieldRobot
Field robot
#FieldRobot
Phenomobile
#Gantry
Gantry
#Gantry
Portique
#Genus
skos:exactMatch http://www.cropontology.org/rdf/CO_020:0000005
#Genus
Genre
#Genus
Genus
#GermplasmDescriptor
skos:closeMatch http://www.cropontology.org/rdf/CO_020:0000000
#GermplasmDescriptor
Germplasm descriptor information
#Greenhouse
Greenhouse
#Greenhouse
Serre
#GreenhouseExperiment
Greenhouse experiment
#GrippingArm
Bras de préhension
#GrippingArm
Gripping arm
#GrowthChamber
Chambre de culture
#GrowthChamber
Growth chamber
#GrowthChamberExperiment
Growth chamber experiment
#GypsumBlock
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#GypsumBlock
#GypsumBlock
Gypsum block
#HemisphericalCamera
Caméra hémisphérique
#HemisphericalCamera
Hemispherical camera
#HorizontalScreen
Horizontal screen
#HorizontalScreen
Ouvrant horizontal
#HumiditySensor
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#HumiditySensor
#HumiditySensor
Capteur d'humidité
#HumiditySensor
Humidity sensor
#HyperspectralCamera
Caméra hyperspectrale
#HyperspectralCamera
Hyperspectral camera
#ImagingCabin
Imaging cabin
#Infrastructure
Infrastructure
#Infrastructure
Infrastructure
#Installation
An INSTALLATION is the elementary level for data acquisition in a specific type of experiments. It stands for other frequently used terms such as ‘platform’, ‘facility’ or others.
#Installation
Installation
#Installation
Installation
#IrrigationSystem
Irrigation system
#IrrigationSystem
Système d'irrigation
#LabBook
Cahier de laboratoire
#LabBook
Lab book
#Leaf
A phyllome vascular system (PO:0025206) that includes the totality of the portions of vascular tissue in their specific arrangement in a vascular leaf (PO:0009025). [database_cross_reference: POC:Ramona_Walls]
#Leaf
skos:closeMatch http://www.ontobee.org/ontology/rdf/PO?iri=http://purl.obolibrary.org/obo/PO_0000036
#Leaf
Feuille
#Leaf
Leaf
#LevelMeasurementRainGauge
Measuring the water level in a tube
#LevelMeasurementRainGauge
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#LevelMeasurementRainGauge
#LevelMeasurementRainGauge
Level measurement rain gauge
#Lightning
Eclairage
#Lightning
Lightning
#LocalInfrastructure
A LOCAL INFRASTRUCTURE is a group of installations located in one site depending on one institution (or more), which share governance committees, a common (or at least highly interoperable) information system, common principles for cost calculation and pricing and a common tool for user access.
#LocalInfrastructure
Infrastructure locale
#LocalInfrastructure
Local infrastructure
#Method
skos:exactMatch http://purl.org/ppeo/PPEO.owl#PPEO_000011
#Method
Method
#Multimedia
Multimedia
#Multimedia
Multimedia
#NationalInfrastructure
A NATIONAL INFRASTRUCTURE is an organized group of local infrastructures with governance recognised by national authorities (e.g. respective ministry or national structures).
#NationalInfrastructure
Infrastructure nationale
#NationalInfrastructure
National infrastructure
#NetRadiometerOrNetPyrradiometerOrNetExchangeRadiometerOrBalancemeter
Net all-wave radiation (net flux of downward and upward total radiation i.e. solar, terrestrial and atmospheric)
#NetRadiometerOrNetPyrradiometerOrNetExchangeRadiometerOrBalancemeter
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#NetRadiometerOrNetPyrradiometerOrNetExchangeRadiometerOrBalancemeter
#NetRadiometerOrNetPyrradiometerOrNetExchangeRadiometerOrBalancemeter
Net radiometer or net pyrradiometer or net exchange radiometer or balancemeter
#NylonUnits
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#NylonUnits
#NylonUnits
Nylon units
#Observation
skos:exactMatch http://purl.org/ppeo/PPEO.owl#PPEO_000006
#Observation
Observation
#ObservationVariable
skos:exactMatch http://purl.org/ppeo/PPEO.owl#PPEO_000007
#ObservationVariable
Observation variable
#PassiveSpectroradiometer
https://earthobservatory.nasa.gov/Features/RemoteSensing/remote_08.php
#PassiveSpectroradiometer
Passive instruments detect natural energy that is reflected or emitted from the observed scene. Passive instruments sense only radiation emitted by the object being viewed or reflected by the object from a source other than the instrument. Reflected sunlight is the most common external source of radiation sensed by passive instruments. Scientists use a variety of passive remote sensors.
#PassiveSpectroradiometer
Passive spectroradiometer
#Plant
the continuous organism originating from a single seed, callus, rhizome or any other propagation mean
#Plant
skos:closeMatch http://www.ontobee.org/ontology/rdf/PO?iri=http://purl.obolibrary.org/obo/PO_0000003
#Plant
Plant
#Plant
Plante
#PlantGroup
Groupe de plantes
#PlantGroup
Plant group
#Plot
A community of plants located on a defined area of a field.
#Plot
Parcelle
#Plot
Plot
#Pot
Pot de la plante
#Pot
Pot
#Pot
Pot
#PrecipitationSensor
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#PrecipitationSensor
#PrecipitationSensor
Capteur de précipitation
#PrecipitationSensor
Precipitation sensor
#Project
PROJECT (e.g. EU or national projects) involves partners that are in charge of experiments performed in one or more local infrastructures.
#Project
Project
#Project
Projet
#PropellerAnemometer
The angular velocity of the propeller rotor is directly proportional to the component of the wind speed parallel to the axis of rotation.
#PropellerAnemometer
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#PropellerAnemometer
#PropellerAnemometer
Propeller anemometer
#ProtectiveStructure
Protective structure
#ProtectiveStructure
Structure protectrice
#Provider
An organized group of people who perform experiments, usually together with users, handle equipment and uses a dedicated set of pipelines and procedures for the analysis of the data originating from the installation
#Provider
Provider
#Pyranometer
Total solar irradiance on a horizontal surface
#Pyranometer
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#Pyranometer
#Pyranometer
Pyranometer
#PyranometerWithShadeRing
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#PyranometerWithShadeRing
#PyranometerWithShadeRing
Pyranometer with shade ring
#Quality
skos:exactMatch http://purl.org/ppeo/PPEO.owl#PPEO_000008
#Quality
Quality
#QuantumSensor
Measures the PAR directly in the range 0.4 to 0.7 micrometers
#QuantumSensor
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#QuantumSensor
#QuantumSensor
Quantum sensor
#RGBCamera
Caméra RGB
#RGBCamera
RGB camera
#RadiationSensor
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#RadiationSensor
#RadiationSensor
Capteur de rayonnement
#RadiationSensor
Radiation sensor
#Rootstock
Grape variety used as the underground portion of a grafted vine onto which the scion is grafted. Bred to provide pest resistance and/or adaptability to unfavorable soil or environmental conditions.
#Rootstock
Porte-greffe
#Rootstock
Rootstock
#Sample
Sample
#ScientificDocument
Document scientifique
#ScientificDocument
Scientific document
#ScientificObject
Defined in MIAPPE, i.e. the level at which traits are measured, calculated and stored in the information system
#ScientificObject
skos:exactMatch http://purl.org/ppeo/PPEO.owl#PPEO_000005
#ScientificObject
Objet scientifique
#ScientificObject
Scientific object
#Scion
Is the part of the vine, usually Vitis vinifera, that is grafted on the rootstock and from which wine grapes will be harvested from
#Scion
Greffon
#Scion
Scion
#Seed
A multi-tissue plant structure (PO:0025496) that develops from a plant ovule (PO:0020003) and has as parts a plant embryo (PO:0009009) enclosed in a seed coat (PO:0009088). [database_cross_reference: POC:curators]
#Seed
skos:exactMatch http://www.ontobee.org/ontology/rdf/PO?iri=http://purl.obolibrary.org/obo/PO_0009010
#Seed
Graine
#Seed
Seed
#SeedLot
skos:closeMatch http://www.cropontology.org/rdf/CO_020:0000089
#SeedLot
Lot de graine
#SeedLot
Seed lot
#SeedLotSample
Echantillon de lot de graine
#SeedLotSample
Seed lot sample
#SensingDevice
Devices providing numerical data, e.g. environment sensors or cameras
#SensingDevice
Sensing device
#Shadows
Ombrières
#Shadows
Shadows
#Silk
A collective organ part structure (PO:0025269) that has as parts an elongated stigma (PO:0009073) with stigma papilla (GO:0090397), and an elongated style (PO:0009074). [database_cross_reference: MID:21345919][database_cross_reference: POC:Laurel_Cooper]
#Silk
skos:exactMatch http://www.ontobee.org/ontology/rdf/PO?iri=http://purl.obolibrary.org/obo/PO_0006488
#Silk
Silk
#Silk
Soie
#Species
skos:exactMatch http://www.cropontology.org/terms/CO_020:0000006/species
#Species
Espèce
#Species
Species
#Spectroradiometer
https://earthobservatory.nasa.gov/Features/RemoteSensing/remote_08.php
#Spectroradiometer
A radiometer that can measure the intensity of radiation in multiple wavelength bands (i.e., multispectral). Oftentimes the bands are of a high spectral resolution—designed for the remote sensing of specific parameters such as sea surface temperature, cloud characteristics, ocean color, vegetation, trace chemical species in the atmosphere, etc.
#Spectroradiometer
Spectroradiometer
#SubProject
Sous-projet
#SubProject
Sub-project
#SurfaceTemperatureRadiometer
Measurements of infra-red radiation emitted from near or remote surfaces
#SurfaceTemperatureRadiometer
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#SurfaceTemperatureRadiometer
#SurfaceTemperatureRadiometer
Surface temperature radiometer
#TechnicalDocument
Document technique
#TechnicalDocument
Technical document
#TemperatureSensor
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#TemperatureSensor
#TemperatureSensor
Capteur de température
#TemperatureSensor
Temperature sensor
#Tensiometer
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#Tensiometer
#Tensiometer
Tensiometer
#Thermistor
Based on the variation of resistance of a semiconductor with a relatively large temperature coefficient of resistance, either positive (PTC) or negative (NTC) depending upon the actual material
#Thermistor
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#Thermistor
#Thermistor
Thermistor
#Thermocouple
Based on the generation of an electromotive force at the junction between two metals in contact, which is function of the temperature of the two metals
#Thermocouple
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#Thermocouple
#Thermocouple
Thermocouple
#Trait
skos:exactMatch http://purl.org/ppeo/PPEO.owl#PPEO_000009
#Trait
Trait
#Treatment
skos:exactMatch http://purl.org/ppeo/PPEO.owl#PPEO_000018
#Treatment
Traitement
#Treatment
Treatment
#UAV
Unmanned Aerial Vehicle (UAV), commonly known as a drone
#UAV
Drône
#UAV
Unmanned Aerial Vehicle
#UltrasonicWindSensor
A sonic signal is emitted by sensor transducers
#UltrasonicWindSensor
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#SonicRanging
#UltrasonicWindSensor
Ultrasonic wind sensor
#Unit
http://purl.org/ppeo/PPEO.owl#PPEO_000012
#Unit
Unit
#Variety
skos:closeMatch http://aims.fao.org/aos/agrovoc/c_1423211760123.rdf
#Variety
Variety
#Variety
Variété
#Vector
Devices that either transport plants to a given site for phenotyping, or carry sensors in a greenhouse (e.g. conveyor belt, gripping arm, robot) or in the field (e.g. UAV, gantry, field robot). By extension, a vector can also be a group of persons producing manual observations.
#Vector
Vecteur
#Vector
Vector
#WeighingScale
Balance
#WeighingScale
Weighing scale
#WindSensor
skos:exactMatch http://purl.oclc.org/NET/ssnx/meteo/aws#WindSensor
#WindSensor
Anémomètre
#WindSensor
Wind sensor
#hasAcronym
Acronyme
#hasAcronym
has acronym
#hasAdministrativeContact
Contact administratif
#hasAdministrativeContact
has administrative contact
#hasAlias
Alias
#hasAlias
Alias
#hasCarNumber
Car number
#hasCarNumber
Numéro du chariot
#hasContact
Contact
#hasContact
Correspondant
#hasDate
Date
#hasDate
Date
#hasDescription
Description
#hasDescription
Description
#hasEndDate
Date de fin
#hasEndDate
End date
#hasFilePath
Chemin du fichier
#hasFilePath
File path
#hasFinancialName
Financial code
#hasFinancialName
Financeur
#hasFinancialName
Has financial name
#hasFinancialSupport
Financial support
#hasFinancialSupport
Type de financement
#hasGeometry
http://www.opengis.net/ont/geosparql#hasGeometry
#hasInitialPosition
Initial position
#hasInitialPosition
Position initiale
#hasKeywords
Keywords
#hasKeywords
Mot-clés
#hasMethod
http://purl.org/ppeo/PPEO.owl#hasMethod
#hasMethod
has method
#hasName
has name
#hasName
nom
#hasObjective
objective
#hasObservation
has observation
#hasObservation
observation
#hasPart
a pour part
#hasPart
has part
#hasParticipant
http://www.ontobee.org/ontology/rdf/RO?iri=http://purl.obolibrary.org/obo/RO_0000057
#hasParticipant
has participant
#hasProjectCoordinator
Coordinateur
#hasProjectCoordinator
Coordinator
#hasQuality
http://purl.org/ppeo/PPEO.owl#hasMethod
#hasQuality
has quality
#hasRepetition
Repetition
#hasRepetition
Répétition
#hasScientificContact
Contact scientifique
#hasScientificContact
Scientific contact
#hasScientificSupervisor
has scientific supervisor
#hasSeedLot
Lot de graine
#hasSeedLot
Seed lot
#hasSeedLotSample
Echantillon de lot de semence
#hasSeedLotSample
Seed lot sample
#hasStartDate
Date de début
#hasStartDate
Start date
#hasTagPattern
Alias description
#hasTagPattern
Modèle de code barre
#hasTagPattern
Tag pattern
#hasTechnicalContact
Contact technique
#hasTechnicalContact
Technical contact
#hasTechnicalSupervisor
has technical supervisor
#hasTreatment
Traitement
#hasTreatment
has treatment
#hasTreatmentFactor
Facteur
#hasTreatmentFactor
has treatment factor
#hasTreatmentModality
Modalité
#hasTreatmentModality
has treatment modality
#hasUnit
http://purl.org/ppeo/PPEO.owl#hasScale
#hasUnit
has unit
#hasValue
Valeur
#hasValue
has value
#hasVariable
http://purl.org/ppeo/PPEO.owl#hasVariable
#hasVariable
Variable
#hasVariable
has variable
#hasVariety
Variety
#hasWebsite
Site web
#hasWebsite
has website
#isPartOf
est partie de
#isPartOf
is part of
#maxInclusive
skos:exactMatch <https://www.w3.org/TR/xmlschema-2/#rf-maxInclusive>
#minInclusive
skos:exactMatch https://www.w3.org/TR/xmlschema-2/#rf-minInclusive
#participatesIn
http://www.ontobee.org/ontology/rdf/RO?iri=http://purl.obolibrary.org/obo/RO_0000056
#participatesIn
participates in
#participatesIn
participe à
#sfContains
http://www.opengis.net/ont/geosparql#sfContains
#uses
uses
#uses
utilise
http://www.w3.org/2004/02/skos/core#broadMatch
has broader match
http://www.w3.org/2004/02/skos/core#closeMatch
has close match
http://www.w3.org/2004/02/skos/core#exactMatch
has exact match
http://www.w3.org/2004/02/skos/core#narrowMatch
has narrower match
http://www.w3.org/2004/02/skos/core#relatedMatch
has related match
foaf:Agent
Agent