39
14
0
http://edamontology.org/operation_3430
Nucleic acid sequence feature detection
'Nucleic acid sequence feature detection' SubClassOf 'Nucleic acid feature detection'
'Nucleic acid sequence feature detection' SubClassOf 'Sequence feature detection'
'Nucleic acid sequence feature detection' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass
http://edamontology.org/operation_0304
Metadata retrieval
'Metadata retrieval' SubClassOf 'has output' some 'Resource metadata'
'Metadata retrieval' SubClassOf 'Data retrieval'
'Metadata retrieval' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass
http://edamontology.org/topic_2818
Eukaryotes
'Eukaryotes' SubClassOf 'Model organisms'
'Eukaryotes' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass
http://edamontology.org/topic_2815
Humans
'Humans' SubClassOf 'Vertebrates'
'Humans' SubClassOf 'Biology'
http://edamontology.org/topic_2819
Invertebrates
'Invertebrates' SubClassOf 'Animals'
'Invertebrates' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass
http://edamontology.org/operation_0484
SNP detection
'SNP detection' SubClassOf 'Nucleic acid sequence feature detection'
'SNP detection' SubClassOf 'Nucleic acid feature detection'
http://edamontology.org/topic_2821
Unicellular eukaryotes
'Unicellular eukaryotes' SubClassOf 'Eukaryotes'
'Unicellular eukaryotes' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass
http://edamontology.org/topic_2820
Vertebrates
'Vertebrates' SubClassOf 'Animals'
'Vertebrates' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass
http://edamontology.org/topic_0213
Mice or rats
'Mice or rats' SubClassOf 'Vertebrates'
'Mice or rats' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass
http://edamontology.org/operation_0422
Protein cleavage site prediction
'Protein cleavage site prediction' SubClassOf 'Protein sequence feature detection'
'Protein cleavage site prediction' SubClassOf 'Protein feature detection'
http://edamontology.org/operation_0421
Protein folding site prediction
'Protein folding site prediction' SubClassOf 'Protein sequence feature detection'
'Protein folding site prediction' SubClassOf 'Protein feature detection'
http://edamontology.org/operation_0427
Transposon prediction
'Transposon prediction' SubClassOf 'Nucleic acid sequence feature detection'
'Transposon prediction' SubClassOf 'Nucleic acid feature detection'
http://edamontology.org/operation_0417
Protein post-translation modification site prediction
'Protein post-translation modification site prediction' SubClassOf 'Protein sequence feature detection'
'Protein post-translation modification site prediction' SubClassOf 'Protein feature detection'
http://edamontology.org/operation_0418
Protein signal peptide detection
'Protein signal peptide detection' SubClassOf 'Protein sequence feature detection'
'Protein signal peptide detection' SubClassOf 'Protein feature detection'
http://edamontology.org/operation_0433
Splice site prediction
'Splice site prediction' SubClassOf 'Nucleic acid sequence feature detection'
'Splice site prediction' SubClassOf 'Nucleic acid feature detection'
http://edamontology.org/operation_0431
Restriction site recognition
'Restriction site recognition' SubClassOf 'Nucleic acid sequence feature detection'
'Restriction site recognition' SubClassOf 'Nucleic acid feature detection'
http://edamontology.org/operation_0432
Nucleosome formation or exclusion sequence prediction
'Nucleosome formation or exclusion sequence prediction' SubClassOf 'Nucleic acid sequence feature detection'
'Nucleosome formation or exclusion sequence prediction' SubClassOf 'Nucleic acid feature detection'
http://edamontology.org/operation_0430
CpG island and isochore detection
'CpG island and isochore detection' SubClassOf 'Nucleic acid sequence feature detection'
'CpG island and isochore detection' SubClassOf 'Nucleic acid feature detection'
http://edamontology.org/operation_0428
PolyA signal detection
'PolyA signal detection' SubClassOf 'Nucleic acid sequence feature detection'
'PolyA signal detection' SubClassOf 'Nucleic acid feature detection'
http://edamontology.org/operation_0429
Quadruplex formation site detection
'Quadruplex formation site detection' SubClassOf 'Nucleic acid sequence feature detection'
'Quadruplex formation site detection' SubClassOf 'Nucleic acid feature detection'
http://edamontology.org/operation_0411
Protein signal peptide detection (eukaryotes)
'Protein signal peptide detection (eukaryotes)' SubClassOf 'Protein signal peptide detection'
'Protein signal peptide detection (eukaryotes)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass
http://edamontology.org/operation_0412
Protein signal peptide detection (bacteria)
'Protein signal peptide detection (bacteria)' SubClassOf 'Protein signal peptide detection'
'Protein signal peptide detection (bacteria)' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass
http://edamontology.org/operation_0416
Epitope mapping
'Epitope mapping' SubClassOf 'Protein sequence feature detection'
'Epitope mapping' SubClassOf 'Protein feature detection'
http://edamontology.org/operation_3223
Differential gene expression analysis
'Differential gene expression analysis' SubClassOf 'Differential gene expression analysis'
http://edamontology.org/operation_3222
Peak calling
'Peak calling' SubClassOf 'Nucleic acid sequence feature detection'
'Peak calling' SubClassOf 'Nucleic acid feature detection'
http://edamontology.org/operation_3197
Genetic variation analysis
'Genetic variation analysis' SubClassOf 'Nucleic acid sequence feature detection'
'Genetic variation analysis' SubClassOf 'Nucleic acid feature detection'
http://edamontology.org/operation_0242
Conserved transcription regulatory sequence identification
'Conserved transcription regulatory sequence identification' SubClassOf 'Nucleic acid sequence feature detection'
'Conserved transcription regulatory sequence identification' SubClassOf 'Nucleic acid feature detection'
http://edamontology.org/operation_3289
ID retrieval
'ID retrieval' SubClassOf 'has output' some 'Identifier'
'ID retrieval' SubClassOf 'Metadata retrieval'
'ID retrieval' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass
http://edamontology.org/topic_0781
Viruses
'Viruses' SubClassOf 'Model organisms'
'Viruses' SubClassOf 'Biology'
http://edamontology.org/topic_0782
Fungi
'Fungi' SubClassOf 'Eukaryotes'
'Fungi' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass
http://edamontology.org/topic_0780
Plants
'Plants' SubClassOf 'Eukaryotes'
'Plants' SubClassOf 'Biology'
http://edamontology.org/topic_0783
Pathogens
'Pathogens' SubClassOf 'Model organisms'
'Pathogens' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass
http://edamontology.org/operation_3087
Protein sequence feature detection
'Protein sequence feature detection' SubClassOf 'Sequence feature detection'
'Protein sequence feature detection' SubClassOf 'Protein sequence analysis'
'Protein sequence feature detection' SubClassOf 'Protein feature detection'
'Protein sequence feature detection' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass
http://edamontology.org/topic_1811
Prokaryotes and Archaea
'Prokaryotes and Archaea' SubClassOf 'Model organisms'
'Prokaryotes and Archaea' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass
http://edamontology.org/operation_3630
Protein quantification
'Protein quantification' SubClassOf http://edamontology.org/operation_3799
http://edamontology.org/operation_3742
Differential gene expression analysis
'Differential gene expression analysis' SubClassOf 'Comparison'
'Differential gene expression analysis' SubClassOf http://www.w3.org/2002/07/owl#DeprecatedClass
http://edamontology.org/operation_3741
Differential protein expression analysis
'Differential protein expression analysis' SubClassOf 'Differential gene expression analysis'
'Differential protein expression analysis' SubClassOf 'Differential gene expression analysis'
http://edamontology.org/operation_2454
Gene prediction
'Gene prediction' SubClassOf 'Nucleic acid sequence feature detection'
'Gene prediction' SubClassOf 'Nucleic acid feature detection'
http://edamontology.org/topic_3500
Animals
'Animals' SubClassOf 'Eukaryotes'
'Animals' SubClassOf 'Biology'
http://edamontology.org/format_3804
xsd
'xsd' SubClassOf 'XML'
http://edamontology.org/topic_3796
Population genomics
'Population genomics' SubClassOf 'Genomics'
http://edamontology.org/topic_3794
RNA immunoprecipitation
'RNA immunoprecipitation' SubClassOf 'Immunoprecipitation experiment'
http://edamontology.org/operation_3800
RNA-Seq quantification
'RNA-Seq quantification' SubClassOf 'Quantification'
http://edamontology.org/operation_3803
Natural product identification
'Natural product identification' SubClassOf 'Spectral analysis'
http://edamontology.org/operation_3802
Sorting
'Sorting' SubClassOf 'Data handling'
http://edamontology.org/operation_3801
Spectral library search
'Spectral library search' SubClassOf 'has input' some 'Mass spectrometry spectra'
'Spectral library search' SubClassOf 'Peptide identification'
http://edamontology.org/operation_3799
Quantification
'Quantification' SubClassOf 'Operation'
http://edamontology.org/operation_3798
Read binning
'Read binning' SubClassOf 'Nucleic acid sequence analysis'
http://edamontology.org/operation_3797
Rarefaction
'Rarefaction' SubClassOf 'Operation'
http://edamontology.org/operation_3792
miRNA analysis
'miRNA analysis' SubClassOf 'Gene expression analysis'
http://edamontology.org/operation_3791
Collapsing methods
'Collapsing methods' SubClassOf 'Genetic variation analysis'
http://edamontology.org/operation_3795
In vitro selection
'In vitro selection' SubClassOf 'Nucleic acid design'
http://edamontology.org/operation_3793
Read summarisation
'Read summarisation' SubClassOf 'Nucleic acid sequence analysis'